RNA–Protein interactions for RNA: ENST00000408534.2

U3.38-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.38-201ENST00000408534 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
U3.38-201ENST00000408534 ELL2O00472 640 aaPredicted RBP11.71□□□□□ -0.53
U3.38-201ENST00000408534 UVSSAQ2YD98 709 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 C16orf71Q8IYS4 520 aaPredicted RBP11.71□□□□□ -0.53
U3.38-201ENST00000408534 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 SSH3Q8TE77 659 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 MEIS3Q99687 375 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 ESYT1Q9BSJ8 1104 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.53
U3.38-201ENST00000408534 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
U3.38-201ENST00000408534 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
U3.38-201ENST00000408534 RIMS1Q86UR5 1692 aaKnown RBP11.71□□□□□ -0.54
U3.38-201ENST00000408534 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
U3.38-201ENST00000408534 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
U3.38-201ENST00000408534 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 LETM1O95202 739 aaPredicted RBP11.69□□□□□ -0.54
U3.38-201ENST00000408534 CHMLP26374 656 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 POLA2Q14181 598 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
U3.38-201ENST00000408534 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 HSP90AB4PQ58FF6 505 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
U3.38-201ENST00000408534 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
U3.38-201ENST00000408534 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
U3.38-201ENST00000408534 TICAM2Q86XR7 235 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 KCNB2Q92953 911 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
U3.38-201ENST00000408534 TMX3Q96JJ7 454 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
U3.38-201ENST00000408534 MX1P20591 662 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 HSPA4P34932 840 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 FLIIQ13045 1269 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 MTX1Q13505 466 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
U3.38-201ENST00000408534 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
U3.38-201ENST00000408534 PHF14O94880 888 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 GLIPR1L2Q4G1C9 344 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 MCM10Q7L590 875 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 EYA1Q99502 592 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 TM6SF1Q9BZW5 370 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
U3.38-201ENST00000408534 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.54
U3.38-201ENST00000408534 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
U3.38-201ENST00000408534 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
U3.38-201ENST00000408534 USP44Q9H0E7 712 aa11.65□□□□□ -0.54
U3.38-201ENST00000408534 ALDH8A1Q9H2A2 487 aaPredicted RBP11.65□□□□□ -0.54
U3.38-201ENST00000408534 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
U3.38-201ENST00000408534 OVOS2A0A0G2JMS6 1433 aa11.65□□□□□ -0.54
U3.38-201ENST00000408534 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.54
U3.38-201ENST00000408534 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
U3.38-201ENST00000408534 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 NEK4P51957 841 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 G2E3Q7L622 706 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 MTERF4Q7Z6M4 381 aaKnown RBP11.64□□□□□ -0.55
U3.38-201ENST00000408534 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
U3.38-201ENST00000408534 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 NWD1Q149M9 1564 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
U3.38-201ENST00000408534 LTKP29376 864 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
U3.38-201ENST00000408534 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 ZKSCAN5Q9Y2L8 839 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
U3.38-201ENST00000408534 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
U3.38-201ENST00000408534 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 NCAPD2Q15021 1401 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 SGSM2O43147 1006 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
U3.38-201ENST00000408534 MSNP26038 577 aaKnown RBP11.62□□□□□ -0.55
U3.38-201ENST00000408534 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 RBSNQ9H1K0 784 aa11.62□□□□□ -0.55
U3.38-201ENST00000408534 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
U3.38-201ENST00000408534 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
U3.38-201ENST00000408534 HOXC9P31274 260 aa11.61□□□□□ -0.55
U3.38-201ENST00000408534 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
U3.38-201ENST00000408534 CAVIN1Q6NZI2 390 aaKnown RBP11.61□□□□□ -0.55
U3.38-201ENST00000408534 THEMISQ8N1K5 641 aaPredicted RBP11.61□□□□□ -0.55
U3.38-201ENST00000408534 ZGPATQ8N5A5 531 aaKnown RBP11.61□□□□□ -0.55
U3.38-201ENST00000408534 TTC14Q96N46 770 aa11.61□□□□□ -0.55
U3.38-201ENST00000408534 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
U3.38-201ENST00000408534 RAD50Q92878 1312 aa11.6□□□□□ -0.55
U3.38-201ENST00000408534 TSPOAP1O95153 1857 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms