RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TXNRD1Q16881 649 aa10.29□□□□□ -0.76
CPSF4-202ENST00000412686 AKAP4Q5JQC9 854 aa10.29□□□□□ -0.76
CPSF4-202ENST00000412686 PIGBQ92521 554 aa10.29□□□□□ -0.76
CPSF4-202ENST00000412686 PAPPAQ13219 1627 aa10.29□□□□□ -0.76
CPSF4-202ENST00000412686 FCHSD2O94868 740 aa10.28□□□□□ -0.76
CPSF4-202ENST00000412686 HSP90AB1P08238 724 aaKnown RBP10.28□□□□□ -0.76
CPSF4-202ENST00000412686 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
CPSF4-202ENST00000412686 DCAF5Q96JK2 942 aa10.28□□□□□ -0.76
CPSF4-202ENST00000412686 PLEKHF1Q96S99 279 aa10.28□□□□□ -0.76
CPSF4-202ENST00000412686 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
CPSF4-202ENST00000412686 PALLDQ8WX93 1383 aa10.27□□□□□ -0.76
CPSF4-202ENST00000412686 MAP3K5Q99683 1374 aa10.27□□□□□ -0.76
CPSF4-202ENST00000412686 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-202ENST00000412686 RNMTO43148 476 aaKnown RBP10.27□□□□□ -0.77
CPSF4-202ENST00000412686 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.77
CPSF4-202ENST00000412686 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-202ENST00000412686 LRRC4BQ9NT99 713 aa10.27□□□□□ -0.77
CPSF4-202ENST00000412686 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
CPSF4-202ENST00000412686 MRC1P22897 1456 aa10.27□□□□□ -0.77
CPSF4-202ENST00000412686 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-202ENST00000412686 CABP4P57796 275 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 DCTN1Q14203 1278 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 IL17REQ8NFR9 667 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 ATG3Q9NT62 314 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
CPSF4-202ENST00000412686 C5P01031 1676 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 GNAT3A8MTJ3 354 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 ERVV-2B6SEH9 535 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 R3HDM1Q15032 1099 aaKnown RBP10.25□□□□□ -0.77
CPSF4-202ENST00000412686 WDR43Q15061 677 aaKnown RBP eCLIP10.25□□□□□ -0.77
CPSF4-202ENST00000412686 MCM10Q7L590 875 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 MRS2Q9HD23 443 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 CCNL1Q9UK58 526 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-202ENST00000412686 TAF1LQ8IZX4 1826 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 TUBGCP6Q96RT7 1819 aa10.25□□□□□ -0.77
CPSF4-202ENST00000412686 SLC39A6Q13433 755 aa10.24□□□□□ -0.77
CPSF4-202ENST00000412686 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
CPSF4-202ENST00000412686 THUMPD2Q9BTF0 503 aaKnown RBP10.24□□□□□ -0.77
CPSF4-202ENST00000412686 SLC52A2Q9HAB3 445 aa10.24□□□□□ -0.77
CPSF4-202ENST00000412686 RRP7AQ9Y3A4 280 aaKnown RBP10.24□□□□□ -0.77
CPSF4-202ENST00000412686 MAPK8IP3Q9UPT6 1336 aa10.24□□□□□ -0.77
CPSF4-202ENST00000412686 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
CPSF4-202ENST00000412686 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
CPSF4-202ENST00000412686 PDGFDQ9GZP0 370 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-202ENST00000412686 CEMIPQ8WUJ3 1361 aa10.23□□□□□ -0.77
CPSF4-202ENST00000412686 TJP1Q07157 1748 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 LOC102724428A0A0B4J2F2 783 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 NEFMP07197 916 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 SIK1P57059 783 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 ITPK1Q13572 414 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 PNISRQ8TF01 805 aaKnown RBP10.22□□□□□ -0.77
CPSF4-202ENST00000412686 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-202ENST00000412686 KCPQ6ZWJ8 1503 aa10.22□□□□□ -0.77
CPSF4-202ENST00000412686 C4BP0C0L5 1744 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 CASZ1Q86V15 1759 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 UBR2Q8IWV8 1755 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 KCNQ3O43525 872 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
CPSF4-202ENST00000412686 TMPOP42166 694 aaKnown RBP10.21□□□□□ -0.77
CPSF4-202ENST00000412686 NEUROD2Q15784 382 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 SMIM5Q71RC9 77 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 RUNDC1Q96C34 613 aa10.21□□□□□ -0.77
CPSF4-202ENST00000412686 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
CPSF4-202ENST00000412686 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.78
CPSF4-202ENST00000412686 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 RIPK4P57078 832 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 TEFQ10587 303 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 SLC15A2Q16348 729 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 AMIGO3Q86WK7 504 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
CPSF4-202ENST00000412686 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
CPSF4-202ENST00000412686 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
CPSF4-202ENST00000412686 ZNF831Q5JPB2 1677 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 APAF1O14727 1248 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 DIEXFQ68CQ4 756 aaKnown RBP10.19□□□□□ -0.78
CPSF4-202ENST00000412686 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
CPSF4-202ENST00000412686 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 KDM3BQ7LBC6 1761 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 QSER1Q2KHR3 1735 aa10.19□□□□□ -0.78
CPSF4-202ENST00000412686 CICQ96RK0 1608 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-202ENST00000412686 BTBD11A6QL63 1104 aa10.18□□□□□ -0.78
CPSF4-202ENST00000412686 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
CPSF4-202ENST00000412686 FAM9BQ8IZU0 186 aa10.18□□□□□ -0.78
CPSF4-202ENST00000412686 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
CPSF4-202ENST00000412686 MYH14Q7Z406 1995 aaKnown RBP10.17□□□□□ -0.78
CPSF4-202ENST00000412686 PNPLA7Q6ZV29 1317 aa10.17□□□□□ -0.78
CPSF4-202ENST00000412686 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
CPSF4-202ENST00000412686 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
CPSF4-202ENST00000412686 ZNF496Q96IT1 587 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-202ENST00000412686 PRAMEF22A3QJZ6 481 aa10.16□□□□□ -0.78
CPSF4-202ENST00000412686 TTC5Q8N0Z6 440 aa10.16□□□□□ -0.78
CPSF4-202ENST00000412686 MIER1Q8N108 512 aa10.16□□□□□ -0.78
CPSF4-202ENST00000412686 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms