RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
CXXC1-202ENST00000412036 BRPF1P55201 1214 aaPredicted RBP23.15■■□□□ 1.3
CXXC1-202ENST00000412036 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
CXXC1-202ENST00000412036 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
CXXC1-202ENST00000412036 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
CXXC1-202ENST00000412036 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
CXXC1-202ENST00000412036 G2E3Q7L622 706 aa23.14■■□□□ 1.29
CXXC1-202ENST00000412036 SLIT2O94813 1529 aa23.14■■□□□ 1.29
CXXC1-202ENST00000412036 ZNF428Q96B54 188 aa23.13■■□□□ 1.29
CXXC1-202ENST00000412036 JCADQ9P266 1359 aa23.13■■□□□ 1.29
CXXC1-202ENST00000412036 DDX54Q8TDD1 881 aaKnown RBP23.13■■□□□ 1.29
CXXC1-202ENST00000412036 RGS12O14924 1447 aa23.13■■□□□ 1.29
CXXC1-202ENST00000412036 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
CXXC1-202ENST00000412036 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
CXXC1-202ENST00000412036 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
CXXC1-202ENST00000412036 BABAM1Q9NWV8 329 aa23.12■■□□□ 1.29
CXXC1-202ENST00000412036 MRC1P22897 1456 aa23.11■■□□□ 1.29
CXXC1-202ENST00000412036 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
CXXC1-202ENST00000412036 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
CXXC1-202ENST00000412036 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
CXXC1-202ENST00000412036 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
CXXC1-202ENST00000412036 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
CXXC1-202ENST00000412036 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
CXXC1-202ENST00000412036 SKAP1Q86WV1 359 aa23.1■■□□□ 1.29
CXXC1-202ENST00000412036 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
CXXC1-202ENST00000412036 WNK3Q9BYP7 1800 aa23.09■■□□□ 1.29
CXXC1-202ENST00000412036 SPATA31A1Q5TZJ5 1347 aa23.09■■□□□ 1.29
CXXC1-202ENST00000412036 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
CXXC1-202ENST00000412036 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
CXXC1-202ENST00000412036 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.29
CXXC1-202ENST00000412036 BCL9LQ86UU0 1499 aa23.08■■□□□ 1.29
CXXC1-202ENST00000412036 FTSJ3Q8IY81 847 aaKnown RBP23.07■■□□□ 1.28
CXXC1-202ENST00000412036 NKX1-1Q15270 411 aaPredicted RBP23.06■■□□□ 1.28
CXXC1-202ENST00000412036 GLI3P10071 1580 aa23.06■■□□□ 1.28
CXXC1-202ENST00000412036 NWD2Q9ULI1 1742 aa23.06■■□□□ 1.28
CXXC1-202ENST00000412036 ANXA1P04083 346 aa23.05■■□□□ 1.28
CXXC1-202ENST00000412036 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
CXXC1-202ENST00000412036 PCDHB15Q9Y5E8 787 aa23.05■■□□□ 1.28
CXXC1-202ENST00000412036 C5P01031 1676 aa23.05■■□□□ 1.28
CXXC1-202ENST00000412036 ABCC4O15439 1325 aa23.05■■□□□ 1.28
CXXC1-202ENST00000412036 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
CXXC1-202ENST00000412036 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
CXXC1-202ENST00000412036 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
CXXC1-202ENST00000412036 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
CXXC1-202ENST00000412036 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
CXXC1-202ENST00000412036 IGHDP01880 384 aa23.03■■□□□ 1.28
CXXC1-202ENST00000412036 ARHGAP45Q92619 1136 aa23.03■■□□□ 1.28
CXXC1-202ENST00000412036 ZNF496Q96IT1 587 aaPredicted RBP23.03■■□□□ 1.28
CXXC1-202ENST00000412036 KDM2BQ8NHM5 1336 aa23.03■■□□□ 1.28
CXXC1-202ENST00000412036 HDGFL1Q5TGJ6 251 aa23.02■■□□□ 1.28
CXXC1-202ENST00000412036 PHAXQ9H814 394 aaKnown RBP23.02■■□□□ 1.28
CXXC1-202ENST00000412036 F6X3S4 739 aa23.02■■□□□ 1.28
CXXC1-202ENST00000412036 IPO8O15397 1037 aaKnown RBP23.02■■□□□ 1.28
CXXC1-202ENST00000412036 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
CXXC1-202ENST00000412036 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
CXXC1-202ENST00000412036 CABP4P57796 275 aa23.01■■□□□ 1.27
CXXC1-202ENST00000412036 EP400Q96L91 3159 aa23.01■■□□□ 1.27
CXXC1-202ENST00000412036 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
CXXC1-202ENST00000412036 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
CXXC1-202ENST00000412036 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
CXXC1-202ENST00000412036 CCDC30Q5VVM6 783 aa22.99■■□□□ 1.27
CXXC1-202ENST00000412036 FNBP4Q8N3X1 1017 aaPredicted RBP22.99■■□□□ 1.27
CXXC1-202ENST00000412036 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
CXXC1-202ENST00000412036 CCDC9Q9Y3X0 531 aaKnown RBP22.98■■□□□ 1.27
CXXC1-202ENST00000412036 FLIIQ13045 1269 aa22.97■■□□□ 1.27
CXXC1-202ENST00000412036 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
CXXC1-202ENST00000412036 TNS2Q63HR2 1409 aa22.97■■□□□ 1.27
CXXC1-202ENST00000412036 ITGB4P16144 1822 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 PAPPAQ13219 1627 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 ZBTB7BO15156 539 aaPredicted RBP22.96■■□□□ 1.27
CXXC1-202ENST00000412036 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 PIP4K2AP48426 406 aaPredicted RBP22.96■■□□□ 1.27
CXXC1-202ENST00000412036 PDIA6Q15084 440 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 C1orf115Q9H7X2 142 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
CXXC1-202ENST00000412036 EXOC5O00471 708 aa22.95■■□□□ 1.26
CXXC1-202ENST00000412036 HOXB7P09629 217 aa22.95■■□□□ 1.26
CXXC1-202ENST00000412036 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.26
CXXC1-202ENST00000412036 API5Q9BZZ5 524 aaKnown RBP22.95■■□□□ 1.26
CXXC1-202ENST00000412036 UBR2Q8IWV8 1755 aa22.95■■□□□ 1.26
CXXC1-202ENST00000412036 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
CXXC1-202ENST00000412036 MARCH10Q8NA82 808 aaPredicted RBP22.94■■□□□ 1.26
CXXC1-202ENST00000412036 PIGBQ92521 554 aa22.94■■□□□ 1.26
CXXC1-202ENST00000412036 STK31Q9BXU1 1019 aa22.94■■□□□ 1.26
CXXC1-202ENST00000412036 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
CXXC1-202ENST00000412036 PTPRCP08575 1304 aa22.94■■□□□ 1.26
CXXC1-202ENST00000412036 SOS1Q07889 1333 aaPredicted RBP22.94■■□□□ 1.26
CXXC1-202ENST00000412036 CACNA1FO60840 1977 aa22.93■■□□□ 1.26
CXXC1-202ENST00000412036 VPS72Q15906 364 aa22.93■■□□□ 1.26
CXXC1-202ENST00000412036 USP21Q9UK80 565 aa22.93■■□□□ 1.26
CXXC1-202ENST00000412036 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
CXXC1-202ENST00000412036 THRAP3Q9Y2W1 955 aaKnown RBP22.93■■□□□ 1.26
CXXC1-202ENST00000412036 MS4A1P11836 297 aa22.92■■□□□ 1.26
CXXC1-202ENST00000412036 INTS3Q68E01 1043 aaKnown RBP22.92■■□□□ 1.26
CXXC1-202ENST00000412036 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
CXXC1-202ENST00000412036 FKBP5Q13451 457 aaPredicted RBP22.91■■□□□ 1.26
CXXC1-202ENST00000412036 DDB1Q16531 1140 aa22.91■■□□□ 1.26
CXXC1-202ENST00000412036 PTCD1O75127 700 aaKnown RBP22.91■■□□□ 1.26
CXXC1-202ENST00000412036 DOT1LQ8TEK3 1739 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms