RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 OSBPL3Q9H4L5 887 aa31.46■■■□□ 2.63
COL13A1-203ENST00000398969 REC8O95072 547 aa31.45■■■□□ 2.63
COL13A1-203ENST00000398969 ABTB2Q8N961 1025 aa31.45■■■□□ 2.62
COL13A1-203ENST00000398969 NUCB2P80303 420 aa31.44■■■□□ 2.62
COL13A1-203ENST00000398969 IGSF1Q8N6C5 1336 aa31.44■■■□□ 2.62
COL13A1-203ENST00000398969 CLCN1P35523 988 aa31.44■■■□□ 2.62
COL13A1-203ENST00000398969 ESCO1Q5FWF5 840 aa31.44■■■□□ 2.62
COL13A1-203ENST00000398969 AK9Q5TCS8 1911 aa31.43■■■□□ 2.62
COL13A1-203ENST00000398969 CYP2E1P05181 493 aaPredicted RBP31.43■■■□□ 2.62
COL13A1-203ENST00000398969 KLHL40Q2TBA0 621 aa31.43■■■□□ 2.62
COL13A1-203ENST00000398969 NUTM2GQ5VZR2 741 aa31.43■■■□□ 2.62
COL13A1-203ENST00000398969 MARF1Q9Y4F3 1742 aaKnown RBP31.42■■■□□ 2.62
COL13A1-203ENST00000398969 USP54Q70EL1 1684 aa31.42■■■□□ 2.62
COL13A1-203ENST00000398969 ERC2O15083 957 aa31.42■■■□□ 2.62
COL13A1-203ENST00000398969 ST18O60284 1047 aa31.42■■■□□ 2.62
COL13A1-203ENST00000398969 PDE1AP54750 535 aa31.42■■■□□ 2.62
COL13A1-203ENST00000398969 EYA1Q99502 592 aa31.42■■■□□ 2.62
COL13A1-203ENST00000398969 GNAI2P04899 355 aa31.4■■■□□ 2.62
COL13A1-203ENST00000398969 PROSER2Q86WR7 435 aaPredicted RBP31.4■■■□□ 2.62
COL13A1-203ENST00000398969 DDX49Q9Y6V7 483 aaKnown RBP31.4■■■□□ 2.62
COL13A1-203ENST00000398969 AMPHP49418 695 aa31.39■■■□□ 2.62
COL13A1-203ENST00000398969 CWC22Q9HCG8 908 aaKnown RBP31.39■■■□□ 2.62
COL13A1-203ENST00000398969 IBTKQ9P2D0 1353 aaPredicted RBP31.39■■■□□ 2.62
COL13A1-203ENST00000398969 LRRC37A3O60309 1634 aa31.39■■■□□ 2.62
COL13A1-203ENST00000398969 STK31Q9BXU1 1019 aa31.38■■■□□ 2.61
COL13A1-203ENST00000398969 PSME1Q06323 249 aa31.36■■■□□ 2.61
COL13A1-203ENST00000398969 PKP1Q13835 747 aa31.36■■■□□ 2.61
COL13A1-203ENST00000398969 EXOC6BQ9Y2D4 811 aa31.36■■■□□ 2.61
COL13A1-203ENST00000398969 FAM208AQ9UK61 1670 aaKnown RBP31.36■■■□□ 2.61
COL13A1-203ENST00000398969 HTATSF1O43719 755 aaKnown RBP31.36■■■□□ 2.61
COL13A1-203ENST00000398969 SALL3Q9BXA9 1300 aa31.35■■■□□ 2.61
COL13A1-203ENST00000398969 MCTP1Q6DN14 999 aa31.35■■■□□ 2.61
COL13A1-203ENST00000398969 FLIIQ13045 1269 aa31.35■■■□□ 2.61
COL13A1-203ENST00000398969 ZGPATQ8N5A5 531 aaKnown RBP31.34■■■□□ 2.61
COL13A1-203ENST00000398969 ORAI2Q96SN7 254 aa31.33■■■□□ 2.61
COL13A1-203ENST00000398969 TUBGCP6Q96RT7 1819 aa31.32■■■□□ 2.6
COL13A1-203ENST00000398969 CCDC30Q5VVM6 783 aa31.32■■■□□ 2.6
COL13A1-203ENST00000398969 ESPNB1AK53 854 aa31.32■■■□□ 2.6
COL13A1-203ENST00000398969 GNAI3P08754 354 aa31.32■■■□□ 2.6
COL13A1-203ENST00000398969 FKBP5Q13451 457 aaPredicted RBP31.31■■■□□ 2.6
COL13A1-203ENST00000398969 LRRCC1Q9C099 1032 aa31.31■■■□□ 2.6
COL13A1-203ENST00000398969 LMBRD1Q9NUN5 540 aa31.31■■■□□ 2.6
COL13A1-203ENST00000398969 HOXC9P31274 260 aa31.31■■■□□ 2.6
COL13A1-203ENST00000398969 GNAT3A8MTJ3 354 aa31.3■■■□□ 2.6
COL13A1-203ENST00000398969 TSHZ3Q63HK5 1081 aa31.3■■■□□ 2.6
COL13A1-203ENST00000398969 C19orf44Q9H6X5 657 aa31.3■■■□□ 2.6
COL13A1-203ENST00000398969 ERBB4Q15303 1308 aa31.3■■■□□ 2.6
COL13A1-203ENST00000398969 TRIM44Q96DX7 344 aaPredicted RBP31.29■■■□□ 2.6
COL13A1-203ENST00000398969 PNMA6EA0A0J9YXQ4 647 aa31.29■■■□□ 2.6
COL13A1-203ENST00000398969 ATP8B2P98198 1209 aa31.29■■■□□ 2.6
COL13A1-203ENST00000398969 MX1P20591 662 aa31.28■■■□□ 2.6
COL13A1-203ENST00000398969 ZDHHC9Q9Y397 364 aa31.28■■■□□ 2.6
COL13A1-203ENST00000398969 ESYT1Q9BSJ8 1104 aa31.27■■■□□ 2.6
COL13A1-203ENST00000398969 NASPP49321 788 aaPredicted RBP31.26■■■□□ 2.59
COL13A1-203ENST00000398969 ZNF445P59923 1031 aa31.26■■■□□ 2.59
COL13A1-203ENST00000398969 NECTIN2Q92692 538 aa31.26■■■□□ 2.59
COL13A1-203ENST00000398969 HSPA2P54652 639 aa31.26■■■□□ 2.59
COL13A1-203ENST00000398969 N4BP2Q86UW6 1770 aaPredicted RBP31.25■■■□□ 2.59
COL13A1-203ENST00000398969 SOS1Q07889 1333 aaPredicted RBP31.25■■■□□ 2.59
COL13A1-203ENST00000398969 NEK4P51957 841 aa31.24■■■□□ 2.59
COL13A1-203ENST00000398969 CCDC173Q0VFZ6 552 aa31.24■■■□□ 2.59
COL13A1-203ENST00000398969 MAP3K5Q99683 1374 aa31.24■■■□□ 2.59
COL13A1-203ENST00000398969 CAVIN1Q6NZI2 390 aaKnown RBP31.23■■■□□ 2.59
COL13A1-203ENST00000398969 IL17REQ8NFR9 667 aa31.23■■■□□ 2.59
COL13A1-203ENST00000398969 PPP1R9BQ96SB3 815 aa31.23■■■□□ 2.59
COL13A1-203ENST00000398969 LRRFIP2Q9Y608 721 aaKnown RBP31.23■■■□□ 2.59
COL13A1-203ENST00000398969 PXDNLA1KZ92 1463 aa31.23■■■□□ 2.59
COL13A1-203ENST00000398969 CACNA1FO60840 1977 aa31.22■■■□□ 2.59
COL13A1-203ENST00000398969 C1orf167Q5SNV9 1468 aa31.22■■■□□ 2.59
COL13A1-203ENST00000398969 NCLP19338 710 aaKnown RBP31.22■■■□□ 2.59
COL13A1-203ENST00000398969 ZSCAN23Q3MJ62 389 aa31.22■■■□□ 2.59
COL13A1-203ENST00000398969 STAP2Q9UGK3 403 aa31.22■■■□□ 2.59
COL13A1-203ENST00000398969 STRCP1A6NGW2 1772 aa31.22■■■□□ 2.59
COL13A1-203ENST00000398969 NFAT5O94916 1531 aa31.21■■■□□ 2.59
COL13A1-203ENST00000398969 CHMLP26374 656 aa31.21■■■□□ 2.59
COL13A1-203ENST00000398969 TMX3Q96JJ7 454 aa31.21■■■□□ 2.59
COL13A1-203ENST00000398969 TMEM94Q12767 1356 aa31.21■■■□□ 2.59
COL13A1-203ENST00000398969 XPCQ01831 940 aaPredicted RBP31.21■■■□□ 2.59
COL13A1-203ENST00000398969 BABAM1Q9NWV8 329 aa31.21■■■□□ 2.59
COL13A1-203ENST00000398969 LTN1O94822 1766 aa31.2■■■□□ 2.59
COL13A1-203ENST00000398969 PRPF40AO75400 957 aaKnown RBP31.19■■■□□ 2.58
COL13A1-203ENST00000398969 MCM2P49736 904 aa31.19■■■□□ 2.58
COL13A1-203ENST00000398969 TAF7Q15545 349 aaPredicted RBP31.19■■■□□ 2.58
COL13A1-203ENST00000398969 KCNH5Q8NCM2 988 aa31.19■■■□□ 2.58
COL13A1-203ENST00000398969 MCCP23508 829 aa31.19■■■□□ 2.58
COL13A1-203ENST00000398969 NAP1L5Q96NT1 182 aaPredicted RBP31.19■■■□□ 2.58
COL13A1-203ENST00000398969 SRCIN1Q9C0H9 1055 aa31.19■■■□□ 2.58
COL13A1-203ENST00000398969 USP44Q9H0E7 712 aa31.19■■■□□ 2.58
COL13A1-203ENST00000398969 TRIM6-TRIM34B2RNG4 842 aa31.18■■■□□ 2.58
COL13A1-203ENST00000398969 RILPL2Q969X0 211 aa31.18■■■□□ 2.58
COL13A1-203ENST00000398969 PALD1Q9ULE6 856 aa31.18■■■□□ 2.58
COL13A1-203ENST00000398969 ANAPC15P60006 121 aa31.17■■■□□ 2.58
COL13A1-203ENST00000398969 IP6K1Q92551 441 aa31.17■■■□□ 2.58
COL13A1-203ENST00000398969 GPT2Q8TD30 523 aa31.17■■■□□ 2.58
COL13A1-203ENST00000398969 ANO2Q9NQ90 1003 aa31.16■■■□□ 2.58
COL13A1-203ENST00000398969 KDM4FA0A1W2PPD8 638 aa31.15■■■□□ 2.58
COL13A1-203ENST00000398969 ATF3P18847 181 aa31.15■■■□□ 2.58
COL13A1-203ENST00000398969 KIF1AQ12756 1690 aa31.15■■■□□ 2.58
COL13A1-203ENST00000398969 ANP32BQ92688 251 aaKnown RBP31.15■■■□□ 2.58
COL13A1-203ENST00000398969 LTV1Q96GA3 475 aaPredicted RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms