RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 CALCOCO1Q9P1Z2 691 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 HLTFQ14527 1009 aaKnown RBP eCLIP13.5□□□□□ -0.25
HLCS-202ENST00000399120 BMS1Q14692 1282 aaKnown RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 WDHD1O75717 1129 aaPredicted RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 TNNT1P13805 278 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 PHAXQ9H814 394 aaKnown RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 DRC1Q96MC2 740 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 POLR3GO15318 223 aaPredicted RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 KIF20AO95235 890 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
HLCS-202ENST00000399120 SSX2IPQ9Y2D8 614 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
HLCS-202ENST00000399120 CBX1P83916 185 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
HLCS-202ENST00000399120 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
HLCS-202ENST00000399120 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
HLCS-202ENST00000399120 SYCE3A1L190 88 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 YEATS4O95619 227 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 FERMT1Q9BQL6 677 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 CUL5Q93034 780 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
HLCS-202ENST00000399120 SERPINA10Q9UK55 444 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
HLCS-202ENST00000399120 GPATCH11Q8N954 259 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 TMCO5BA8MYB1 307 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
HLCS-202ENST00000399120 CETN1Q12798 172 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 TSR2Q969E8 191 aaKnown RBP13.48□□□□□ -0.25
HLCS-202ENST00000399120 MKNK2Q9HBH9 465 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 BCAR3O75815 825 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 PPP1R14CQ8TAE6 165 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 EHMT1Q9H9B1 1298 aa13.48□□□□□ -0.25
HLCS-202ENST00000399120 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
HLCS-202ENST00000399120 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
HLCS-202ENST00000399120 MCM4P33991 863 aa13.47□□□□□ -0.25
HLCS-202ENST00000399120 TMEM132EQ6IEE7 984 aa13.47□□□□□ -0.25
HLCS-202ENST00000399120 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
HLCS-202ENST00000399120 CCDC196A0A1B0GTZ2 297 aa13.47□□□□□ -0.25
HLCS-202ENST00000399120 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 MAATS1Q7Z4T9 603 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 FBF1Q8TES7 1133 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 LMAN1P49257 510 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
HLCS-202ENST00000399120 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 SREK1Q8WXA9 508 aaKnown RBP13.46□□□□□ -0.25
HLCS-202ENST00000399120 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 IKBKGQ9Y6K9 419 aa13.46□□□□□ -0.25
HLCS-202ENST00000399120 LIG1P18858 919 aa13.46□□□□□ -0.26
HLCS-202ENST00000399120 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.26
HLCS-202ENST00000399120 MINDY4BA8MYZ0 360 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 CCDC96Q2M329 555 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 RAB3IL1Q8TBN0 382 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 PPP2R1AP30153 589 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 CEP112Q8N8E3 955 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 ZWINTO95229 277 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 CYB5RLQ6IPT4 315 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 ACTN2P35609 894 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
HLCS-202ENST00000399120 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
HLCS-202ENST00000399120 PTPRGP23470 1445 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
HLCS-202ENST00000399120 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 ATF7IPQ6VMQ6 1270 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 AKAP2Q9Y2D5 859 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 BAG4O95429 457 aaKnown RBP13.44□□□□□ -0.26
HLCS-202ENST00000399120 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
HLCS-202ENST00000399120 NOP2P46087 812 aaKnown RBP13.44□□□□□ -0.26
HLCS-202ENST00000399120 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
HLCS-202ENST00000399120 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
HLCS-202ENST00000399120 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
HLCS-202ENST00000399120 DDX12PQ92771 950 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms