RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 KAT6BQ8WYB5 2073 aa28.63■■■□□ 2.17
EPCAM-202ENST00000405271 TRMT2AQ8IZ69 625 aaKnown RBP28.63■■■□□ 2.17
EPCAM-202ENST00000405271 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
EPCAM-202ENST00000405271 MYH16Q9H6N6 1097 aa28.63■■■□□ 2.17
EPCAM-202ENST00000405271 IFT57Q9NWB7 429 aa28.63■■■□□ 2.17
EPCAM-202ENST00000405271 RNMTO43148 476 aaKnown RBP28.62■■■□□ 2.17
EPCAM-202ENST00000405271 GNAI1P63096 354 aa28.62■■■□□ 2.17
EPCAM-202ENST00000405271 IL17REQ8NFR9 667 aa28.62■■■□□ 2.17
EPCAM-202ENST00000405271 BCL9O00512 1426 aa28.61■■■□□ 2.17
EPCAM-202ENST00000405271 EZH2Q15910 746 aaKnown RBP28.61■■■□□ 2.17
EPCAM-202ENST00000405271 DCAF5Q96JK2 942 aa28.61■■■□□ 2.17
EPCAM-202ENST00000405271 SPINK5Q9NQ38 1064 aaPredicted RBP28.61■■■□□ 2.17
EPCAM-202ENST00000405271 PAPPAQ13219 1627 aa28.61■■■□□ 2.17
EPCAM-202ENST00000405271 NKX1-1Q15270 411 aaPredicted RBP28.6■■■□□ 2.17
EPCAM-202ENST00000405271 DUSP27Q5VZP5 1158 aa28.6■■■□□ 2.17
EPCAM-202ENST00000405271 MPRIPQ6WCQ1 1025 aa28.6■■■□□ 2.17
EPCAM-202ENST00000405271 PTF1AQ7RTS3 328 aa28.59■■■□□ 2.17
EPCAM-202ENST00000405271 CFAP44Q96MT7 982 aa28.59■■■□□ 2.17
EPCAM-202ENST00000405271 TNS1Q9HBL0 1735 aaKnown RBP28.59■■■□□ 2.17
EPCAM-202ENST00000405271 BCL11BQ9C0K0 894 aaPredicted RBP28.59■■■□□ 2.17
EPCAM-202ENST00000405271 ZNF853P0CG23 659 aa28.58■■■□□ 2.17
EPCAM-202ENST00000405271 DDX54Q8TDD1 881 aaKnown RBP28.58■■■□□ 2.17
EPCAM-202ENST00000405271 SBF2Q86WG5 1849 aa28.57■■■□□ 2.16
EPCAM-202ENST00000405271 UBR2Q8IWV8 1755 aa28.57■■■□□ 2.16
EPCAM-202ENST00000405271 LGR6Q9HBX8 967 aa28.57■■■□□ 2.16
EPCAM-202ENST00000405271 FANCIQ9NVI1 1328 aa28.57■■■□□ 2.16
EPCAM-202ENST00000405271 BABAM1Q9NWV8 329 aa28.56■■■□□ 2.16
EPCAM-202ENST00000405271 TEFQ10587 303 aa28.55■■■□□ 2.16
EPCAM-202ENST00000405271 LAS1LQ9Y4W2 734 aaKnown RBP28.53■■■□□ 2.16
EPCAM-202ENST00000405271 CHL1O00533 1208 aa28.53■■■□□ 2.16
EPCAM-202ENST00000405271 KCNQ2O43526 872 aa28.53■■■□□ 2.16
EPCAM-202ENST00000405271 CACNA1FO60840 1977 aa28.53■■■□□ 2.16
EPCAM-202ENST00000405271 TAF7Q15545 349 aaPredicted RBP28.52■■■□□ 2.16
EPCAM-202ENST00000405271 NHSQ6T4R5 1651 aa28.51■■■□□ 2.15
EPCAM-202ENST00000405271 PLSCR1O15162 318 aa28.51■■■□□ 2.15
EPCAM-202ENST00000405271 TSR2Q969E8 191 aaKnown RBP28.51■■■□□ 2.15
EPCAM-202ENST00000405271 SLC52A2Q9HAB3 445 aa28.51■■■□□ 2.15
EPCAM-202ENST00000405271 MBIPQ9NS73 344 aa28.51■■■□□ 2.15
EPCAM-202ENST00000405271 ERVV-2B6SEH9 535 aa28.5■■■□□ 2.15
EPCAM-202ENST00000405271 ACSBG1Q96GR2 724 aa28.49■■■□□ 2.15
EPCAM-202ENST00000405271 TSPYL4Q9UJ04 414 aa28.48■■■□□ 2.15
EPCAM-202ENST00000405271 LAMB4A4D0S4 1761 aa28.48■■■□□ 2.15
EPCAM-202ENST00000405271 CABP4P57796 275 aa28.45■■■□□ 2.15
EPCAM-202ENST00000405271 C5P01031 1676 aa28.45■■■□□ 2.14
EPCAM-202ENST00000405271 PSDA5PKW4 1024 aaPredicted RBP28.44■■■□□ 2.14
EPCAM-202ENST00000405271 CT47B1P0C2W7 299 aaPredicted RBP28.44■■■□□ 2.14
EPCAM-202ENST00000405271 BTBD11A6QL63 1104 aa28.43■■■□□ 2.14
EPCAM-202ENST00000405271 PROM2Q8N271 834 aa28.43■■■□□ 2.14
EPCAM-202ENST00000405271 BTAF1O14981 1849 aa28.43■■■□□ 2.14
EPCAM-202ENST00000405271 EXOSC9Q06265 439 aaKnown RBP28.43■■■□□ 2.14
EPCAM-202ENST00000405271 R3HDM1Q15032 1099 aaKnown RBP28.42■■■□□ 2.14
EPCAM-202ENST00000405271 NFATC2IPQ8NCF5 419 aa28.42■■■□□ 2.14
EPCAM-202ENST00000405271 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
EPCAM-202ENST00000405271 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.14
EPCAM-202ENST00000405271 PRIM1P49642 420 aaKnown RBP28.38■■■□□ 2.13
EPCAM-202ENST00000405271 NBPF14Q5TI25 921 aa28.38■■■□□ 2.13
EPCAM-202ENST00000405271 SOS1Q07889 1333 aaPredicted RBP28.38■■■□□ 2.13
EPCAM-202ENST00000405271 KCPQ6ZWJ8 1503 aa28.37■■■□□ 2.13
EPCAM-202ENST00000405271 CICQ96RK0 1608 aaPredicted RBP28.37■■■□□ 2.13
EPCAM-202ENST00000405271 RCAN3Q9UKA8 241 aa28.37■■■□□ 2.13
EPCAM-202ENST00000405271 TXNRD1Q16881 649 aa28.36■■■□□ 2.13
EPCAM-202ENST00000405271 ZNF428Q96B54 188 aa28.36■■■□□ 2.13
EPCAM-202ENST00000405271 ZNF831Q5JPB2 1677 aa28.36■■■□□ 2.13
EPCAM-202ENST00000405271 ZNF790Q6PG37 636 aa28.35■■■□□ 2.13
EPCAM-202ENST00000405271 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
EPCAM-202ENST00000405271 TWISTNBQ3B726 338 aaPredicted RBP28.34■■■□□ 2.13
EPCAM-202ENST00000405271 RREB1Q92766 1687 aa28.34■■■□□ 2.13
EPCAM-202ENST00000405271 EIF4A1P60842 406 aaKnown RBP28.33■■■□□ 2.13
EPCAM-202ENST00000405271 TTC5Q8N0Z6 440 aa28.33■■■□□ 2.13
EPCAM-202ENST00000405271 C8orf58Q8NAV2 365 aa28.33■■■□□ 2.13
EPCAM-202ENST00000405271 LY75O60449 1722 aa28.32■■■□□ 2.12
EPCAM-202ENST00000405271 HEG1Q9ULI3 1381 aa28.32■■■□□ 2.12
EPCAM-202ENST00000405271 KCNQ3O43525 872 aa28.31■■■□□ 2.12
EPCAM-202ENST00000405271 TSPYL6Q8N831 410 aa28.31■■■□□ 2.12
EPCAM-202ENST00000405271 TJP1Q07157 1748 aa28.31■■■□□ 2.12
EPCAM-202ENST00000405271 RGPD3A6NKT7 1758 aaPredicted RBP28.3■■■□□ 2.12
EPCAM-202ENST00000405271 RGPD4Q7Z3J3 1758 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 VAMP4O75379 141 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 HOXB7P09629 217 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 SLC39A6Q13433 755 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 PIGBQ92521 554 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 NUP188Q5SRE5 1749 aa28.3■■■□□ 2.12
EPCAM-202ENST00000405271 KRT24Q2M2I5 525 aa28.29■■■□□ 2.12
EPCAM-202ENST00000405271 ANO8Q9HCE9 1232 aaPredicted RBP28.28■■■□□ 2.12
EPCAM-202ENST00000405271 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
EPCAM-202ENST00000405271 ALDH1L2Q3SY69 923 aa28.27■■■□□ 2.12
EPCAM-202ENST00000405271 FMNL2Q96PY5 1086 aa28.27■■■□□ 2.12
EPCAM-202ENST00000405271 COL5A3P25940 1745 aaPredicted RBP28.26■■■□□ 2.11
EPCAM-202ENST00000405271 RARSP54136 660 aaKnown RBP28.26■■■□□ 2.11
EPCAM-202ENST00000405271 CHMP4AQ9BY43 222 aa28.25■■■□□ 2.11
EPCAM-202ENST00000405271 ZNF496Q96IT1 587 aaPredicted RBP28.24■■■□□ 2.11
EPCAM-202ENST00000405271 LRRC4BQ9NT99 713 aa28.24■■■□□ 2.11
EPCAM-202ENST00000405271 TAF1LQ8IZX4 1826 aa28.24■■■□□ 2.11
EPCAM-202ENST00000405271 ATG3Q9NT62 314 aa28.23■■■□□ 2.11
EPCAM-202ENST00000405271 GIGYF1O75420 1035 aaPredicted RBP28.23■■■□□ 2.11
EPCAM-202ENST00000405271 SUPT16HQ9Y5B9 1047 aaKnown RBP28.23■■■□□ 2.11
EPCAM-202ENST00000405271 RNF123Q5XPI4 1314 aa28.22■■■□□ 2.11
EPCAM-202ENST00000405271 ASAP1Q9ULH1 1129 aa28.22■■■□□ 2.11
EPCAM-202ENST00000405271 SMC4Q9NTJ3 1288 aa28.21■■■□□ 2.11
EPCAM-202ENST00000405271 N4BP2Q86UW6 1770 aaPredicted RBP28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms