RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

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Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.03
HERC3-203ENST00000407637 RASSF4Q9H2L5 321 aa15.27■□□□□ 0.03
HERC3-203ENST00000407637 RTL1A6NKG5 1358 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 MYO3AQ8NEV4 1616 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 RGS12O14924 1447 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 USP27XA6NNY8 438 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 CCDC192P0DO97 292 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 NOP2P46087 812 aaKnown RBP15.26■□□□□ 0.03
HERC3-203ENST00000407637 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
HERC3-203ENST00000407637 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 ERO1AQ96HE7 468 aa15.26■□□□□ 0.03
HERC3-203ENST00000407637 GEMIN8Q9NWZ8 242 aaKnown RBP15.26■□□□□ 0.03
HERC3-203ENST00000407637 INO80Q9ULG1 1556 aaPredicted RBP15.26■□□□□ 0.03
HERC3-203ENST00000407637 SYT10Q6XYQ8 523 aa15.25■□□□□ 0.03
HERC3-203ENST00000407637 CACTINQ8WUQ7 758 aaKnown RBP15.25■□□□□ 0.03
HERC3-203ENST00000407637 ZSCAN22P10073 491 aaPredicted RBP15.24■□□□□ 0.03
HERC3-203ENST00000407637 BMS1Q14692 1282 aaKnown RBP15.24■□□□□ 0.03
HERC3-203ENST00000407637 ARHGAP45Q92619 1136 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 FHOD1Q9Y613 1164 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 ATP10BO94823 1461 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 ELL2O00472 640 aaPredicted RBP15.24■□□□□ 0.03
HERC3-203ENST00000407637 TRIM66O15016 1216 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
HERC3-203ENST00000407637 GYS2P54840 703 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
HERC3-203ENST00000407637 TRIM5Q9C035 493 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 MAP3K4Q9Y6R4 1608 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 PTPRCP08575 1304 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 ZNF75DP51815 510 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 CCDC144BQ3MJ40 725 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 MRVI1Q9Y6F6 885 aa15.23■□□□□ 0.03
HERC3-203ENST00000407637 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 VAMP4O75379 141 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
HERC3-203ENST00000407637 LCMT1Q9UIC8 334 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 ATP10DQ9P241 1426 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
HERC3-203ENST00000407637 POLR3GO15318 223 aaPredicted RBP15.22■□□□□ 0.03
HERC3-203ENST00000407637 MCCP23508 829 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 GTF2A1P52655 376 aaPredicted RBP15.22■□□□□ 0.03
HERC3-203ENST00000407637 MUM1L1Q5H9M0 696 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 PLA2G4DQ86XP0 818 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
HERC3-203ENST00000407637 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
HERC3-203ENST00000407637 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 SLU7O95391 586 aaKnown RBP15.21■□□□□ 0.03
HERC3-203ENST00000407637 TYRO3Q06418 890 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 PTPN14Q15678 1187 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 QRICH2Q9H0J4 1663 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 ADGRF5Q8IZF2 1346 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
HERC3-203ENST00000407637 H2AFXP16104 143 aaPredicted RBP15.21■□□□□ 0.03
HERC3-203ENST00000407637 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 CLIP2Q9UDT6 1046 aa15.21■□□□□ 0.03
HERC3-203ENST00000407637 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.02
HERC3-203ENST00000407637 RAD50Q92878 1312 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 MYO1CO00159 1063 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 F13A1P00488 732 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 CLCN6P51797 869 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 STX6O43752 255 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 DNM1Q05193 864 aaKnown RBP15.2■□□□□ 0.02
HERC3-203ENST00000407637 CAMK4Q16566 473 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
HERC3-203ENST00000407637 SYT1P21579 422 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 PSEN1P49768 467 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 MMP14P50281 582 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 ST5P78524 1137 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 ERCC6LQ2NKX8 1250 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 ANO6Q4KMQ2 910 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 TSHZ3Q63HK5 1081 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 ANKRD44Q8N8A2 993 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
HERC3-203ENST00000407637 TEX35Q5T0J7 233 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 THUMPD2Q9BTF0 503 aaKnown RBP15.19■□□□□ 0.02
HERC3-203ENST00000407637 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
HERC3-203ENST00000407637 EXOC6BQ9Y2D4 811 aa15.19■□□□□ 0.02
HERC3-203ENST00000407637 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
HERC3-203ENST00000407637 DTNBO60941 627 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 CASQ1P31415 396 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 MAP3K11Q16584 847 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.18■□□□□ 0.02
HERC3-203ENST00000407637 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 LRRN4CLQ8ND94 238 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms