RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
TOP3B-202ENST00000398793 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.23
TOP3B-202ENST00000398793 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
TOP3B-202ENST00000398793 CHL1O00533 1208 aa16.51■□□□□ 0.23
TOP3B-202ENST00000398793 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
TOP3B-202ENST00000398793 BACH2Q9BYV9 841 aa16.51■□□□□ 0.23
TOP3B-202ENST00000398793 HSPA1LP34931 641 aa16.51■□□□□ 0.23
TOP3B-202ENST00000398793 SOS2Q07890 1332 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-202ENST00000398793 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
TOP3B-202ENST00000398793 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
TOP3B-202ENST00000398793 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
TOP3B-202ENST00000398793 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
TOP3B-202ENST00000398793 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
TOP3B-202ENST00000398793 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
TOP3B-202ENST00000398793 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
TOP3B-202ENST00000398793 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
TOP3B-202ENST00000398793 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
TOP3B-202ENST00000398793 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-202ENST00000398793 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-202ENST00000398793 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
TOP3B-202ENST00000398793 PXDNQ92626 1479 aa16.48■□□□□ 0.23
TOP3B-202ENST00000398793 AKAP12Q02952 1782 aa16.48■□□□□ 0.23
TOP3B-202ENST00000398793 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-202ENST00000398793 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 USP19O94966 1318 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 IL2RBP14784 551 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 MEIS3Q99687 375 aa16.47■□□□□ 0.23
TOP3B-202ENST00000398793 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
TOP3B-202ENST00000398793 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
TOP3B-202ENST00000398793 PHKG2P15735 406 aa16.46■□□□□ 0.23
TOP3B-202ENST00000398793 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
TOP3B-202ENST00000398793 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
TOP3B-202ENST00000398793 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
TOP3B-202ENST00000398793 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
TOP3B-202ENST00000398793 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
TOP3B-202ENST00000398793 PTF1AQ7RTS3 328 aa16.45■□□□□ 0.22
TOP3B-202ENST00000398793 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
TOP3B-202ENST00000398793 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
TOP3B-202ENST00000398793 A1BGP04217 495 aa16.44■□□□□ 0.22
TOP3B-202ENST00000398793 KCNQ2O43526 872 aa16.44■□□□□ 0.22
TOP3B-202ENST00000398793 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
TOP3B-202ENST00000398793 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
TOP3B-202ENST00000398793 TOPAZ1Q8N9V7 1692 aa16.44■□□□□ 0.22
TOP3B-202ENST00000398793 FLIIQ13045 1269 aa16.43■□□□□ 0.22
TOP3B-202ENST00000398793 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-202ENST00000398793 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-202ENST00000398793 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
TOP3B-202ENST00000398793 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
TOP3B-202ENST00000398793 WDR17Q8IZU2 1322 aa16.43■□□□□ 0.22
TOP3B-202ENST00000398793 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
TOP3B-202ENST00000398793 MEGF6O75095 1541 aa16.42■□□□□ 0.22
TOP3B-202ENST00000398793 EXOC5O00471 708 aa16.42■□□□□ 0.22
TOP3B-202ENST00000398793 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
TOP3B-202ENST00000398793 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
TOP3B-202ENST00000398793 CERKQ8TCT0 537 aa16.42■□□□□ 0.22
TOP3B-202ENST00000398793 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
TOP3B-202ENST00000398793 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
TOP3B-202ENST00000398793 AAMPQ13685 434 aa16.41■□□□□ 0.22
TOP3B-202ENST00000398793 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
TOP3B-202ENST00000398793 KIF16BQ96L93 1317 aa16.4■□□□□ 0.22
TOP3B-202ENST00000398793 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
TOP3B-202ENST00000398793 KDRP35968 1356 aa16.4■□□□□ 0.22
TOP3B-202ENST00000398793 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 PDE3AQ14432 1141 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 CAMTA1Q9Y6Y1 1673 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 MS4A1P11836 297 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 RIC3Q7Z5B4 369 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
TOP3B-202ENST00000398793 IL16Q14005 1332 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 DDB1Q16531 1140 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 C16orf71Q8IYS4 520 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-202ENST00000398793 USP21Q9UK80 565 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 CRB1P82279 1406 aa16.38■□□□□ 0.21
TOP3B-202ENST00000398793 NFAT5O94916 1531 aa16.37■□□□□ 0.21
TOP3B-202ENST00000398793 LTN1O94822 1766 aa16.37■□□□□ 0.21
TOP3B-202ENST00000398793 FGD1P98174 961 aa16.37■□□□□ 0.21
TOP3B-202ENST00000398793 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
TOP3B-202ENST00000398793 GPTP24298 496 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 MAP3K2Q9Y2U5 619 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 SIL1Q9H173 461 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
TOP3B-202ENST00000398793 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-202ENST00000398793 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
TOP3B-202ENST00000398793 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
TOP3B-202ENST00000398793 PIGBQ92521 554 aa16.35■□□□□ 0.21
TOP3B-202ENST00000398793 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-202ENST00000398793 IL1RAPL2Q9NP60 686 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 PDE4CQ08493 712 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
TOP3B-202ENST00000398793 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms