RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 WAPLQ7Z5K2 1190 aa18.92■□□□□ 0.62
ATG4B-205ENST00000404914 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-205ENST00000404914 TSPY26PQ9H489 355 aa18.91■□□□□ 0.62
ATG4B-205ENST00000404914 AEBP1Q8IUX7 1158 aa18.91■□□□□ 0.62
ATG4B-205ENST00000404914 THEMISQ8N1K5 641 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-205ENST00000404914 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 PDE1AP54750 535 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 SLIT1O75093 1534 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 MBD3O95983 291 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 TXNDC2Q86VQ3 553 aa18.9■□□□□ 0.62
ATG4B-205ENST00000404914 HSPA2P54652 639 aa18.89■□□□□ 0.61
ATG4B-205ENST00000404914 UPF3BQ9BZI7 483 aaKnown RBP18.89■□□□□ 0.61
ATG4B-205ENST00000404914 ZNF710Q8N1W2 664 aa18.89■□□□□ 0.61
ATG4B-205ENST00000404914 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
ATG4B-205ENST00000404914 F6X3S4 739 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 KIAA2012Q0VF49 1180 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 CUL4AQ13619 759 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 MCM10Q7L590 875 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 TTC12Q9H892 705 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-205ENST00000404914 USP25Q9UHP3 1055 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 EXOC6BQ9Y2D4 811 aa18.88■□□□□ 0.61
ATG4B-205ENST00000404914 DTNBO60941 627 aa18.87■□□□□ 0.61
ATG4B-205ENST00000404914 IL25Q9H293 177 aa18.87■□□□□ 0.61
ATG4B-205ENST00000404914 G2E3Q7L622 706 aa18.87■□□□□ 0.61
ATG4B-205ENST00000404914 USP48Q86UV5 1035 aa18.87■□□□□ 0.61
ATG4B-205ENST00000404914 ZHX1Q9UKY1 873 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-205ENST00000404914 ESYT1Q9BSJ8 1104 aa18.86■□□□□ 0.61
ATG4B-205ENST00000404914 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
ATG4B-205ENST00000404914 DNTTIP2Q5QJE6 756 aaKnown RBP18.86■□□□□ 0.61
ATG4B-205ENST00000404914 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
ATG4B-205ENST00000404914 SETD1AO15047 1707 aaKnown RBP18.85■□□□□ 0.61
ATG4B-205ENST00000404914 MYRIPQ8NFW9 859 aa18.85■□□□□ 0.61
ATG4B-205ENST00000404914 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.85■□□□□ 0.61
ATG4B-205ENST00000404914 LMTK3Q96Q04 1460 aa18.85■□□□□ 0.61
ATG4B-205ENST00000404914 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
ATG4B-205ENST00000404914 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
ATG4B-205ENST00000404914 SMAP1Q8IYB5 467 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-205ENST00000404914 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
ATG4B-205ENST00000404914 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
ATG4B-205ENST00000404914 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-205ENST00000404914 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.61
ATG4B-205ENST00000404914 OSBPL3Q9H4L5 887 aa18.83■□□□□ 0.6
ATG4B-205ENST00000404914 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
ATG4B-205ENST00000404914 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
ATG4B-205ENST00000404914 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
ATG4B-205ENST00000404914 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
ATG4B-205ENST00000404914 CPSF1Q10570 1443 aaKnown RBP18.82■□□□□ 0.6
ATG4B-205ENST00000404914 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
ATG4B-205ENST00000404914 CCDC94Q9BW85 323 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-205ENST00000404914 HCLS1P14317 486 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-205ENST00000404914 NOLC1Q14978 699 aaKnown RBP eCLIP18.82■□□□□ 0.6
ATG4B-205ENST00000404914 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
ATG4B-205ENST00000404914 ADAMTS13Q76LX8 1427 aa18.82■□□□□ 0.6
ATG4B-205ENST00000404914 METP08581 1390 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 CPS1P31327 1500 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 CHL1O00533 1208 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 PIBF1Q8WXW3 757 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 ADCY5O95622 1261 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 CNPY2Q9Y2B0 182 aa18.81■□□□□ 0.6
ATG4B-205ENST00000404914 CHMLP26374 656 aa18.8■□□□□ 0.6
ATG4B-205ENST00000404914 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
ATG4B-205ENST00000404914 MTERF4Q7Z6M4 381 aaKnown RBP18.8■□□□□ 0.6
ATG4B-205ENST00000404914 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
ATG4B-205ENST00000404914 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
ATG4B-205ENST00000404914 ATP7BP35670 1465 aa18.8■□□□□ 0.6
ATG4B-205ENST00000404914 AP5Z1O43299 807 aa18.79■□□□□ 0.6
ATG4B-205ENST00000404914 RPAP1Q9BWH6 1393 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-205ENST00000404914 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
ATG4B-205ENST00000404914 ZSCAN20P17040 1043 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-205ENST00000404914 PNMA6EA0A0J9YXQ4 647 aa18.79■□□□□ 0.6
ATG4B-205ENST00000404914 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
ATG4B-205ENST00000404914 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
ATG4B-205ENST00000404914 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
ATG4B-205ENST00000404914 CBX1P83916 185 aa18.78■□□□□ 0.6
ATG4B-205ENST00000404914 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
ATG4B-205ENST00000404914 KIAA0232Q92628 1395 aa18.78■□□□□ 0.6
ATG4B-205ENST00000404914 SYAP1Q96A49 352 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-205ENST00000404914 PTPRCP08575 1304 aa18.77■□□□□ 0.6
ATG4B-205ENST00000404914 MX1P20591 662 aa18.77■□□□□ 0.6
ATG4B-205ENST00000404914 MCM2P49736 904 aa18.77■□□□□ 0.6
ATG4B-205ENST00000404914 FOXO3O43524 673 aa18.76■□□□□ 0.59
ATG4B-205ENST00000404914 HMMRO75330 724 aa18.76■□□□□ 0.59
ATG4B-205ENST00000404914 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
ATG4B-205ENST00000404914 MAP4K4O95819 1239 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-205ENST00000404914 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
ATG4B-205ENST00000404914 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
ATG4B-205ENST00000404914 COG3Q96JB2 828 aa18.75■□□□□ 0.59
ATG4B-205ENST00000404914 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 KCNF1Q9H3M0 494 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 PYCARDQ9ULZ3 195 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 STRCQ7RTU9 1775 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 DMTNQ08495 405 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 GIMAP6Q6P9H5 292 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
ATG4B-205ENST00000404914 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
ATG4B-205ENST00000404914 MCCP23508 829 aa18.73■□□□□ 0.59
ATG4B-205ENST00000404914 GTF2F1P35269 517 aaKnown RBP eCLIP18.73■□□□□ 0.592e-8■■■■■ 34.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms