RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 LGR6Q9HBX8 967 aa35.42■■■■□ 3.26
VEGFA-207ENST00000413642 C5P01031 1676 aa35.42■■■■□ 3.26
VEGFA-207ENST00000413642 CFAP53Q96M91 514 aa35.41■■■■□ 3.26
VEGFA-207ENST00000413642 RBM42Q9BTD8 480 aaKnown RBP35.4■■■■□ 3.26
VEGFA-207ENST00000413642 AK7Q96M32 723 aa35.39■■■■□ 3.26
VEGFA-207ENST00000413642 ARXQ96QS3 562 aa35.39■■■■□ 3.26
VEGFA-207ENST00000413642 FHDC1Q9C0D6 1143 aaPredicted RBP35.39■■■■□ 3.26
VEGFA-207ENST00000413642 QSER1Q2KHR3 1735 aa35.39■■■■□ 3.26
VEGFA-207ENST00000413642 C4BP0C0L5 1744 aa35.37■■■■□ 3.25
VEGFA-207ENST00000413642 TAF1LQ8IZX4 1826 aa35.35■■■■□ 3.25
VEGFA-207ENST00000413642 RNMTO43148 476 aaKnown RBP35.35■■■■□ 3.25
VEGFA-207ENST00000413642 PHF14O94880 888 aa35.35■■■■□ 3.25
VEGFA-207ENST00000413642 MSL1Q68DK7 614 aa35.35■■■■□ 3.25
VEGFA-207ENST00000413642 HMGB2P26583 209 aaKnown RBP35.34■■■■□ 3.25
VEGFA-207ENST00000413642 PTCD1O75127 700 aaKnown RBP35.33■■■■□ 3.25
VEGFA-207ENST00000413642 SYT17Q9BSW7 474 aa35.33■■■■□ 3.25
VEGFA-207ENST00000413642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.31■■■■□ 3.24
VEGFA-207ENST00000413642 POLD1P28340 1107 aa35.31■■■■□ 3.24
VEGFA-207ENST00000413642 FLAD1Q8NFF5 587 aa35.31■■■■□ 3.24
VEGFA-207ENST00000413642 SLC52A2Q9HAB3 445 aa35.31■■■■□ 3.24
VEGFA-207ENST00000413642 PRKAR2BP31323 418 aa35.3■■■■□ 3.24
VEGFA-207ENST00000413642 DDX10Q13206 875 aaKnown RBP35.3■■■■□ 3.24
VEGFA-207ENST00000413642 PHACTR3Q96KR7 559 aa35.3■■■■□ 3.24
VEGFA-207ENST00000413642 RSPH6AQ9H0K4 717 aa35.3■■■■□ 3.24
VEGFA-207ENST00000413642 GNPATO15228 680 aa35.29■■■■□ 3.24
VEGFA-207ENST00000413642 NUDCQ9Y266 331 aa35.29■■■■□ 3.24
VEGFA-207ENST00000413642 U2AF1L5P0DN76 240 aaPredicted RBP35.28■■■■□ 3.24
VEGFA-207ENST00000413642 U2AF1Q01081 240 aaKnown RBP eCLIP35.28■■■■□ 3.242e-10■□□□□ 9.4
VEGFA-207ENST00000413642 KLHL34Q8N239 644 aa35.27■■■■□ 3.24
VEGFA-207ENST00000413642 SLC39A6Q13433 755 aa35.25■■■■□ 3.23
VEGFA-207ENST00000413642 SCN11AQ9UI33 1791 aa35.24■■■■□ 3.23
VEGFA-207ENST00000413642 SSFA2P28290 1259 aa35.24■■■■□ 3.23
VEGFA-207ENST00000413642 GAS2L2Q8NHY3 880 aa35.24■■■■□ 3.23
VEGFA-207ENST00000413642 IL17REQ8NFR9 667 aa35.22■■■■□ 3.23
VEGFA-207ENST00000413642 COL24A1Q17RW2 1714 aa35.21■■■■□ 3.23
VEGFA-207ENST00000413642 MAP3K5Q99683 1374 aa35.21■■■■□ 3.23
VEGFA-207ENST00000413642 MRC1P22897 1456 aa35.21■■■■□ 3.23
VEGFA-207ENST00000413642 GNAT3A8MTJ3 354 aa35.2■■■■□ 3.23
VEGFA-207ENST00000413642 UBR3Q6ZT12 1888 aa35.2■■■■□ 3.22
VEGFA-207ENST00000413642 RC3H1Q5TC82 1133 aaKnown RBP35.18■■■■□ 3.22
VEGFA-207ENST00000413642 CNTNAP4Q9C0A0 1308 aa35.17■■■■□ 3.22
VEGFA-207ENST00000413642 RTCBQ9Y3I0 505 aaKnown RBP35.17■■■■□ 3.22
VEGFA-207ENST00000413642 ADAMTS7Q9UKP4 1686 aa35.17■■■■□ 3.22
VEGFA-207ENST00000413642 FCHSD2O94868 740 aa35.16■■■■□ 3.22
VEGFA-207ENST00000413642 DNAJC10Q8IXB1 793 aa35.16■■■■□ 3.22
VEGFA-207ENST00000413642 ZNF831Q5JPB2 1677 aa35.14■■■■□ 3.22
VEGFA-207ENST00000413642 DCAF8L1A6NGE4 600 aa35.14■■■■□ 3.22
VEGFA-207ENST00000413642 RPS6KA4O75676 772 aa35.14■■■■□ 3.22
VEGFA-207ENST00000413642 CRKLP46109 303 aaKnown RBP35.14■■■■□ 3.22
VEGFA-207ENST00000413642 TRAPPC3LQ5T215 181 aa35.14■■■■□ 3.22
VEGFA-207ENST00000413642 NLGN2Q8NFZ4 835 aa35.14■■■■□ 3.22
VEGFA-207ENST00000413642 ARHGEF1Q92888 912 aaKnown RBP35.13■■■■□ 3.21
VEGFA-207ENST00000413642 TEFQ10587 303 aa35.11■■■■□ 3.21
VEGFA-207ENST00000413642 COL5A3P25940 1745 aaPredicted RBP35.1■■■■□ 3.21
VEGFA-207ENST00000413642 RALBP1Q15311 655 aa35.1■■■■□ 3.21
VEGFA-207ENST00000413642 INTS5Q6P9B9 1019 aaKnown RBP35.09■■■■□ 3.21
VEGFA-207ENST00000413642 KCPQ6ZWJ8 1503 aa35.09■■■■□ 3.21
VEGFA-207ENST00000413642 TJP1Q07157 1748 aa35.08■■■■□ 3.21
VEGFA-207ENST00000413642 CEMIPQ8WUJ3 1361 aa35.06■■■■□ 3.2
VEGFA-207ENST00000413642 CYP19A1P11511 503 aaPredicted RBP35.05■■■■□ 3.2
VEGFA-207ENST00000413642 ADRA2BP18089 450 aa35.05■■■■□ 3.2
VEGFA-207ENST00000413642 DCTN1Q14203 1278 aa35.05■■■■□ 3.2
VEGFA-207ENST00000413642 MCM10Q7L590 875 aa35.05■■■■□ 3.2
VEGFA-207ENST00000413642 RFC4P35249 363 aa35.04■■■■□ 3.2
VEGFA-207ENST00000413642 TTC5Q8N0Z6 440 aa35.04■■■■□ 3.2
VEGFA-207ENST00000413642 KCNQ3O43525 872 aa35.03■■■■□ 3.2
VEGFA-207ENST00000413642 ZNF496Q96IT1 587 aaPredicted RBP35.03■■■■□ 3.2
VEGFA-207ENST00000413642 CCDC87Q9NVE4 849 aa35.03■■■■□ 3.2
VEGFA-207ENST00000413642 VIRMAQ69YN4 1812 aaKnown RBP35.03■■■■□ 3.2
VEGFA-207ENST00000413642 MYH14Q7Z406 1995 aaKnown RBP35.03■■■■□ 3.2
VEGFA-207ENST00000413642 ZNF790Q6PG37 636 aa35.02■■■■□ 3.2
VEGFA-207ENST00000413642 MMP10P09238 476 aa35.01■■■■□ 3.2
VEGFA-207ENST00000413642 GYS1P13807 737 aa35.01■■■■□ 3.2
VEGFA-207ENST00000413642 ZEB1P37275 1124 aaPredicted RBP35.01■■■■□ 3.2
VEGFA-207ENST00000413642 PLEKHF1Q96S99 279 aa35.01■■■■□ 3.2
VEGFA-207ENST00000413642 SRP68Q9UHB9 627 aaKnown RBP35.01■■■■□ 3.2
VEGFA-207ENST00000413642 PELP1Q8IZL8 1130 aaKnown RBP35■■■■□ 3.19
VEGFA-207ENST00000413642 RTF1Q92541 710 aaKnown RBP35■■■■□ 3.19
VEGFA-207ENST00000413642 CICQ96RK0 1608 aaPredicted RBP34.99■■■■□ 3.19
VEGFA-207ENST00000413642 GPR162Q16538 588 aa34.99■■■■□ 3.19
VEGFA-207ENST00000413642 VSIG10Q8N0Z9 540 aa34.99■■■■□ 3.19
VEGFA-207ENST00000413642 CD2APQ9Y5K6 639 aa34.99■■■■□ 3.19
VEGFA-207ENST00000413642 ZBTB1Q9Y2K1 713 aa34.98■■■■□ 3.19
VEGFA-207ENST00000413642 BTBD11A6QL63 1104 aa34.97■■■■□ 3.19
VEGFA-207ENST00000413642 YY1P25490 414 aa34.97■■■■□ 3.19
VEGFA-207ENST00000413642 NLGN1Q8N2Q7 840 aa34.97■■■■□ 3.19
VEGFA-207ENST00000413642 MYBBP1AQ9BQG0 1328 aaKnown RBP34.97■■■■□ 3.19
VEGFA-207ENST00000413642 SOS1Q07889 1333 aaPredicted RBP34.96■■■■□ 3.19
VEGFA-207ENST00000413642 HEG1Q9ULI3 1381 aa34.95■■■■□ 3.19
VEGFA-207ENST00000413642 USP42Q9H9J4 1324 aaKnown RBP34.93■■■■□ 3.18
VEGFA-207ENST00000413642 HTATSF1O43719 755 aaKnown RBP34.93■■■■□ 3.18
VEGFA-207ENST00000413642 SIPA1L3O60292 1781 aaPredicted RBP34.92■■■■□ 3.18
VEGFA-207ENST00000413642 UBR2Q8IWV8 1755 aa34.92■■■■□ 3.18
VEGFA-207ENST00000413642 NEFMP07197 916 aa34.92■■■■□ 3.18
VEGFA-207ENST00000413642 CANXP27824 592 aaKnown RBP34.92■■■■□ 3.18
VEGFA-207ENST00000413642 FKBP8Q14318 412 aa34.92■■■■□ 3.18
VEGFA-207ENST00000413642 YBX3P16989 372 aaKnown RBP eCLIP34.91■■■■□ 3.18
VEGFA-207ENST00000413642 FMNL2Q96PY5 1086 aa34.91■■■■□ 3.18
VEGFA-207ENST00000413642 NFE2L2Q16236 605 aa34.89■■■■□ 3.18
VEGFA-207ENST00000413642 WWC3Q9ULE0 1092 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms