RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 DDX54Q8TDD1 881 aaKnown RBP12.98□□□□□ -0.33
DDB1-202ENST00000414411 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
DDB1-202ENST00000414411 EP400Q96L91 3159 aa12.96□□□□□ -0.33
DDB1-202ENST00000414411 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.33
DDB1-202ENST00000414411 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
DDB1-202ENST00000414411 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.33
DDB1-202ENST00000414411 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
DDB1-202ENST00000414411 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 PDE3BQ13370 1112 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 DCTN1Q14203 1278 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 MCM10Q7L590 875 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 DCAF5Q96JK2 942 aa12.96□□□□□ -0.34
DDB1-202ENST00000414411 A0A0G2JS52 829 aa12.95□□□□□ -0.34
DDB1-202ENST00000414411 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
DDB1-202ENST00000414411 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
DDB1-202ENST00000414411 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
DDB1-202ENST00000414411 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
DDB1-202ENST00000414411 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
DDB1-202ENST00000414411 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
DDB1-202ENST00000414411 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
DDB1-202ENST00000414411 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
DDB1-202ENST00000414411 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
DDB1-202ENST00000414411 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
DDB1-202ENST00000414411 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
DDB1-202ENST00000414411 BCL9O00512 1426 aa12.93□□□□□ -0.34
DDB1-202ENST00000414411 RGS12O14924 1447 aa12.93□□□□□ -0.34
DDB1-202ENST00000414411 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
DDB1-202ENST00000414411 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
DDB1-202ENST00000414411 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
DDB1-202ENST00000414411 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
DDB1-202ENST00000414411 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
DDB1-202ENST00000414411 IL16Q14005 1332 aa12.91□□□□□ -0.34
DDB1-202ENST00000414411 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
DDB1-202ENST00000414411 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
DDB1-202ENST00000414411 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
DDB1-202ENST00000414411 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
DDB1-202ENST00000414411 CHL1O00533 1208 aa12.9□□□□□ -0.35
DDB1-202ENST00000414411 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.35
DDB1-202ENST00000414411 GOLGA2Q08379 1002 aa12.9□□□□□ -0.35
DDB1-202ENST00000414411 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.35
DDB1-202ENST00000414411 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.35
DDB1-202ENST00000414411 CFAP44Q96MT7 982 aa12.9□□□□□ -0.35
DDB1-202ENST00000414411 MRC1P22897 1456 aa12.89□□□□□ -0.35
DDB1-202ENST00000414411 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
DDB1-202ENST00000414411 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
DDB1-202ENST00000414411 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
DDB1-202ENST00000414411 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
DDB1-202ENST00000414411 ITGB4P16144 1822 aa12.89□□□□□ -0.35
DDB1-202ENST00000414411 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 TEFQ10587 303 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
DDB1-202ENST00000414411 CABP4P57796 275 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 GNAI1P63096 354 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
DDB1-202ENST00000414411 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
DDB1-202ENST00000414411 PIGBQ92521 554 aa12.87□□□□□ -0.35
DDB1-202ENST00000414411 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
DDB1-202ENST00000414411 E9PSI1 815 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 KCNQ2O43526 872 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
DDB1-202ENST00000414411 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
DDB1-202ENST00000414411 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
DDB1-202ENST00000414411 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
DDB1-202ENST00000414411 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
DDB1-202ENST00000414411 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
DDB1-202ENST00000414411 KCNQ3O43525 872 aa12.84□□□□□ -0.35
DDB1-202ENST00000414411 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
DDB1-202ENST00000414411 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
DDB1-202ENST00000414411 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
DDB1-202ENST00000414411 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
DDB1-202ENST00000414411 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
DDB1-202ENST00000414411 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
DDB1-202ENST00000414411 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
DDB1-202ENST00000414411 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
DDB1-202ENST00000414411 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
DDB1-202ENST00000414411 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
DDB1-202ENST00000414411 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
DDB1-202ENST00000414411 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
DDB1-202ENST00000414411 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
DDB1-202ENST00000414411 PAPPAQ13219 1627 aa12.81□□□□□ -0.36
DDB1-202ENST00000414411 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
DDB1-202ENST00000414411 BTAF1O14981 1849 aa12.8□□□□□ -0.36
DDB1-202ENST00000414411 TRIM37O94972 964 aa12.8□□□□□ -0.36
DDB1-202ENST00000414411 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
DDB1-202ENST00000414411 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
DDB1-202ENST00000414411 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
DDB1-202ENST00000414411 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
DDB1-202ENST00000414411 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
DDB1-202ENST00000414411 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
DDB1-202ENST00000414411 KRT24Q2M2I5 525 aa12.79□□□□□ -0.36
DDB1-202ENST00000414411 TTC5Q8N0Z6 440 aa12.79□□□□□ -0.36
DDB1-202ENST00000414411 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
DDB1-202ENST00000414411 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms