RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 MIER1Q8N108 512 aa33.95■■■■□ 3.02
C2orf88-204ENST00000409870 NFE2L2Q16236 605 aa33.94■■■■□ 3.02
C2orf88-204ENST00000409870 PDGFDQ9GZP0 370 aaPredicted RBP33.93■■■■□ 3.02
C2orf88-204ENST00000409870 PPP1R1BQ9UD71 204 aaPredicted RBP33.93■■■■□ 3.02
C2orf88-204ENST00000409870 LY75O60449 1722 aa33.93■■■■□ 3.02
C2orf88-204ENST00000409870 RNMTO43148 476 aaKnown RBP33.92■■■■□ 3.02
C2orf88-204ENST00000409870 LGR6Q9HBX8 967 aa33.91■■■■□ 3.02
C2orf88-204ENST00000409870 TMOD3Q9NYL9 352 aa33.9■■■■□ 3.02
C2orf88-204ENST00000409870 PIGBQ92521 554 aa33.88■■■■□ 3.01
C2orf88-204ENST00000409870 CEMIPQ8WUJ3 1361 aa33.88■■■■□ 3.01
C2orf88-204ENST00000409870 HTATSF1O43719 755 aaKnown RBP33.87■■■■□ 3.01
C2orf88-204ENST00000409870 TMPOP42166 694 aaKnown RBP33.87■■■■□ 3.01
C2orf88-204ENST00000409870 IL17REQ8NFR9 667 aa33.87■■■■□ 3.01
C2orf88-204ENST00000409870 QSER1Q2KHR3 1735 aa33.87■■■■□ 3.01
C2orf88-204ENST00000409870 ZBTB7AO95365 584 aa33.87■■■■□ 3.01
C2orf88-204ENST00000409870 CABP4P57796 275 aa33.87■■■■□ 3.01
C2orf88-204ENST00000409870 LRRC4BQ9NT99 713 aa33.87■■■■□ 3.01
C2orf88-204ENST00000409870 SIPA1L3O60292 1781 aaPredicted RBP33.86■■■■□ 3.01
C2orf88-204ENST00000409870 RTF1Q92541 710 aaKnown RBP33.86■■■■□ 3.01
C2orf88-204ENST00000409870 SLC27A3Q5K4L6 730 aa33.85■■■■□ 3.01
C2orf88-204ENST00000409870 FAM9BQ8IZU0 186 aa33.85■■■■□ 3.01
C2orf88-204ENST00000409870 SLC52A2Q9HAB3 445 aa33.85■■■■□ 3.01
C2orf88-204ENST00000409870 ZNF827Q17R98 1081 aa33.83■■■■□ 3.01
C2orf88-204ENST00000409870 RIPK4P57078 832 aa33.82■■■■□ 3
C2orf88-204ENST00000409870 NFATC2IPQ8NCF5 419 aa33.82■■■■□ 3
C2orf88-204ENST00000409870 TUBGCP6Q96RT7 1819 aa33.82■■■■□ 3
C2orf88-204ENST00000409870 MCM10Q7L590 875 aa33.81■■■■□ 3
C2orf88-204ENST00000409870 RRP7AQ9Y3A4 280 aaKnown RBP33.81■■■■□ 3
C2orf88-204ENST00000409870 APAF1O14727 1248 aa33.79■■■■□ 3
C2orf88-204ENST00000409870 DCTN1Q14203 1278 aa33.79■■■■□ 3
C2orf88-204ENST00000409870 MTFR1LQ9H019 292 aa33.79■■■■□ 3
C2orf88-204ENST00000409870 TEFQ10587 303 aa33.79■■■■□ 3
C2orf88-204ENST00000409870 PALLDQ8WX93 1383 aa33.78■■■■□ 3
C2orf88-204ENST00000409870 PTGER2P43116 358 aa33.78■■■■□ 3
C2orf88-204ENST00000409870 LMOD3Q0VAK6 560 aa33.78■■■■□ 3
C2orf88-204ENST00000409870 ATF5Q9Y2D1 282 aaPredicted RBP33.78■■■■□ 3
C2orf88-204ENST00000409870 SMARCC1Q92922 1105 aaPredicted RBP33.77■■■■□ 3
C2orf88-204ENST00000409870 AKT1S1Q96B36 256 aa33.77■■■■□ 3
C2orf88-204ENST00000409870 ASAP1Q9ULH1 1129 aa33.77■■■■□ 3
C2orf88-204ENST00000409870 NEUROD2Q15784 382 aa33.76■■■□□ 2.99
C2orf88-204ENST00000409870 ATG3Q9NT62 314 aa33.76■■■□□ 2.99
C2orf88-204ENST00000409870 TRIM35Q9UPQ4 493 aa33.73■■■□□ 2.99
C2orf88-204ENST00000409870 C5P01031 1676 aa33.73■■■□□ 2.99
C2orf88-204ENST00000409870 KCNQ4P56696 695 aa33.72■■■□□ 2.99
C2orf88-204ENST00000409870 UBR2Q8IWV8 1755 aa33.72■■■□□ 2.99
C2orf88-204ENST00000409870 THUMPD2Q9BTF0 503 aaKnown RBP33.71■■■□□ 2.99
C2orf88-204ENST00000409870 CCNL1Q9UK58 526 aaPredicted RBP33.71■■■□□ 2.99
C2orf88-204ENST00000409870 SGIP1Q9BQI5 828 aa33.7■■■□□ 2.98
C2orf88-204ENST00000409870 ZNF831Q5JPB2 1677 aa33.69■■■□□ 2.98
C2orf88-204ENST00000409870 COL24A1Q17RW2 1714 aa33.68■■■□□ 2.98
C2orf88-204ENST00000409870 KCPQ6ZWJ8 1503 aa33.68■■■□□ 2.98
C2orf88-204ENST00000409870 TAF1LQ8IZX4 1826 aa33.67■■■□□ 2.98
C2orf88-204ENST00000409870 PNPLA7Q6ZV29 1317 aa33.67■■■□□ 2.98
C2orf88-204ENST00000409870 SLC39A6Q13433 755 aa33.66■■■□□ 2.98
C2orf88-204ENST00000409870 TFCP2L1Q9NZI6 479 aa33.66■■■□□ 2.98
C2orf88-204ENST00000409870 KDM3BQ7LBC6 1761 aa33.66■■■□□ 2.98
C2orf88-204ENST00000409870 CICQ96RK0 1608 aaPredicted RBP33.66■■■□□ 2.98
C2orf88-204ENST00000409870 LOC102724428A0A0B4J2F2 783 aa33.65■■■□□ 2.98
C2orf88-204ENST00000409870 SIK1P57059 783 aa33.65■■■□□ 2.98
C2orf88-204ENST00000409870 NCBP3Q53F19 620 aaKnown RBP33.65■■■□□ 2.98
C2orf88-204ENST00000409870 BTBD11A6QL63 1104 aa33.64■■■□□ 2.98
C2orf88-204ENST00000409870 TAF7Q15545 349 aaPredicted RBP33.64■■■□□ 2.98
C2orf88-204ENST00000409870 CCDC27Q2M243 656 aa33.62■■■□□ 2.97
C2orf88-204ENST00000409870 ZNF790Q6PG37 636 aa33.62■■■□□ 2.97
C2orf88-204ENST00000409870 SLC16A10Q8TF71 515 aa33.62■■■□□ 2.97
C2orf88-204ENST00000409870 SENP3-EIF4A1A0A087X0R7 540 aa33.62■■■□□ 2.97
C2orf88-204ENST00000409870 DCAF8L1A6NGE4 600 aa33.61■■■□□ 2.97
C2orf88-204ENST00000409870 TTC5Q8N0Z6 440 aa33.61■■■□□ 2.97
C2orf88-204ENST00000409870 RBM42Q9BTD8 480 aaKnown RBP33.61■■■□□ 2.97
C2orf88-204ENST00000409870 FHDC1Q9C0D6 1143 aaPredicted RBP33.61■■■□□ 2.97
C2orf88-204ENST00000409870 TJP1Q07157 1748 aa33.6■■■□□ 2.97
C2orf88-204ENST00000409870 PTCD1O75127 700 aaKnown RBP33.6■■■□□ 2.97
C2orf88-204ENST00000409870 SLC4A9Q96Q91 983 aa33.6■■■□□ 2.97
C2orf88-204ENST00000409870 ARXQ96QS3 562 aa33.59■■■□□ 2.97
C2orf88-204ENST00000409870 COL5A3P25940 1745 aaPredicted RBP33.58■■■□□ 2.97
C2orf88-204ENST00000409870 C4BP0C0L5 1744 aa33.58■■■□□ 2.97
C2orf88-204ENST00000409870 NGEFQ8N5V2 710 aa33.57■■■□□ 2.96
C2orf88-204ENST00000409870 KCNQ3O43525 872 aa33.56■■■□□ 2.96
C2orf88-204ENST00000409870 ATP6V1AP38606 617 aa33.56■■■□□ 2.96
C2orf88-204ENST00000409870 ITPK1Q13572 414 aa33.55■■■□□ 2.96
C2orf88-204ENST00000409870 WWC1Q8IX03 1113 aa33.55■■■□□ 2.96
C2orf88-204ENST00000409870 SYT17Q9BSW7 474 aa33.55■■■□□ 2.96
C2orf88-204ENST00000409870 BABAM1Q9NWV8 329 aa33.55■■■□□ 2.96
C2orf88-204ENST00000409870 MIS18AQ9NYP9 233 aa33.55■■■□□ 2.96
C2orf88-204ENST00000409870 HMGB2P26583 209 aaKnown RBP33.54■■■□□ 2.96
C2orf88-204ENST00000409870 CALD1Q05682 793 aaKnown RBP33.54■■■□□ 2.96
C2orf88-204ENST00000409870 ZNF496Q96IT1 587 aaPredicted RBP33.54■■■□□ 2.96
C2orf88-204ENST00000409870 HEG1Q9ULI3 1381 aa33.53■■■□□ 2.96
C2orf88-204ENST00000409870 VSIG10Q8N0Z9 540 aa33.53■■■□□ 2.96
C2orf88-204ENST00000409870 POLD1P28340 1107 aa33.52■■■□□ 2.96
C2orf88-204ENST00000409870 FMNL2Q96PY5 1086 aa33.52■■■□□ 2.96
C2orf88-204ENST00000409870 TSPYL4Q9UJ04 414 aa33.52■■■□□ 2.96
C2orf88-204ENST00000409870 SALL2Q9Y467 1007 aaPredicted RBP33.52■■■□□ 2.96
C2orf88-204ENST00000409870 LINC00116Q8NCU8 138 aa33.51■■■□□ 2.95
C2orf88-204ENST00000409870 CHL1O00533 1208 aa33.5■■■□□ 2.95
C2orf88-204ENST00000409870 CFAP44Q96MT7 982 aa33.5■■■□□ 2.95
C2orf88-204ENST00000409870 UBR3Q6ZT12 1888 aa33.49■■■□□ 2.95
C2orf88-204ENST00000409870 COL23A1Q86Y22 540 aaPredicted RBP33.48■■■□□ 2.95
C2orf88-204ENST00000409870 IFT57Q9NWB7 429 aa33.48■■■□□ 2.95
C2orf88-204ENST00000409870 MSH5O43196 834 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms