RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NFATC2IPQ8NCF5 419 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 MYO1BO43795 1136 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 TMEM132AQ24JP5 1023 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 NPATQ14207 1427 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 FLIIQ13045 1269 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 KDM4AO75164 1064 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 LDHCP07864 332 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
GABPA-202ENST00000400075 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 F6X3S4 739 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
GABPA-202ENST00000400075 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
GABPA-202ENST00000400075 TRPC5Q9UL62 973 aaPredicted RBP17.22■□□□□ 0.35
GABPA-202ENST00000400075 GRM1Q13255 1194 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 SHANK2Q9UPX8 1470 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
GABPA-202ENST00000400075 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
GABPA-202ENST00000400075 ANXA1P04083 346 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 MAP3K12Q12852 859 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
GABPA-202ENST00000400075 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 PDE4CQ08493 712 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
GABPA-202ENST00000400075 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
GABPA-202ENST00000400075 HOOK1Q9UJC3 728 aaKnown RBP17.21■□□□□ 0.35
GABPA-202ENST00000400075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.21■□□□□ 0.34
GABPA-202ENST00000400075 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.34
GABPA-202ENST00000400075 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.34
GABPA-202ENST00000400075 PDE4AP27815 886 aa17.2■□□□□ 0.34
GABPA-202ENST00000400075 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
GABPA-202ENST00000400075 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
GABPA-202ENST00000400075 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
GABPA-202ENST00000400075 EXOC6BQ9Y2D4 811 aa17.2■□□□□ 0.34
GABPA-202ENST00000400075 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
GABPA-202ENST00000400075 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
GABPA-202ENST00000400075 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
GABPA-202ENST00000400075 RXRBP28702 533 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
GABPA-202ENST00000400075 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
GABPA-202ENST00000400075 HOXC9P31274 260 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 EYA1Q99502 592 aa17.18■□□□□ 0.34
GABPA-202ENST00000400075 BECN2A8MW95 431 aa17.17■□□□□ 0.34
GABPA-202ENST00000400075 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
GABPA-202ENST00000400075 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
GABPA-202ENST00000400075 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
GABPA-202ENST00000400075 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
GABPA-202ENST00000400075 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
GABPA-202ENST00000400075 FEZ1Q99689 392 aa17.17■□□□□ 0.34
GABPA-202ENST00000400075 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
GABPA-202ENST00000400075 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
GABPA-202ENST00000400075 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
GABPA-202ENST00000400075 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
GABPA-202ENST00000400075 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
GABPA-202ENST00000400075 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
GABPA-202ENST00000400075 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
GABPA-202ENST00000400075 ABCC1P33527 1531 aa17.16■□□□□ 0.34
GABPA-202ENST00000400075 NF2P35240 595 aa17.15■□□□□ 0.34
GABPA-202ENST00000400075 SPTY2D1Q68D10 685 aaPredicted RBP17.15■□□□□ 0.34
GABPA-202ENST00000400075 BAG3O95817 575 aa17.14■□□□□ 0.34
GABPA-202ENST00000400075 CDK5RAP3Q96JB5 506 aa17.14■□□□□ 0.34
GABPA-202ENST00000400075 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.34
GABPA-202ENST00000400075 TSPOAP1O95153 1857 aa17.14■□□□□ 0.34
GABPA-202ENST00000400075 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
GABPA-202ENST00000400075 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
GABPA-202ENST00000400075 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
GABPA-202ENST00000400075 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
GABPA-202ENST00000400075 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
GABPA-202ENST00000400075 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 TPM3P06753 285 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 TPM1P09493 284 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 NAPBQ9H115 298 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
GABPA-202ENST00000400075 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
GABPA-202ENST00000400075 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms