RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.37
ATG3-202ENST00000402314 GOLGA6L22H0YM25 854 aa17.33■□□□□ 0.37
ATG3-202ENST00000402314 TBX22Q9Y458 520 aa17.33■□□□□ 0.37
ATG3-202ENST00000402314 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.36
ATG3-202ENST00000402314 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
ATG3-202ENST00000402314 FLT4P35916 1363 aa17.33■□□□□ 0.36
ATG3-202ENST00000402314 TTC22Q5TAA0 569 aa17.32■□□□□ 0.36
ATG3-202ENST00000402314 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
ATG3-202ENST00000402314 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
ATG3-202ENST00000402314 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 SDSP20132 328 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
ATG3-202ENST00000402314 RGPD8O14715 1765 aaPredicted RBP17.31■□□□□ 0.36
ATG3-202ENST00000402314 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
ATG3-202ENST00000402314 OFD1O75665 1012 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 UQCRHP07919 91 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 TSC1Q92574 1164 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 KIAA0232Q92628 1395 aa17.31■□□□□ 0.36
ATG3-202ENST00000402314 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
ATG3-202ENST00000402314 HOXC9P31274 260 aa17.3■□□□□ 0.36
ATG3-202ENST00000402314 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
ATG3-202ENST00000402314 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
ATG3-202ENST00000402314 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
ATG3-202ENST00000402314 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
ATG3-202ENST00000402314 THEMISQ8N1K5 641 aaPredicted RBP17.3■□□□□ 0.36
ATG3-202ENST00000402314 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
ATG3-202ENST00000402314 SNX21Q969T3 373 aa17.29■□□□□ 0.36
ATG3-202ENST00000402314 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
ATG3-202ENST00000402314 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
ATG3-202ENST00000402314 PTPRCP08575 1304 aa17.29■□□□□ 0.36
ATG3-202ENST00000402314 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
ATG3-202ENST00000402314 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
ATG3-202ENST00000402314 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.36
ATG3-202ENST00000402314 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
ATG3-202ENST00000402314 STK31Q9BXU1 1019 aa17.27■□□□□ 0.36
ATG3-202ENST00000402314 ISY1Q9ULR0 285 aaKnown RBP17.27■□□□□ 0.36
ATG3-202ENST00000402314 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.35
ATG3-202ENST00000402314 FLIIQ13045 1269 aa17.27■□□□□ 0.35
ATG3-202ENST00000402314 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.35
ATG3-202ENST00000402314 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
ATG3-202ENST00000402314 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
ATG3-202ENST00000402314 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
ATG3-202ENST00000402314 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
ATG3-202ENST00000402314 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
ATG3-202ENST00000402314 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
ATG3-202ENST00000402314 KDRP35968 1356 aa17.26■□□□□ 0.35
ATG3-202ENST00000402314 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
ATG3-202ENST00000402314 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
ATG3-202ENST00000402314 SETD1BQ9UPS6 1966 aaKnown RBP17.25■□□□□ 0.35
ATG3-202ENST00000402314 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 SYCE3A1L190 88 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
ATG3-202ENST00000402314 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
ATG3-202ENST00000402314 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
ATG3-202ENST00000402314 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
ATG3-202ENST00000402314 ANXA1P04083 346 aa17.24■□□□□ 0.35
ATG3-202ENST00000402314 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
ATG3-202ENST00000402314 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
ATG3-202ENST00000402314 LGR6Q9HBX8 967 aa17.23■□□□□ 0.35
ATG3-202ENST00000402314 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
ATG3-202ENST00000402314 KCNQ3O43525 872 aa17.22■□□□□ 0.35
ATG3-202ENST00000402314 GNAI2P04899 355 aa17.22■□□□□ 0.35
ATG3-202ENST00000402314 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
ATG3-202ENST00000402314 ZNF830Q96NB3 372 aaPredicted RBP17.22■□□□□ 0.35
ATG3-202ENST00000402314 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
ATG3-202ENST00000402314 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
ATG3-202ENST00000402314 PTMAP06454 111 aaKnown RBP17.22■□□□□ 0.35
ATG3-202ENST00000402314 PDE1AP54750 535 aa17.22■□□□□ 0.35
ATG3-202ENST00000402314 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
ATG3-202ENST00000402314 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 ARHGAP23Q9P227 1491 aa17.21■□□□□ 0.35
ATG3-202ENST00000402314 HMMRO75330 724 aa17.21■□□□□ 0.34
ATG3-202ENST00000402314 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.34
ATG3-202ENST00000402314 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.34
ATG3-202ENST00000402314 GPT2Q8TD30 523 aa17.21■□□□□ 0.34
ATG3-202ENST00000402314 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
ATG3-202ENST00000402314 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
ATG3-202ENST00000402314 C17orf53Q8N3J3 647 aaPredicted RBP17.19■□□□□ 0.34
ATG3-202ENST00000402314 SLIT1O75093 1534 aa17.19■□□□□ 0.34
ATG3-202ENST00000402314 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 TMEM63CQ9P1W3 806 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
ATG3-202ENST00000402314 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
ATG3-202ENST00000402314 NOL7Q9UMY1 257 aaKnown RBP17.18■□□□□ 0.34
ATG3-202ENST00000402314 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
ATG3-202ENST00000402314 PSME1Q06323 249 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms