RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 ARXQ96QS3 562 aa21.96■■□□□ 1.11
CGREF1-206ENST00000405600 FHDC1Q9C0D6 1143 aaPredicted RBP21.96■■□□□ 1.11
CGREF1-206ENST00000405600 HSP90AB1P08238 724 aaKnown RBP21.95■■□□□ 1.1
CGREF1-206ENST00000405600 POLD1P28340 1107 aa21.94■■□□□ 1.1
CGREF1-206ENST00000405600 COL3A1P02461 1466 aaPredicted RBP21.93■■□□□ 1.1
CGREF1-206ENST00000405600 SLC16A10Q8TF71 515 aa21.93■■□□□ 1.1
CGREF1-206ENST00000405600 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
CGREF1-206ENST00000405600 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
CGREF1-206ENST00000405600 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
CGREF1-206ENST00000405600 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
CGREF1-206ENST00000405600 COL23A1Q86Y22 540 aaPredicted RBP21.92■■□□□ 1.1
CGREF1-206ENST00000405600 AK7Q96M32 723 aa21.92■■□□□ 1.1
CGREF1-206ENST00000405600 SGIP1Q9BQI5 828 aa21.92■■□□□ 1.1
CGREF1-206ENST00000405600 SYT17Q9BSW7 474 aa21.92■■□□□ 1.1
CGREF1-206ENST00000405600 HMOX1P09601 288 aa21.91■■□□□ 1.1
CGREF1-206ENST00000405600 MSL1Q68DK7 614 aa21.91■■□□□ 1.1
CGREF1-206ENST00000405600 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
CGREF1-206ENST00000405600 C5P01031 1676 aa21.91■■□□□ 1.1
CGREF1-206ENST00000405600 PHF14O94880 888 aa21.9■■□□□ 1.1
CGREF1-206ENST00000405600 U2AF1L5P0DN76 240 aaPredicted RBP21.9■■□□□ 1.1
CGREF1-206ENST00000405600 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
CGREF1-206ENST00000405600 U2AF1Q01081 240 aaKnown RBP eCLIP21.9■■□□□ 1.1
CGREF1-206ENST00000405600 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
CGREF1-206ENST00000405600 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.1
CGREF1-206ENST00000405600 HMGB2P26583 209 aaKnown RBP21.89■■□□□ 1.1
CGREF1-206ENST00000405600 SIK1P57059 783 aa21.89■■□□□ 1.1
CGREF1-206ENST00000405600 CABP4P57796 275 aa21.89■■□□□ 1.1
CGREF1-206ENST00000405600 SMIM5Q71RC9 77 aa21.89■■□□□ 1.1
CGREF1-206ENST00000405600 DCAF5Q96JK2 942 aa21.89■■□□□ 1.1
CGREF1-206ENST00000405600 QSER1Q2KHR3 1735 aa21.88■■□□□ 1.09
CGREF1-206ENST00000405600 ATG3Q9NT62 314 aa21.88■■□□□ 1.09
CGREF1-206ENST00000405600 ERVV-2B6SEH9 535 aa21.87■■□□□ 1.09
CGREF1-206ENST00000405600 NEFMP07197 916 aa21.87■■□□□ 1.09
CGREF1-206ENST00000405600 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
CGREF1-206ENST00000405600 TAF1LQ8IZX4 1826 aa21.86■■□□□ 1.09
CGREF1-206ENST00000405600 YY1P25490 414 aa21.85■■□□□ 1.09
CGREF1-206ENST00000405600 CCDC146Q8IYE0 955 aa21.85■■□□□ 1.09
CGREF1-206ENST00000405600 LINC00116Q8NCU8 138 aa21.85■■□□□ 1.09
CGREF1-206ENST00000405600 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
CGREF1-206ENST00000405600 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
CGREF1-206ENST00000405600 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
CGREF1-206ENST00000405600 C4BP0C0L5 1744 aa21.84■■□□□ 1.09
CGREF1-206ENST00000405600 ITPK1Q13572 414 aa21.83■■□□□ 1.09
CGREF1-206ENST00000405600 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
CGREF1-206ENST00000405600 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.09
CGREF1-206ENST00000405600 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.09
CGREF1-206ENST00000405600 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
CGREF1-206ENST00000405600 APAF1O14727 1248 aa21.82■■□□□ 1.08
CGREF1-206ENST00000405600 GNPATO15228 680 aa21.82■■□□□ 1.08
CGREF1-206ENST00000405600 FCHSD2O94868 740 aa21.82■■□□□ 1.08
CGREF1-206ENST00000405600 NEFLP07196 543 aa21.82■■□□□ 1.08
CGREF1-206ENST00000405600 KDM6AO15550 1401 aaPredicted RBP21.82■■□□□ 1.08
CGREF1-206ENST00000405600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.81■■□□□ 1.08
CGREF1-206ENST00000405600 AMIGO3Q86WK7 504 aa21.81■■□□□ 1.08
CGREF1-206ENST00000405600 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
CGREF1-206ENST00000405600 PTCD1O75127 700 aaKnown RBP21.8■■□□□ 1.08
CGREF1-206ENST00000405600 GPR162Q16538 588 aa21.8■■□□□ 1.08
CGREF1-206ENST00000405600 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
CGREF1-206ENST00000405600 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
CGREF1-206ENST00000405600 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
CGREF1-206ENST00000405600 LGR6Q9HBX8 967 aa21.79■■□□□ 1.08
CGREF1-206ENST00000405600 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
CGREF1-206ENST00000405600 CCDC27Q2M243 656 aa21.77■■□□□ 1.07
CGREF1-206ENST00000405600 NLGN2Q8NFZ4 835 aa21.77■■□□□ 1.07
CGREF1-206ENST00000405600 SLC4A9Q96Q91 983 aa21.77■■□□□ 1.07
CGREF1-206ENST00000405600 SSFA2P28290 1259 aa21.76■■□□□ 1.07
CGREF1-206ENST00000405600 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
CGREF1-206ENST00000405600 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
CGREF1-206ENST00000405600 RTCBQ9Y3I0 505 aaKnown RBP21.75■■□□□ 1.07
CGREF1-206ENST00000405600 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
CGREF1-206ENST00000405600 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
CGREF1-206ENST00000405600 RNMTO43148 476 aaKnown RBP21.74■■□□□ 1.07
CGREF1-206ENST00000405600 TRAPPC3LQ5T215 181 aa21.74■■□□□ 1.07
CGREF1-206ENST00000405600 GNAT3A8MTJ3 354 aa21.73■■□□□ 1.07
CGREF1-206ENST00000405600 PLEKHF1Q96S99 279 aa21.73■■□□□ 1.07
CGREF1-206ENST00000405600 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
CGREF1-206ENST00000405600 SLC39A6Q13433 755 aa21.72■■□□□ 1.07
CGREF1-206ENST00000405600 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
CGREF1-206ENST00000405600 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
CGREF1-206ENST00000405600 E9PSI1 815 aa21.71■■□□□ 1.07
CGREF1-206ENST00000405600 WDR63Q8IWG1 891 aa21.71■■□□□ 1.07
CGREF1-206ENST00000405600 WWC1Q8IX03 1113 aa21.7■■□□□ 1.06
CGREF1-206ENST00000405600 SUPT16HQ9Y5B9 1047 aaKnown RBP21.7■■□□□ 1.06
CGREF1-206ENST00000405600 RFC4P35249 363 aa21.69■■□□□ 1.06
CGREF1-206ENST00000405600 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
CGREF1-206ENST00000405600 WWC3Q9ULE0 1092 aa21.69■■□□□ 1.06
CGREF1-206ENST00000405600 MRC1P22897 1456 aa21.68■■□□□ 1.06
CGREF1-206ENST00000405600 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
CGREF1-206ENST00000405600 NEUROD2Q15784 382 aa21.68■■□□□ 1.06
CGREF1-206ENST00000405600 RC3H1Q5TC82 1133 aaKnown RBP21.68■■□□□ 1.06
CGREF1-206ENST00000405600 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
CGREF1-206ENST00000405600 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
CGREF1-206ENST00000405600 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
CGREF1-206ENST00000405600 SLFN5Q08AF3 891 aa21.67■■□□□ 1.06
CGREF1-206ENST00000405600 TEFQ10587 303 aa21.67■■□□□ 1.06
CGREF1-206ENST00000405600 CDCA7LQ96GN5 454 aa21.67■■□□□ 1.06
CGREF1-206ENST00000405600 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
CGREF1-206ENST00000405600 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
CGREF1-206ENST00000405600 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
CGREF1-206ENST00000405600 CNTNAP4Q9C0A0 1308 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms