RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
ATG4B-203ENST00000400772 COL24A1Q17RW2 1714 aa21.41■■□□□ 1.02
ATG4B-203ENST00000400772 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
ATG4B-203ENST00000400772 MTHFSDQ2M296 383 aaKnown RBP21.4■■□□□ 1.02
ATG4B-203ENST00000400772 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
ATG4B-203ENST00000400772 MSH5O43196 834 aa21.39■■□□□ 1.01
ATG4B-203ENST00000400772 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
ATG4B-203ENST00000400772 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
ATG4B-203ENST00000400772 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
ATG4B-203ENST00000400772 AK7Q96M32 723 aa21.38■■□□□ 1.01
ATG4B-203ENST00000400772 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
ATG4B-203ENST00000400772 POLD1P28340 1107 aa21.37■■□□□ 1.01
ATG4B-203ENST00000400772 FLAD1Q8NFF5 587 aa21.37■■□□□ 1.01
ATG4B-203ENST00000400772 RBM42Q9BTD8 480 aaKnown RBP21.36■■□□□ 1.01
ATG4B-203ENST00000400772 RNMTO43148 476 aaKnown RBP21.35■■□□□ 1.01
ATG4B-203ENST00000400772 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
ATG4B-203ENST00000400772 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
ATG4B-203ENST00000400772 SCN11AQ9UI33 1791 aa21.34■■□□□ 1.01
ATG4B-203ENST00000400772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.34■■□□□ 1.01
ATG4B-203ENST00000400772 PHF14O94880 888 aa21.34■■□□□ 1.01
ATG4B-203ENST00000400772 MSL1Q68DK7 614 aa21.34■■□□□ 1.01
ATG4B-203ENST00000400772 SSFA2P28290 1259 aa21.33■■□□□ 1.01
ATG4B-203ENST00000400772 CFAP53Q96M91 514 aa21.33■■□□□ 1.01
ATG4B-203ENST00000400772 SLC52A2Q9HAB3 445 aa21.33■■□□□ 1.01
ATG4B-203ENST00000400772 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
ATG4B-203ENST00000400772 GNPATO15228 680 aa21.31■■□□□ 1
ATG4B-203ENST00000400772 PTCD1O75127 700 aaKnown RBP21.31■■□□□ 1
ATG4B-203ENST00000400772 UTRNP46939 3433 aa21.3■■□□□ 1
ATG4B-203ENST00000400772 RSPH6AQ9H0K4 717 aa21.3■■□□□ 1
ATG4B-203ENST00000400772 ADAMTS7Q9UKP4 1686 aa21.29■■□□□ 1
ATG4B-203ENST00000400772 MRC1P22897 1456 aa21.29■■□□□ 1
ATG4B-203ENST00000400772 RC3H1Q5TC82 1133 aaKnown RBP21.29■■□□□ 1
ATG4B-203ENST00000400772 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
ATG4B-203ENST00000400772 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
ATG4B-203ENST00000400772 CNTNAP4Q9C0A0 1308 aa21.28■■□□□ 1
ATG4B-203ENST00000400772 PRKAR2BP31323 418 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 SLC39A6Q13433 755 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 KLHL34Q8N239 644 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 IL17REQ8NFR9 667 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 GAS2L2Q8NHY3 880 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 NUDCQ9Y266 331 aa21.27■■□□□ 1
ATG4B-203ENST00000400772 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
ATG4B-203ENST00000400772 NLGN2Q8NFZ4 835 aa21.26■□□□□ 0.99
ATG4B-203ENST00000400772 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
ATG4B-203ENST00000400772 VIRMAQ69YN4 1812 aaKnown RBP21.25■□□□□ 0.99
ATG4B-203ENST00000400772 MYH14Q7Z406 1995 aaKnown RBP21.25■□□□□ 0.99
ATG4B-203ENST00000400772 RPS6KA4O75676 772 aa21.25■□□□□ 0.99
ATG4B-203ENST00000400772 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-203ENST00000400772 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
ATG4B-203ENST00000400772 TRAPPC3LQ5T215 181 aa21.25■□□□□ 0.99
ATG4B-203ENST00000400772 GNAT3A8MTJ3 354 aa21.24■□□□□ 0.99
ATG4B-203ENST00000400772 ARHGEF1Q92888 912 aaKnown RBP21.24■□□□□ 0.99
ATG4B-203ENST00000400772 FCHSD2O94868 740 aa21.23■□□□□ 0.99
ATG4B-203ENST00000400772 CRKLP46109 303 aaKnown RBP21.23■□□□□ 0.99
ATG4B-203ENST00000400772 TJP1Q07157 1748 aa21.22■□□□□ 0.99
ATG4B-203ENST00000400772 ADRA2BP18089 450 aa21.22■□□□□ 0.99
ATG4B-203ENST00000400772 DNAJC10Q8IXB1 793 aa21.22■□□□□ 0.99
ATG4B-203ENST00000400772 KCPQ6ZWJ8 1503 aa21.21■□□□□ 0.99
ATG4B-203ENST00000400772 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
ATG4B-203ENST00000400772 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
ATG4B-203ENST00000400772 CICQ96RK0 1608 aaPredicted RBP21.21■□□□□ 0.99
ATG4B-203ENST00000400772 YY1P25490 414 aa21.2■□□□□ 0.98
ATG4B-203ENST00000400772 CD2APQ9Y5K6 639 aa21.2■□□□□ 0.98
ATG4B-203ENST00000400772 CEMIPQ8WUJ3 1361 aa21.2■□□□□ 0.98
ATG4B-203ENST00000400772 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
ATG4B-203ENST00000400772 GYS1P13807 737 aa21.18■□□□□ 0.98
ATG4B-203ENST00000400772 RFC4P35249 363 aa21.18■□□□□ 0.98
ATG4B-203ENST00000400772 GPR162Q16538 588 aa21.18■□□□□ 0.98
ATG4B-203ENST00000400772 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
ATG4B-203ENST00000400772 TEFQ10587 303 aa21.17■□□□□ 0.98
ATG4B-203ENST00000400772 MMP10P09238 476 aa21.16■□□□□ 0.98
ATG4B-203ENST00000400772 NLGN1Q8N2Q7 840 aa21.16■□□□□ 0.98
ATG4B-203ENST00000400772 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
ATG4B-203ENST00000400772 SIPA1L3O60292 1781 aaPredicted RBP21.15■□□□□ 0.98
ATG4B-203ENST00000400772 RALBP1Q15311 655 aa21.15■□□□□ 0.98
ATG4B-203ENST00000400772 ZNF790Q6PG37 636 aa21.15■□□□□ 0.98
ATG4B-203ENST00000400772 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
ATG4B-203ENST00000400772 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
ATG4B-203ENST00000400772 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.97
ATG4B-203ENST00000400772 ZNF496Q96IT1 587 aaPredicted RBP21.14■□□□□ 0.97
ATG4B-203ENST00000400772 PLEKHF1Q96S99 279 aa21.14■□□□□ 0.97
ATG4B-203ENST00000400772 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
ATG4B-203ENST00000400772 C4AP0C0L4 1744 aa21.13■□□□□ 0.97
ATG4B-203ENST00000400772 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
ATG4B-203ENST00000400772 KCNQ3O43525 872 aa21.13■□□□□ 0.97
ATG4B-203ENST00000400772 YBX3P16989 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
ATG4B-203ENST00000400772 MCM10Q7L590 875 aa21.13■□□□□ 0.97
ATG4B-203ENST00000400772 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
ATG4B-203ENST00000400772 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
ATG4B-203ENST00000400772 USP42Q9H9J4 1324 aaKnown RBP21.12■□□□□ 0.97
ATG4B-203ENST00000400772 BTBD11A6QL63 1104 aa21.11■□□□□ 0.97
ATG4B-203ENST00000400772 HTATSF1O43719 755 aaKnown RBP21.11■□□□□ 0.97
ATG4B-203ENST00000400772 DCTN1Q14203 1278 aa21.11■□□□□ 0.97
ATG4B-203ENST00000400772 FKBP8Q14318 412 aa21.11■□□□□ 0.97
ATG4B-203ENST00000400772 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
ATG4B-203ENST00000400772 RTF1Q92541 710 aaKnown RBP21.1■□□□□ 0.97
ATG4B-203ENST00000400772 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.97
ATG4B-203ENST00000400772 STARD3NLO95772 234 aa21.07■□□□□ 0.96
ATG4B-203ENST00000400772 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
ATG4B-203ENST00000400772 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms