RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 ATG3Q9NT62 314 aa24.33■■□□□ 1.49
RFC4-203ENST00000411792 MSH5O43196 834 aa24.32■■□□□ 1.48
RFC4-203ENST00000411792 RNMTO43148 476 aaKnown RBP24.31■■□□□ 1.48
RFC4-203ENST00000411792 NFATC2IPQ8NCF5 419 aa24.31■■□□□ 1.48
RFC4-203ENST00000411792 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
RFC4-203ENST00000411792 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
RFC4-203ENST00000411792 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
RFC4-203ENST00000411792 AK7Q96M32 723 aa24.29■■□□□ 1.48
RFC4-203ENST00000411792 RBM42Q9BTD8 480 aaKnown RBP24.29■■□□□ 1.48
RFC4-203ENST00000411792 SLC52A2Q9HAB3 445 aa24.29■■□□□ 1.48
RFC4-203ENST00000411792 PNPLA7Q6ZV29 1317 aa24.29■■□□□ 1.48
RFC4-203ENST00000411792 PTGER2P43116 358 aa24.28■■□□□ 1.48
RFC4-203ENST00000411792 PNNQ9H307 717 aaKnown RBP24.28■■□□□ 1.48
RFC4-203ENST00000411792 LGR6Q9HBX8 967 aa24.28■■□□□ 1.48
RFC4-203ENST00000411792 PHACTR3Q96KR7 559 aa24.26■■□□□ 1.47
RFC4-203ENST00000411792 C5P01031 1676 aa24.26■■□□□ 1.47
RFC4-203ENST00000411792 SLC16A10Q8TF71 515 aa24.25■■□□□ 1.47
RFC4-203ENST00000411792 PRKRIP1Q9H875 184 aaPredicted RBP24.25■■□□□ 1.47
RFC4-203ENST00000411792 TUBGCP6Q96RT7 1819 aa24.25■■□□□ 1.47
RFC4-203ENST00000411792 QSER1Q2KHR3 1735 aa24.24■■□□□ 1.47
RFC4-203ENST00000411792 SCN11AQ9UI33 1791 aa24.24■■□□□ 1.47
RFC4-203ENST00000411792 TEFQ10587 303 aa24.24■■□□□ 1.47
RFC4-203ENST00000411792 FLAD1Q8NFF5 587 aa24.24■■□□□ 1.47
RFC4-203ENST00000411792 RTF1Q92541 710 aaKnown RBP24.24■■□□□ 1.47
RFC4-203ENST00000411792 DCAF8L1A6NGE4 600 aa24.23■■□□□ 1.47
RFC4-203ENST00000411792 PTCD1O75127 700 aaKnown RBP24.23■■□□□ 1.47
RFC4-203ENST00000411792 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
RFC4-203ENST00000411792 MRC1P22897 1456 aa24.23■■□□□ 1.47
RFC4-203ENST00000411792 TAF1LQ8IZX4 1826 aa24.22■■□□□ 1.47
RFC4-203ENST00000411792 POLD1P28340 1107 aa24.22■■□□□ 1.47
RFC4-203ENST00000411792 LINC00116Q8NCU8 138 aa24.22■■□□□ 1.47
RFC4-203ENST00000411792 ARXQ96QS3 562 aa24.22■■□□□ 1.47
RFC4-203ENST00000411792 ITPK1Q13572 414 aa24.21■■□□□ 1.47
RFC4-203ENST00000411792 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
RFC4-203ENST00000411792 C4BP0C0L5 1744 aa24.21■■□□□ 1.47
RFC4-203ENST00000411792 TTC5Q8N0Z6 440 aa24.2■■□□□ 1.46
RFC4-203ENST00000411792 KLHL34Q8N239 644 aa24.2■■□□□ 1.46
RFC4-203ENST00000411792 SGIP1Q9BQI5 828 aa24.2■■□□□ 1.46
RFC4-203ENST00000411792 FHDC1Q9C0D6 1143 aaPredicted RBP24.2■■□□□ 1.46
RFC4-203ENST00000411792 GNPATO15228 680 aa24.19■■□□□ 1.46
RFC4-203ENST00000411792 PHF14O94880 888 aa24.19■■□□□ 1.46
RFC4-203ENST00000411792 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
RFC4-203ENST00000411792 IL17REQ8NFR9 667 aa24.19■■□□□ 1.46
RFC4-203ENST00000411792 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
RFC4-203ENST00000411792 SLC39A6Q13433 755 aa24.17■■□□□ 1.46
RFC4-203ENST00000411792 HTATSF1O43719 755 aaKnown RBP24.16■■□□□ 1.46
RFC4-203ENST00000411792 SSFA2P28290 1259 aa24.16■■□□□ 1.46
RFC4-203ENST00000411792 MSL1Q68DK7 614 aa24.16■■□□□ 1.46
RFC4-203ENST00000411792 SLC4A9Q96Q91 983 aa24.16■■□□□ 1.46
RFC4-203ENST00000411792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
RFC4-203ENST00000411792 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
RFC4-203ENST00000411792 RTCBQ9Y3I0 505 aaKnown RBP24.15■■□□□ 1.46
RFC4-203ENST00000411792 CEMIPQ8WUJ3 1361 aa24.15■■□□□ 1.46
RFC4-203ENST00000411792 CNTNAP4Q9C0A0 1308 aa24.14■■□□□ 1.46
RFC4-203ENST00000411792 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
RFC4-203ENST00000411792 PLEKHF1Q96S99 279 aa24.14■■□□□ 1.45
RFC4-203ENST00000411792 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
RFC4-203ENST00000411792 RC3H1Q5TC82 1133 aaKnown RBP24.13■■□□□ 1.45
RFC4-203ENST00000411792 MCM10Q7L590 875 aa24.13■■□□□ 1.45
RFC4-203ENST00000411792 BTBD11A6QL63 1104 aa24.12■■□□□ 1.45
RFC4-203ENST00000411792 ANP32CO43423 234 aa24.12■■□□□ 1.45
RFC4-203ENST00000411792 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
RFC4-203ENST00000411792 ZNF790Q6PG37 636 aa24.11■■□□□ 1.45
RFC4-203ENST00000411792 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
RFC4-203ENST00000411792 AMIGO3Q86WK7 504 aa24.1■■□□□ 1.45
RFC4-203ENST00000411792 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 ADRA2BP18089 450 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 CRKLP46109 303 aaKnown RBP24.09■■□□□ 1.45
RFC4-203ENST00000411792 DCTN1Q14203 1278 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 TRAPPC3LQ5T215 181 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 DNAJC10Q8IXB1 793 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 VSIG10Q8N0Z9 540 aa24.09■■□□□ 1.45
RFC4-203ENST00000411792 RPS6KA4O75676 772 aa24.08■■□□□ 1.45
RFC4-203ENST00000411792 FMNL2Q96PY5 1086 aa24.08■■□□□ 1.45
RFC4-203ENST00000411792 KCPQ6ZWJ8 1503 aa24.08■■□□□ 1.45
RFC4-203ENST00000411792 STARD3NLO95772 234 aa24.06■■□□□ 1.44
RFC4-203ENST00000411792 LMOD3Q0VAK6 560 aa24.06■■□□□ 1.44
RFC4-203ENST00000411792 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
RFC4-203ENST00000411792 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
RFC4-203ENST00000411792 COL24A1Q17RW2 1714 aa24.05■■□□□ 1.44
RFC4-203ENST00000411792 RFC4P35249 363 aa24.05■■□□□ 1.44
RFC4-203ENST00000411792 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
RFC4-203ENST00000411792 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
RFC4-203ENST00000411792 TEX13AQ9BXU3 409 aaPredicted RBP24.05■■□□□ 1.44
RFC4-203ENST00000411792 CCDC87Q9NVE4 849 aa24.05■■□□□ 1.44
RFC4-203ENST00000411792 CICQ96RK0 1608 aaPredicted RBP24.05■■□□□ 1.44
RFC4-203ENST00000411792 HEG1Q9ULI3 1381 aa24.04■■□□□ 1.44
RFC4-203ENST00000411792 TJP1Q07157 1748 aa24.04■■□□□ 1.44
RFC4-203ENST00000411792 RIPK4P57078 832 aa24.04■■□□□ 1.44
RFC4-203ENST00000411792 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
RFC4-203ENST00000411792 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
RFC4-203ENST00000411792 CYP19A1P11511 503 aaPredicted RBP24.03■■□□□ 1.44
RFC4-203ENST00000411792 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
RFC4-203ENST00000411792 PNISRQ8TF01 805 aaKnown RBP24.03■■□□□ 1.44
RFC4-203ENST00000411792 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
RFC4-203ENST00000411792 TMPOP42166 694 aaKnown RBP24.01■■□□□ 1.43
RFC4-203ENST00000411792 INTS5Q6P9B9 1019 aaKnown RBP24.01■■□□□ 1.43
RFC4-203ENST00000411792 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
RFC4-203ENST00000411792 UBR2Q8IWV8 1755 aa24.01■■□□□ 1.43
RFC4-203ENST00000411792 GPR162Q16538 588 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms