RNA–Protein interactions for RNA: ENST00000404276.5

CHEK2-208, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-208ENST00000404276 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
CHEK2-208ENST00000404276 RGS12O14924 1447 aa13.57□□□□□ -0.24
CHEK2-208ENST00000404276 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
CHEK2-208ENST00000404276 BCL9O00512 1426 aa13.56□□□□□ -0.24
CHEK2-208ENST00000404276 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
CHEK2-208ENST00000404276 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
CHEK2-208ENST00000404276 ITGB4P16144 1822 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
CHEK2-208ENST00000404276 CABP4P57796 275 aa13.54□□□□□ -0.24
CHEK2-208ENST00000404276 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
CHEK2-208ENST00000404276 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
CHEK2-208ENST00000404276 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
CHEK2-208ENST00000404276 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
CHEK2-208ENST00000404276 PRIM1P49642 420 aaKnown RBP13.53□□□□□ -0.24
CHEK2-208ENST00000404276 PIGBQ92521 554 aa13.53□□□□□ -0.24
CHEK2-208ENST00000404276 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
CHEK2-208ENST00000404276 SBF2Q86WG5 1849 aa13.51□□□□□ -0.25
CHEK2-208ENST00000404276 KCNQ2O43526 872 aa13.51□□□□□ -0.25
CHEK2-208ENST00000404276 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
CHEK2-208ENST00000404276 KCNQ3O43525 872 aa13.5□□□□□ -0.25
CHEK2-208ENST00000404276 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
CHEK2-208ENST00000404276 ZNF790Q6PG37 636 aa13.5□□□□□ -0.25
CHEK2-208ENST00000404276 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
CHEK2-208ENST00000404276 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
CHEK2-208ENST00000404276 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
CHEK2-208ENST00000404276 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
CHEK2-208ENST00000404276 KRT24Q2M2I5 525 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
CHEK2-208ENST00000404276 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
CHEK2-208ENST00000404276 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
CHEK2-208ENST00000404276 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
CHEK2-208ENST00000404276 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
CHEK2-208ENST00000404276 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
CHEK2-208ENST00000404276 KCPQ6ZWJ8 1503 aa13.47□□□□□ -0.25
CHEK2-208ENST00000404276 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
CHEK2-208ENST00000404276 TTC5Q8N0Z6 440 aa13.46□□□□□ -0.25
CHEK2-208ENST00000404276 BTAF1O14981 1849 aa13.46□□□□□ -0.25
CHEK2-208ENST00000404276 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-208ENST00000404276 VAMP4O75379 141 aa13.45□□□□□ -0.26
CHEK2-208ENST00000404276 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-208ENST00000404276 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-208ENST00000404276 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-208ENST00000404276 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-208ENST00000404276 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
CHEK2-208ENST00000404276 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
CHEK2-208ENST00000404276 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
CHEK2-208ENST00000404276 TRIM37O94972 964 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 HOXB7P09629 217 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
CHEK2-208ENST00000404276 C5P01031 1676 aa13.42□□□□□ -0.26
CHEK2-208ENST00000404276 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
CHEK2-208ENST00000404276 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
CHEK2-208ENST00000404276 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
CHEK2-208ENST00000404276 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
CHEK2-208ENST00000404276 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
CHEK2-208ENST00000404276 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
CHEK2-208ENST00000404276 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
CHEK2-208ENST00000404276 SIK1P57059 783 aa13.4□□□□□ -0.26
CHEK2-208ENST00000404276 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
CHEK2-208ENST00000404276 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
CHEK2-208ENST00000404276 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
CHEK2-208ENST00000404276 LY75O60449 1722 aa13.4□□□□□ -0.27
CHEK2-208ENST00000404276 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
CHEK2-208ENST00000404276 LAMB4A4D0S4 1761 aa13.39□□□□□ -0.27
CHEK2-208ENST00000404276 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
CHEK2-208ENST00000404276 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
CHEK2-208ENST00000404276 TJP1Q07157 1748 aa13.38□□□□□ -0.27
CHEK2-208ENST00000404276 BCAR3O75815 825 aa13.38□□□□□ -0.27
CHEK2-208ENST00000404276 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
CHEK2-208ENST00000404276 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
CHEK2-208ENST00000404276 CCDC30Q5VVM6 783 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 CACNA1FO60840 1977 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
CHEK2-208ENST00000404276 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
CHEK2-208ENST00000404276 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 TEX13AQ9BXU3 409 aaPredicted RBP13.37□□□□□ -0.27
CHEK2-208ENST00000404276 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
CHEK2-208ENST00000404276 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
CHEK2-208ENST00000404276 PLSCR1O15162 318 aa13.36□□□□□ -0.27
CHEK2-208ENST00000404276 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
CHEK2-208ENST00000404276 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
CHEK2-208ENST00000404276 ITPK1Q13572 414 aa13.36□□□□□ -0.27
CHEK2-208ENST00000404276 PDIA6Q15084 440 aa13.36□□□□□ -0.27
CHEK2-208ENST00000404276 APBA3O96018 575 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms