RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TTC37Q6PGP7 1564 aa17.34■□□□□ 0.37
RPRD1A-202ENST00000399022 FOXO3O43524 673 aa17.33■□□□□ 0.37
RPRD1A-202ENST00000399022 TNNT1P13805 278 aa17.33■□□□□ 0.37
RPRD1A-202ENST00000399022 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.36
RPRD1A-202ENST00000399022 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 BCORL1Q5H9F3 1711 aa17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 CAMK4Q16566 473 aa17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-202ENST00000399022 ANXA1P04083 346 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 FLIIQ13045 1269 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 TERF1P54274 439 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 SETQ01105 290 aaPredicted RBP17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 CALCOCO1Q9P1Z2 691 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 MX1P20591 662 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 KRT85P78386 507 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 TSC1Q92574 1164 aa17.31■□□□□ 0.36
RPRD1A-202ENST00000399022 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
RPRD1A-202ENST00000399022 SMC2O95347 1197 aa17.3■□□□□ 0.36
RPRD1A-202ENST00000399022 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
RPRD1A-202ENST00000399022 APPP05067 770 aa17.3■□□□□ 0.36
RPRD1A-202ENST00000399022 NPATQ14207 1427 aa17.3■□□□□ 0.36
RPRD1A-202ENST00000399022 PTPN14Q15678 1187 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 FERMT3Q86UX7 667 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 PDCP20941 246 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
RPRD1A-202ENST00000399022 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 LARP1BQ659C4 914 aaKnown RBP17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 AACSQ86V21 672 aa17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 NOC3LQ8WTT2 800 aaKnown RBP17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
RPRD1A-202ENST00000399022 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 NAT10Q9H0A0 1025 aaKnown RBP17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 LEKR1Q6ZMV7 388 aa17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
RPRD1A-202ENST00000399022 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.35
RPRD1A-202ENST00000399022 TIGD1Q96MW7 591 aa17.27■□□□□ 0.35
RPRD1A-202ENST00000399022 TNRQ92752 1358 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 POLR3GO15318 223 aaPredicted RBP17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 KIF20AO95235 890 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 AK7Q96M32 723 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 TRMT1Q9NXH9 659 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
RPRD1A-202ENST00000399022 STK3Q13188 491 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 GIMAP6Q6P9H5 292 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 UBXN4Q92575 508 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 PTPRCP08575 1304 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 ABCC1P33527 1531 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 PPP1R9BQ96SB3 815 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 PDILTQ8N807 584 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 ERBB4Q15303 1308 aa17.25■□□□□ 0.35
RPRD1A-202ENST00000399022 SDSP20132 328 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 CPLX1O14810 134 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 KIF18AQ8NI77 898 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
RPRD1A-202ENST00000399022 ZNF445P59923 1031 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
RPRD1A-202ENST00000399022 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms