RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KDM6AO15550 1401 aaPredicted RBP17.93■□□□□ 0.46
SDF4-203ENST00000403997 ITPK1Q13572 414 aa17.93■□□□□ 0.46
SDF4-203ENST00000403997 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
SDF4-203ENST00000403997 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
SDF4-203ENST00000403997 PHF14O94880 888 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 C5P01031 1676 aa17.92■□□□□ 0.46
SDF4-203ENST00000403997 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
SDF4-203ENST00000403997 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
SDF4-203ENST00000403997 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
SDF4-203ENST00000403997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
SDF4-203ENST00000403997 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
SDF4-203ENST00000403997 AMIGO3Q86WK7 504 aa17.9■□□□□ 0.46
SDF4-203ENST00000403997 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
SDF4-203ENST00000403997 C4BP0C0L5 1744 aa17.89■□□□□ 0.46
SDF4-203ENST00000403997 GNPATO15228 680 aa17.89■□□□□ 0.45
SDF4-203ENST00000403997 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
SDF4-203ENST00000403997 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
SDF4-203ENST00000403997 LGR6Q9HBX8 967 aa17.89■□□□□ 0.45
SDF4-203ENST00000403997 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
SDF4-203ENST00000403997 SSFA2P28290 1259 aa17.88■□□□□ 0.45
SDF4-203ENST00000403997 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
SDF4-203ENST00000403997 SLC52A2Q9HAB3 445 aa17.87■□□□□ 0.45
SDF4-203ENST00000403997 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
SDF4-203ENST00000403997 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
SDF4-203ENST00000403997 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
SDF4-203ENST00000403997 RTCBQ9Y3I0 505 aaKnown RBP17.85■□□□□ 0.45
SDF4-203ENST00000403997 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
SDF4-203ENST00000403997 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
SDF4-203ENST00000403997 TRAPPC3LQ5T215 181 aa17.83■□□□□ 0.44
SDF4-203ENST00000403997 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.44
SDF4-203ENST00000403997 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
SDF4-203ENST00000403997 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
SDF4-203ENST00000403997 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
SDF4-203ENST00000403997 GPR162Q16538 588 aa17.82■□□□□ 0.44
SDF4-203ENST00000403997 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
SDF4-203ENST00000403997 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
SDF4-203ENST00000403997 CNTNAP4Q9C0A0 1308 aa17.81■□□□□ 0.44
SDF4-203ENST00000403997 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
SDF4-203ENST00000403997 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
SDF4-203ENST00000403997 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
SDF4-203ENST00000403997 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
SDF4-203ENST00000403997 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
SDF4-203ENST00000403997 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
SDF4-203ENST00000403997 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
SDF4-203ENST00000403997 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
SDF4-203ENST00000403997 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
SDF4-203ENST00000403997 ADRA2BP18089 450 aa17.79■□□□□ 0.44
SDF4-203ENST00000403997 RFC4P35249 363 aa17.79■□□□□ 0.44
SDF4-203ENST00000403997 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
SDF4-203ENST00000403997 FCHSD2O94868 740 aa17.78■□□□□ 0.44
SDF4-203ENST00000403997 TEFQ10587 303 aa17.78■□□□□ 0.44
SDF4-203ENST00000403997 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
SDF4-203ENST00000403997 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
SDF4-203ENST00000403997 ZNF831Q5JPB2 1677 aa17.77■□□□□ 0.44
SDF4-203ENST00000403997 MRC1P22897 1456 aa17.76■□□□□ 0.43
SDF4-203ENST00000403997 MMP10P09238 476 aa17.76■□□□□ 0.43
SDF4-203ENST00000403997 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
SDF4-203ENST00000403997 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
SDF4-203ENST00000403997 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
SDF4-203ENST00000403997 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
SDF4-203ENST00000403997 MYH14Q7Z406 1995 aaKnown RBP17.74■□□□□ 0.43
SDF4-203ENST00000403997 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
SDF4-203ENST00000403997 GYS1P13807 737 aa17.74■□□□□ 0.43
SDF4-203ENST00000403997 CCDC87Q9NVE4 849 aa17.74■□□□□ 0.43
SDF4-203ENST00000403997 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
SDF4-203ENST00000403997 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
SDF4-203ENST00000403997 RTF1Q92541 710 aaKnown RBP17.73■□□□□ 0.43
SDF4-203ENST00000403997 ADAMTS7Q9UKP4 1686 aa17.72■□□□□ 0.43
SDF4-203ENST00000403997 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
SDF4-203ENST00000403997 VIRMAQ69YN4 1812 aaKnown RBP17.71■□□□□ 0.43
SDF4-203ENST00000403997 NEFMP07197 916 aa17.71■□□□□ 0.43
SDF4-203ENST00000403997 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
SDF4-203ENST00000403997 ZNF784Q8NCA9 323 aaPredicted RBP17.71■□□□□ 0.43
SDF4-203ENST00000403997 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
SDF4-203ENST00000403997 UTRNP46939 3433 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 STARD3NLO95772 234 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 C1QTNF8P60827 252 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 RALBP1Q15311 655 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
SDF4-203ENST00000403997 PARP3Q9Y6F1 533 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
SDF4-203ENST00000403997 TJP1Q07157 1748 aa17.69■□□□□ 0.42
SDF4-203ENST00000403997 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
SDF4-203ENST00000403997 ZPR1O75312 459 aa17.69■□□□□ 0.42
SDF4-203ENST00000403997 MCM10Q7L590 875 aa17.69■□□□□ 0.42
SDF4-203ENST00000403997 SOS1Q07889 1333 aaPredicted RBP17.69■□□□□ 0.42
SDF4-203ENST00000403997 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
SDF4-203ENST00000403997 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
SDF4-203ENST00000403997 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
SDF4-203ENST00000403997 FKBP8Q14318 412 aa17.68■□□□□ 0.42
SDF4-203ENST00000403997 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
SDF4-203ENST00000403997 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
SDF4-203ENST00000403997 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
SDF4-203ENST00000403997 ZBTB1Q9Y2K1 713 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms