RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 MSNP26038 577 aaKnown RBP20.42■□□□□ 0.86
PDK1-203ENST00000410055 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
PDK1-203ENST00000410055 PTPRCP08575 1304 aa20.41■□□□□ 0.86
PDK1-203ENST00000410055 KCNA6P17658 529 aa20.41■□□□□ 0.86
PDK1-203ENST00000410055 PLEKHG1Q9ULL1 1385 aa20.41■□□□□ 0.86
PDK1-203ENST00000410055 UTP14CQ5TAP6 766 aaKnown RBP20.4■□□□□ 0.86
PDK1-203ENST00000410055 SSFA2P28290 1259 aa20.4■□□□□ 0.86
PDK1-203ENST00000410055 FLT4P35916 1363 aa20.4■□□□□ 0.86
PDK1-203ENST00000410055 AKAP12Q02952 1782 aa20.39■□□□□ 0.86
PDK1-203ENST00000410055 RGS12O14924 1447 aa20.39■□□□□ 0.86
PDK1-203ENST00000410055 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.85
PDK1-203ENST00000410055 HMMRO75330 724 aa20.39■□□□□ 0.85
PDK1-203ENST00000410055 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.85
PDK1-203ENST00000410055 CASC1Q6TDU7 716 aa20.39■□□□□ 0.85
PDK1-203ENST00000410055 RIMS1Q86UR5 1692 aaKnown RBP20.39■□□□□ 0.85
PDK1-203ENST00000410055 ATP10DQ9P241 1426 aa20.38■□□□□ 0.85
PDK1-203ENST00000410055 KNDC1Q76NI1 1749 aa20.38■□□□□ 0.85
PDK1-203ENST00000410055 GBP4Q96PP9 640 aa20.38■□□□□ 0.85
PDK1-203ENST00000410055 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
PDK1-203ENST00000410055 CRB1P82279 1406 aa20.38■□□□□ 0.85
PDK1-203ENST00000410055 SETD1BQ9UPS6 1966 aaKnown RBP20.38■□□□□ 0.85
PDK1-203ENST00000410055 KIAA0232Q92628 1395 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 CBX1P83916 185 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 FLIIQ13045 1269 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 ZSCAN30Q86W11 494 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 PEAK1Q9H792 1746 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 XPCQ01831 940 aaPredicted RBP20.37■□□□□ 0.85
PDK1-203ENST00000410055 TTC21AQ8NDW8 1320 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 RILPL2Q969X0 211 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
PDK1-203ENST00000410055 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
PDK1-203ENST00000410055 THEMISQ8N1K5 641 aaPredicted RBP20.36■□□□□ 0.85
PDK1-203ENST00000410055 SBNO1A3KN83 1393 aa20.36■□□□□ 0.85
PDK1-203ENST00000410055 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
PDK1-203ENST00000410055 GNAI2P04899 355 aa20.36■□□□□ 0.85
PDK1-203ENST00000410055 HOXC9P31274 260 aa20.36■□□□□ 0.85
PDK1-203ENST00000410055 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
PDK1-203ENST00000410055 FOXD4L5Q5VV16 416 aaPredicted RBP20.35■□□□□ 0.85
PDK1-203ENST00000410055 FOXD4L4Q8WXT5 416 aaPredicted RBP20.35■□□□□ 0.85
PDK1-203ENST00000410055 USP31Q70CQ4 1352 aa20.35■□□□□ 0.85
PDK1-203ENST00000410055 IGSF3O75054 1194 aa20.35■□□□□ 0.85
PDK1-203ENST00000410055 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
PDK1-203ENST00000410055 PNMA6EA0A0J9YXQ4 647 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 DDIT3P35638 169 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 RAB3GAP1Q15042 981 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 ZFP91Q96JP5 570 aaPredicted RBP20.34■□□□□ 0.85
PDK1-203ENST00000410055 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
PDK1-203ENST00000410055 AK9Q5TCS8 1911 aa20.33■□□□□ 0.85
PDK1-203ENST00000410055 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
PDK1-203ENST00000410055 ARHGEF10O15013 1369 aa20.33■□□□□ 0.85
PDK1-203ENST00000410055 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.85
PDK1-203ENST00000410055 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
PDK1-203ENST00000410055 IGSF1Q8N6C5 1336 aa20.33■□□□□ 0.84
PDK1-203ENST00000410055 IL1RAPL2Q9NP60 686 aa20.33■□□□□ 0.84
PDK1-203ENST00000410055 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.84
PDK1-203ENST00000410055 PDE1AP54750 535 aa20.32■□□□□ 0.84
PDK1-203ENST00000410055 RABEP1Q15276 862 aa20.32■□□□□ 0.84
PDK1-203ENST00000410055 JARID2Q92833 1246 aaPredicted RBP20.32■□□□□ 0.84
PDK1-203ENST00000410055 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
PDK1-203ENST00000410055 ANXA1P04083 346 aa20.32■□□□□ 0.84
PDK1-203ENST00000410055 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
PDK1-203ENST00000410055 PKP1Q13835 747 aa20.31■□□□□ 0.84
PDK1-203ENST00000410055 CCDC94Q9BW85 323 aaPredicted RBP20.31■□□□□ 0.84
PDK1-203ENST00000410055 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
PDK1-203ENST00000410055 CDK11BP21127 795 aaKnown RBP20.31■□□□□ 0.84
PDK1-203ENST00000410055 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
PDK1-203ENST00000410055 CIZ1Q9ULV3 898 aaPredicted RBP20.31■□□□□ 0.84
PDK1-203ENST00000410055 MAP4K4O95819 1239 aaPredicted RBP20.3■□□□□ 0.84
PDK1-203ENST00000410055 CGNQ9P2M7 1197 aaKnown RBP20.3■□□□□ 0.84
PDK1-203ENST00000410055 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
PDK1-203ENST00000410055 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
PDK1-203ENST00000410055 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
PDK1-203ENST00000410055 LRRCC1Q9C099 1032 aa20.29■□□□□ 0.84
PDK1-203ENST00000410055 REC8O95072 547 aa20.29■□□□□ 0.84
PDK1-203ENST00000410055 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
PDK1-203ENST00000410055 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
PDK1-203ENST00000410055 ERC2O15083 957 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 CHAMP1Q96JM3 812 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
PDK1-203ENST00000410055 GOLGA6L22H0YM25 854 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 TSC1Q92574 1164 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 ST18O60284 1047 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 ANO2Q9NQ90 1003 aa20.28■□□□□ 0.84
PDK1-203ENST00000410055 GNAI3P08754 354 aa20.27■□□□□ 0.84
PDK1-203ENST00000410055 NEK4P51957 841 aa20.27■□□□□ 0.84
PDK1-203ENST00000410055 DNTTIP2Q5QJE6 756 aaKnown RBP20.27■□□□□ 0.84
PDK1-203ENST00000410055 MTERF4Q7Z6M4 381 aaKnown RBP20.27■□□□□ 0.84
PDK1-203ENST00000410055 PSME1Q06323 249 aa20.27■□□□□ 0.83
PDK1-203ENST00000410055 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.83
PDK1-203ENST00000410055 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.83
PDK1-203ENST00000410055 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
PDK1-203ENST00000410055 TERF1P54274 439 aa20.26■□□□□ 0.83
PDK1-203ENST00000410055 DHX37Q8IY37 1157 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms