RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 DEF6Q9H4E7 631 aa20.39■□□□□ 0.85
KDSR-202ENST00000406396 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.85
KDSR-202ENST00000406396 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
KDSR-202ENST00000406396 ZSCAN25Q6NSZ9 544 aa20.39■□□□□ 0.85
KDSR-202ENST00000406396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.85
KDSR-202ENST00000406396 CDKL5O76039 1030 aa20.38■□□□□ 0.85
KDSR-202ENST00000406396 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
KDSR-202ENST00000406396 SYCP1Q15431 976 aa20.38■□□□□ 0.85
KDSR-202ENST00000406396 CTNNA3Q9UI47 895 aa20.38■□□□□ 0.85
KDSR-202ENST00000406396 ERLIN1O75477 346 aa20.37■□□□□ 0.85
KDSR-202ENST00000406396 MAP3K11Q16584 847 aa20.37■□□□□ 0.85
KDSR-202ENST00000406396 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
KDSR-202ENST00000406396 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
KDSR-202ENST00000406396 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
KDSR-202ENST00000406396 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
KDSR-202ENST00000406396 PDIA4P13667 645 aaKnown RBP20.37■□□□□ 0.85
KDSR-202ENST00000406396 NOL7Q9UMY1 257 aaKnown RBP20.37■□□□□ 0.85
KDSR-202ENST00000406396 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
KDSR-202ENST00000406396 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
KDSR-202ENST00000406396 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
KDSR-202ENST00000406396 CEP126Q9P2H0 1117 aa20.36■□□□□ 0.85
KDSR-202ENST00000406396 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
KDSR-202ENST00000406396 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
KDSR-202ENST00000406396 MX1P20591 662 aa20.35■□□□□ 0.85
KDSR-202ENST00000406396 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
KDSR-202ENST00000406396 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
KDSR-202ENST00000406396 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
KDSR-202ENST00000406396 GOLGA6L10A6NI86 522 aa20.34■□□□□ 0.85
KDSR-202ENST00000406396 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
KDSR-202ENST00000406396 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
KDSR-202ENST00000406396 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
KDSR-202ENST00000406396 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
KDSR-202ENST00000406396 ERLIN2O94905 339 aa20.34■□□□□ 0.85
KDSR-202ENST00000406396 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
KDSR-202ENST00000406396 ZHX3Q9H4I2 956 aa20.34■□□□□ 0.85
KDSR-202ENST00000406396 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.85
KDSR-202ENST00000406396 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
KDSR-202ENST00000406396 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.85
KDSR-202ENST00000406396 CAMK4Q16566 473 aa20.33■□□□□ 0.84
KDSR-202ENST00000406396 SMTNL1A8MU46 457 aa20.33■□□□□ 0.84
KDSR-202ENST00000406396 KIF1BPQ96EK5 621 aa20.33■□□□□ 0.84
KDSR-202ENST00000406396 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 UBAC1Q9BSL1 405 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
KDSR-202ENST00000406396 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 TDO2P48775 406 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 SOGA3Q5TF21 947 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
KDSR-202ENST00000406396 UHRF1BP1LA0JNW5 1464 aa20.31■□□□□ 0.84
KDSR-202ENST00000406396 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
KDSR-202ENST00000406396 NME9Q86XW9 330 aa20.31■□□□□ 0.84
KDSR-202ENST00000406396 PKNOX2Q96KN3 472 aa20.31■□□□□ 0.84
KDSR-202ENST00000406396 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
KDSR-202ENST00000406396 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
KDSR-202ENST00000406396 MCM10Q7L590 875 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
KDSR-202ENST00000406396 CFAP100Q494V2 611 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 NUP160Q12769 1436 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 NSD2O96028 1365 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 ABCC2Q92887 1545 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 PDCL2Q8N4E4 241 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 TBC1D2Q9BYX2 928 aa20.3■□□□□ 0.84
KDSR-202ENST00000406396 FOXO3O43524 673 aa20.29■□□□□ 0.84
KDSR-202ENST00000406396 KIAA0754O94854 1291 aa20.29■□□□□ 0.84
KDSR-202ENST00000406396 TMEM132AQ24JP5 1023 aa20.29■□□□□ 0.84
KDSR-202ENST00000406396 IMMTQ16891 758 aaKnown RBP20.29■□□□□ 0.84
KDSR-202ENST00000406396 UBXN4Q92575 508 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 ABCC11Q96J66 1382 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 SSFA2P28290 1259 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 WASF1Q92558 559 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 PDCL3Q9H2J4 239 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 CADPS2Q86UW7 1296 aa20.28■□□□□ 0.84
KDSR-202ENST00000406396 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
KDSR-202ENST00000406396 EPB41L2O43491 1005 aaKnown RBP20.27■□□□□ 0.84
KDSR-202ENST00000406396 IDH1O75874 414 aaKnown RBP20.27■□□□□ 0.84
KDSR-202ENST00000406396 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
KDSR-202ENST00000406396 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.83
KDSR-202ENST00000406396 CALRP27797 417 aaKnown RBP20.27■□□□□ 0.83
KDSR-202ENST00000406396 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.83
KDSR-202ENST00000406396 STARD3NLO95772 234 aa20.26■□□□□ 0.83
KDSR-202ENST00000406396 NEFHP12036 1026 aa20.26■□□□□ 0.83
KDSR-202ENST00000406396 FAM193AP78312 1265 aa20.26■□□□□ 0.83
KDSR-202ENST00000406396 IQCEQ6IPM2 695 aa20.26■□□□□ 0.83
KDSR-202ENST00000406396 TNPO1Q92973 898 aaKnown RBP20.26■□□□□ 0.83
KDSR-202ENST00000406396 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
KDSR-202ENST00000406396 CENPHQ9H3R5 247 aa20.26■□□□□ 0.83
KDSR-202ENST00000406396 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
KDSR-202ENST00000406396 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
KDSR-202ENST00000406396 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
KDSR-202ENST00000406396 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
KDSR-202ENST00000406396 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
KDSR-202ENST00000406396 RAI14Q9P0K7 980 aa20.25■□□□□ 0.83
KDSR-202ENST00000406396 CCDC102AQ96A19 550 aa20.25■□□□□ 0.83
KDSR-202ENST00000406396 BMP2KQ9NSY1 1161 aaPredicted RBP20.25■□□□□ 0.83
KDSR-202ENST00000406396 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
KDSR-202ENST00000406396 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
KDSR-202ENST00000406396 SH2B1Q9NRF2 756 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms