RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 GOLGA6L3A6NEY3 463 aa25.68■■□□□ 1.7
SPRN-201ENST00000414069 RBM25P49756 843 aaKnown RBP25.68■■□□□ 1.7
SPRN-201ENST00000414069 LRRFIP2Q9Y608 721 aaKnown RBP25.68■■□□□ 1.7
SPRN-201ENST00000414069 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
SPRN-201ENST00000414069 ZC3H6P61129 1189 aaKnown RBP25.67■■□□□ 1.7
SPRN-201ENST00000414069 CCDC30Q5VVM6 783 aa25.67■■□□□ 1.7
SPRN-201ENST00000414069 CHMP5Q9NZZ3 219 aa25.67■■□□□ 1.7
SPRN-201ENST00000414069 TAF7Q15545 349 aaPredicted RBP25.66■■□□□ 1.7
SPRN-201ENST00000414069 FER1L4A9Z1Z3 1794 aa25.66■■□□□ 1.7
SPRN-201ENST00000414069 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
SPRN-201ENST00000414069 MAP4K4O95819 1239 aaPredicted RBP25.65■■□□□ 1.7
SPRN-201ENST00000414069 MCM4P33991 863 aa25.65■■□□□ 1.7
SPRN-201ENST00000414069 GNAI2P04899 355 aa25.65■■□□□ 1.7
SPRN-201ENST00000414069 NOL8Q76FK4 1167 aaKnown RBP25.65■■□□□ 1.7
SPRN-201ENST00000414069 TOPAZ1Q8N9V7 1692 aa25.65■■□□□ 1.7
SPRN-201ENST00000414069 KDRP35968 1356 aa25.64■■□□□ 1.7
SPRN-201ENST00000414069 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
SPRN-201ENST00000414069 PIK3C2AO00443 1686 aa25.64■■□□□ 1.7
SPRN-201ENST00000414069 SLIT1O75093 1534 aa25.64■■□□□ 1.69
SPRN-201ENST00000414069 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
SPRN-201ENST00000414069 TRIM6-TRIM34B2RNG4 842 aa25.63■■□□□ 1.69
SPRN-201ENST00000414069 MAP3K5Q99683 1374 aa25.62■■□□□ 1.69
SPRN-201ENST00000414069 PRAMEF22A3QJZ6 481 aa25.62■■□□□ 1.69
SPRN-201ENST00000414069 CCT4P50991 539 aaKnown RBP25.62■■□□□ 1.69
SPRN-201ENST00000414069 HMMRO75330 724 aa25.61■■□□□ 1.69
SPRN-201ENST00000414069 CHPF2Q9P2E5 772 aa25.61■■□□□ 1.69
SPRN-201ENST00000414069 TEFQ10587 303 aa25.61■■□□□ 1.69
SPRN-201ENST00000414069 FOXD4L5Q5VV16 416 aaPredicted RBP25.59■■□□□ 1.69
SPRN-201ENST00000414069 NUTM1Q86Y26 1132 aa25.59■■□□□ 1.69
SPRN-201ENST00000414069 FOXD4L4Q8WXT5 416 aaPredicted RBP25.59■■□□□ 1.69
SPRN-201ENST00000414069 IP6K1Q92551 441 aa25.59■■□□□ 1.69
SPRN-201ENST00000414069 GCP02774 474 aa25.58■■□□□ 1.69
SPRN-201ENST00000414069 AXIN2Q9Y2T1 843 aa25.58■■□□□ 1.69
SPRN-201ENST00000414069 TNPO1Q92973 898 aaKnown RBP25.57■■□□□ 1.68
SPRN-201ENST00000414069 PDE1AP54750 535 aa25.57■■□□□ 1.68
SPRN-201ENST00000414069 PROSER2Q86WR7 435 aaPredicted RBP25.57■■□□□ 1.68
SPRN-201ENST00000414069 PI4KAP2A4QPH2 592 aa25.57■■□□□ 1.68
SPRN-201ENST00000414069 UBTFL1P0CB47 393 aaPredicted RBP25.57■■□□□ 1.68
SPRN-201ENST00000414069 PI4KAP1Q8N8J0 262 aa25.57■■□□□ 1.68
SPRN-201ENST00000414069 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
SPRN-201ENST00000414069 BTBD11A6QL63 1104 aa25.56■■□□□ 1.68
SPRN-201ENST00000414069 K7ELQ4 463 aaPredicted RBP25.56■■□□□ 1.68
SPRN-201ENST00000414069 TRAK2O60296 914 aa25.56■■□□□ 1.68
SPRN-201ENST00000414069 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
SPRN-201ENST00000414069 USP44Q9H0E7 712 aa25.56■■□□□ 1.68
SPRN-201ENST00000414069 NBPF7P0C2Y1 421 aaPredicted RBP25.55■■□□□ 1.68
SPRN-201ENST00000414069 SSFA2P28290 1259 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 ERBB4Q15303 1308 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 SURF6O75683 361 aaKnown RBP25.54■■□□□ 1.68
SPRN-201ENST00000414069 CHAMP1Q96JM3 812 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 USP26Q9BXU7 913 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 LRRCC1Q9C099 1032 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 RGPD1P0DJD0 1748 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 NALCNQ8IZF0 1738 aa25.54■■□□□ 1.68
SPRN-201ENST00000414069 PIP4K2AP48426 406 aaPredicted RBP25.53■■□□□ 1.68
SPRN-201ENST00000414069 UNC5CLQ8IV45 518 aa25.53■■□□□ 1.68
SPRN-201ENST00000414069 ANKRD24Q8TF21 1146 aa25.52■■□□□ 1.68
SPRN-201ENST00000414069 ESPNB1AK53 854 aa25.52■■□□□ 1.68
SPRN-201ENST00000414069 PROSER3Q2NL68 480 aa25.52■■□□□ 1.68
SPRN-201ENST00000414069 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
SPRN-201ENST00000414069 CASC1Q6TDU7 716 aa25.51■■□□□ 1.67
SPRN-201ENST00000414069 GNAI3P08754 354 aa25.51■■□□□ 1.67
SPRN-201ENST00000414069 PKP1Q13835 747 aa25.51■■□□□ 1.67
SPRN-201ENST00000414069 PPP1R42Q7Z4L9 355 aa25.51■■□□□ 1.67
SPRN-201ENST00000414069 C1orf141Q5JVX7 400 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 FMN2Q9NZ56 1722 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 SRGAP3O43295 1099 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 DTNBO60941 627 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 EIF4A1P60842 406 aaKnown RBP25.5■■□□□ 1.67
SPRN-201ENST00000414069 SNX21Q969T3 373 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 ANO2Q9NQ90 1003 aa25.5■■□□□ 1.67
SPRN-201ENST00000414069 KIF24Q5T7B8 1368 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 MX1P20591 662 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 KRT28Q7Z3Y7 464 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 SRCIN1Q9C0H9 1055 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 NLRP2Q9NX02 1062 aa25.49■■□□□ 1.67
SPRN-201ENST00000414069 ZGPATQ8N5A5 531 aaKnown RBP25.48■■□□□ 1.67
SPRN-201ENST00000414069 TRIM44Q96DX7 344 aaPredicted RBP25.48■■□□□ 1.67
SPRN-201ENST00000414069 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
SPRN-201ENST00000414069 HTATSF1O43719 755 aaKnown RBP25.48■■□□□ 1.67
SPRN-201ENST00000414069 ATP8B2P98198 1209 aa25.48■■□□□ 1.67
SPRN-201ENST00000414069 OS9Q13438 667 aaPredicted RBP25.47■■□□□ 1.67
SPRN-201ENST00000414069 CWF19L2Q2TBE0 894 aaKnown RBP25.47■■□□□ 1.67
SPRN-201ENST00000414069 FOXD4L6Q3SYB3 417 aaPredicted RBP25.47■■□□□ 1.67
SPRN-201ENST00000414069 TPRNQ4KMQ1 711 aa25.47■■□□□ 1.67
SPRN-201ENST00000414069 FOXD4L3Q6VB84 417 aaPredicted RBP25.47■■□□□ 1.67
SPRN-201ENST00000414069 JARID2Q92833 1246 aaPredicted RBP25.46■■□□□ 1.67
SPRN-201ENST00000414069 AK9Q5TCS8 1911 aa25.46■■□□□ 1.67
SPRN-201ENST00000414069 NWD1Q149M9 1564 aa25.45■■□□□ 1.66
SPRN-201ENST00000414069 PLEKHO1Q53GL0 409 aaPredicted RBP25.45■■□□□ 1.66
SPRN-201ENST00000414069 KCNH5Q8NCM2 988 aa25.45■■□□□ 1.66
SPRN-201ENST00000414069 XRN1Q8IZH2 1706 aaKnown RBP25.44■■□□□ 1.66
SPRN-201ENST00000414069 IL25Q9H293 177 aa25.44■■□□□ 1.66
SPRN-201ENST00000414069 PDCL3Q9H2J4 239 aa25.44■■□□□ 1.66
SPRN-201ENST00000414069 ERC2O15083 957 aa25.44■■□□□ 1.66
SPRN-201ENST00000414069 CSB-PGBD3P0DP91 1061 aa25.44■■□□□ 1.66
SPRN-201ENST00000414069 MYL6BP14649 208 aa25.44■■□□□ 1.66
SPRN-201ENST00000414069 LARP6Q9BRS8 491 aaKnown RBP25.44■■□□□ 1.66
SPRN-201ENST00000414069 UPF3BQ9BZI7 483 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms