RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 GOLGA6L6A8MZA4 724 aa7.18□□□□□ -1.26
PRDM2-206ENST00000413440 PNISRQ8TF01 805 aaKnown RBP7.18□□□□□ -1.26
PRDM2-206ENST00000413440 ANKIB1Q9P2G1 1089 aa7.18□□□□□ -1.26
PRDM2-206ENST00000413440 BRD4O60885 1362 aaPredicted RBP7.18□□□□□ -1.26
PRDM2-206ENST00000413440 POLR3AO14802 1390 aaPredicted RBP7.18□□□□□ -1.26
PRDM2-206ENST00000413440 TBC1D2BQ9UPU7 963 aa7.18□□□□□ -1.26
PRDM2-206ENST00000413440 RUNDC1Q96C34 613 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 DCCP43146 1447 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 FKBP5Q13451 457 aaPredicted RBP7.17□□□□□ -1.26
PRDM2-206ENST00000413440 AEBP1Q8IUX7 1158 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 SPRYD3Q8NCJ5 442 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 FLAD1Q8NFF5 587 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 ZBTB3Q9H5J0 574 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 TECPR2O15040 1411 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 TULP4Q9NRJ4 1543 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 KCNQ2O43526 872 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 TXNRD1Q16881 649 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 DEPDC5O75140 1603 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 H0YIN7 160 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 EYA1Q99502 592 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 SMC4Q9NTJ3 1288 aa7.17□□□□□ -1.26
PRDM2-206ENST00000413440 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.17□□□□□ -1.26
PRDM2-206ENST00000413440 LMOD1P29536 600 aaPredicted RBP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 ITPRIPQ8IWB1 547 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 FBXO3Q9UK99 471 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 USP6P35125 1406 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 CRB1P82279 1406 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 NOC3LQ8WTT2 800 aaKnown RBP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 APAF1O14727 1248 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 RAD21O60216 631 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 SPATA31E1Q6ZUB1 1445 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 ARHGAP23Q9P227 1491 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 DZIP3Q86Y13 1208 aaKnown RBP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 CRBNQ96SW2 442 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 TEX13AQ9BXU3 409 aaPredicted RBP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 QRICH2Q9H0J4 1663 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 GNL2Q13823 731 aaKnown RBP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 AKAP4Q5JQC9 854 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 NIP7Q9Y221 180 aaKnown RBP eCLIP7.16□□□□□ -1.26
PRDM2-206ENST00000413440 RALGAPBQ86X10 1494 aa7.16□□□□□ -1.26
PRDM2-206ENST00000413440 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 DCAF5Q96JK2 942 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 MED1Q15648 1581 aaPredicted RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 NEURL4Q96JN8 1562 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 HDGFL1Q5TGJ6 251 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 SAMD1Q6SPF0 538 aaPredicted RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 ARHGEF25Q86VW2 580 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 DDRGK1Q96HY6 314 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 MROH1Q8NDA8 1641 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 THUMPD2Q9BTF0 503 aaKnown RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 CNNM1Q9NRU3 951 aa7.15□□□□□ -1.26
PRDM2-206ENST00000413440 TRMT112Q9UI30 125 aaKnown RBP7.15□□□□□ -1.26
PRDM2-206ENST00000413440 SSFA2P28290 1259 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 ATP7BP35670 1465 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 IQSEC2Q5JU85 1478 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 C6orf229H3BNL8 230 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 NRDCO43847 1150 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 VWDEQ8N2E2 1590 aa7.15□□□□□ -1.27
PRDM2-206ENST00000413440 KDM5AP29375 1690 aaKnown RBP7.14□□□□□ -1.27
PRDM2-206ENST00000413440 LAMC1P11047 1609 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 CCDC43Q96MW1 224 aaKnown RBP7.14□□□□□ -1.27
PRDM2-206ENST00000413440 SSH2Q76I76 1423 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 PRKRIP1Q9H875 184 aaPredicted RBP7.14□□□□□ -1.27
PRDM2-206ENST00000413440 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
PRDM2-206ENST00000413440 AXIN2Q9Y2T1 843 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 STRCQ7RTU9 1775 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 GNAI1P63096 354 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 BECN1Q14457 450 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 C2CD5Q86YS7 1000 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 JDP2Q8WYK2 163 aa7.14□□□□□ -1.27
PRDM2-206ENST00000413440 RRP12Q5JTH9 1297 aaKnown RBP7.13□□□□□ -1.27
PRDM2-206ENST00000413440 DDX46Q7L014 1031 aaKnown RBP7.13□□□□□ -1.27
PRDM2-206ENST00000413440 WWC1Q8IX03 1113 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 CNBD1Q8NA66 436 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 RNMTO43148 476 aaKnown RBP7.13□□□□□ -1.27
PRDM2-206ENST00000413440 PPP1R42Q7Z4L9 355 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 MYD88Q99836 296 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 POLKQ9UBT6 870 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
PRDM2-206ENST00000413440 MPHOSPH8Q99549 860 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 SPINK5Q9NQ38 1064 aaPredicted RBP7.13□□□□□ -1.27
PRDM2-206ENST00000413440 OVOS2A0A0G2JMS6 1433 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 OVOS2A0A0J9YW53 1432 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 OVOS2Q6IE36 1432 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 SETBP1Q9Y6X0 1596 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 RIMBP2O15034 1052 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
PRDM2-206ENST00000413440 SNRPA1P09661 255 aaKnown RBP7.12□□□□□ -1.27
PRDM2-206ENST00000413440 CCDC27Q2M243 656 aa7.12□□□□□ -1.27
PRDM2-206ENST00000413440 MTHFSDQ2M296 383 aaKnown RBP7.12□□□□□ -1.27
PRDM2-206ENST00000413440 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
PRDM2-206ENST00000413440 SIK1P57059 783 aa7.12□□□□□ -1.27
PRDM2-206ENST00000413440 RBM17Q96I25 401 aaKnown RBP7.12□□□□□ -1.27
PRDM2-206ENST00000413440 ASAP1Q9ULH1 1129 aa7.12□□□□□ -1.27
PRDM2-206ENST00000413440 DPY19L2Q6NUT2 758 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms