RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
KDM3A-202ENST00000409064 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
KDM3A-202ENST00000409064 TDO2P48775 406 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
KDM3A-202ENST00000409064 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
KDM3A-202ENST00000409064 GNPATO15228 680 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 ZSCAN25Q6NSZ9 544 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 NLRP3Q96P20 1036 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 NIP7Q9Y221 180 aaKnown RBP eCLIP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 DDX11L8A8MPP1 907 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 CHMP5Q9NZZ3 219 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 EXOC6BQ9Y2D4 811 aa12.1□□□□□ -0.47
KDM3A-202ENST00000409064 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-202ENST00000409064 TPM4P67936 248 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 XBP1P17861 261 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 EIF4A2Q14240 407 aaKnown RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 HIP1O00291 1037 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
KDM3A-202ENST00000409064 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
KDM3A-202ENST00000409064 ZFYVE16Q7Z3T8 1539 aa12.08□□□□□ -0.47
KDM3A-202ENST00000409064 USP5P45974 858 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.48
KDM3A-202ENST00000409064 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 FLIIQ13045 1269 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
KDM3A-202ENST00000409064 POLR1AO95602 1720 aaPredicted RBP12.08□□□□□ -0.48
KDM3A-202ENST00000409064 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 AIDAQ96BJ3 306 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 MAP3K2Q9Y2U5 619 aa12.08□□□□□ -0.48
KDM3A-202ENST00000409064 YTHDC2Q9H6S0 1430 aaKnown RBP12.08□□□□□ -0.48
KDM3A-202ENST00000409064 POLR3DP05423 398 aaPredicted RBP12.07□□□□□ -0.48
KDM3A-202ENST00000409064 AKAP4Q5JQC9 854 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 C22orf23Q9BZE7 217 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 BRMS1Q9HCU9 246 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 IP6K1Q92551 441 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 ATP7AQ04656 1500 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 CDC45O75419 566 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
KDM3A-202ENST00000409064 JDP2Q8WYK2 163 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 NSD2O96028 1365 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
KDM3A-202ENST00000409064 SSH1Q8WYL5 1049 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 EYA1Q99502 592 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 FLT4P35916 1363 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 PLEKHH1Q9ULM0 1364 aa12.07□□□□□ -0.48
KDM3A-202ENST00000409064 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
KDM3A-202ENST00000409064 SLC5A1P13866 664 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 PSMA5P28066 241 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 XAGE3Q8WTP9 111 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
KDM3A-202ENST00000409064 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 PRM3Q9NNZ6 103 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
KDM3A-202ENST00000409064 KDM2BQ8NHM5 1336 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 CEP89Q96ST8 783 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 RXRBP28702 533 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 TMEM132AQ24JP5 1023 aa12.06□□□□□ -0.48
KDM3A-202ENST00000409064 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
KDM3A-202ENST00000409064 TRPM2O94759 1503 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 NPATQ14207 1427 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 MINDY4BA8MYZ0 360 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 HOXC9P31274 260 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 NSFL1CQ9UNZ2 370 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms