RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CAVIN1Q6NZI2 390 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 ARID3AQ99856 593 aa19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 RPAP2Q8IXW5 612 aaPredicted RBP19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 ZGPATQ8N5A5 531 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 CASC1Q6TDU7 716 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 DIP2AQ14689 1571 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 ACEP12821 1306 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 AMOTL2Q9Y2J4 779 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 RTL1A6NKG5 1358 aa19.51■□□□□ 0.71
CHMP1A-201ENST00000397901 EIF4A2Q14240 407 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-201ENST00000397901 CYP2E1P05181 493 aaPredicted RBP19.5■□□□□ 0.71
CHMP1A-201ENST00000397901 THEMISQ8N1K5 641 aaPredicted RBP19.5■□□□□ 0.71
CHMP1A-201ENST00000397901 GTPBP4Q9BZE4 634 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-201ENST00000397901 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
CHMP1A-201ENST00000397901 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CHMP1A-201ENST00000397901 USP6P35125 1406 aa19.49■□□□□ 0.71
CHMP1A-201ENST00000397901 ST18O60284 1047 aa19.49■□□□□ 0.71
CHMP1A-201ENST00000397901 OVOS2A0A0J9YW53 1432 aa19.49■□□□□ 0.71
CHMP1A-201ENST00000397901 OVOS2Q6IE36 1432 aa19.49■□□□□ 0.71
CHMP1A-201ENST00000397901 NALCNQ8IZF0 1738 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 CHL1O00533 1208 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 KIF20AO95235 890 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 CHAMP1Q96JM3 812 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
CHMP1A-201ENST00000397901 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
CHMP1A-201ENST00000397901 XRN1Q8IZH2 1706 aaKnown RBP19.47■□□□□ 0.71
CHMP1A-201ENST00000397901 NUTM2FA1L443 756 aa19.47■□□□□ 0.71
CHMP1A-201ENST00000397901 PRPF40AO75400 957 aaKnown RBP19.47■□□□□ 0.71
CHMP1A-201ENST00000397901 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 CCDC39Q9UFE4 941 aa19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 SOX12O15370 315 aa19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 REC8O95072 547 aa19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 FOXD4L5Q5VV16 416 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 FOXD4L4Q8WXT5 416 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 BBXQ8WY36 941 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
CHMP1A-201ENST00000397901 CWC22Q9HCG8 908 aaKnown RBP19.45■□□□□ 0.7
CHMP1A-201ENST00000397901 PTPRCP08575 1304 aa19.45■□□□□ 0.7
CHMP1A-201ENST00000397901 F6X3S4 739 aa19.45■□□□□ 0.7
CHMP1A-201ENST00000397901 RBSNQ9H1K0 784 aa19.45■□□□□ 0.7
CHMP1A-201ENST00000397901 ZDHHC9Q9Y397 364 aa19.45■□□□□ 0.7
CHMP1A-201ENST00000397901 ERC2O15083 957 aa19.44■□□□□ 0.7
CHMP1A-201ENST00000397901 TSHZ3Q63HK5 1081 aa19.44■□□□□ 0.7
CHMP1A-201ENST00000397901 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
CHMP1A-201ENST00000397901 USP31Q70CQ4 1352 aa19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 LETM1O95202 739 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 G2E3Q7L622 706 aa19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 GPT2Q8TD30 523 aa19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 RGPD8O14715 1765 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 PEAK1Q9H792 1746 aa19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 CEP170BQ9Y4F5 1589 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-201ENST00000397901 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
CHMP1A-201ENST00000397901 HMMRO75330 724 aa19.42■□□□□ 0.7
CHMP1A-201ENST00000397901 MYRIPQ8NFW9 859 aa19.42■□□□□ 0.7
CHMP1A-201ENST00000397901 RIMS1Q86UR5 1692 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-201ENST00000397901 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-201ENST00000397901 GTF2E1P29083 439 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-201ENST00000397901 PDE1AP54750 535 aa19.41■□□□□ 0.7
CHMP1A-201ENST00000397901 FOXO3O43524 673 aa19.41■□□□□ 0.7
CHMP1A-201ENST00000397901 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
CHMP1A-201ENST00000397901 NEK4P51957 841 aa19.4■□□□□ 0.7
CHMP1A-201ENST00000397901 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.69
CHMP1A-201ENST00000397901 TTC21AQ8NDW8 1320 aa19.39■□□□□ 0.69
CHMP1A-201ENST00000397901 NOL8Q76FK4 1167 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-201ENST00000397901 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
CHMP1A-201ENST00000397901 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-201ENST00000397901 CRB1P82279 1406 aa19.38■□□□□ 0.69
CHMP1A-201ENST00000397901 TMX3Q96JJ7 454 aa19.37■□□□□ 0.69
CHMP1A-201ENST00000397901 PRIMPOLQ96LW4 560 aa19.37■□□□□ 0.69
CHMP1A-201ENST00000397901 TMEM63CQ9P1W3 806 aa19.37■□□□□ 0.69
CHMP1A-201ENST00000397901 SYCE3A1L190 88 aa19.36■□□□□ 0.69
CHMP1A-201ENST00000397901 KIAA2012Q0VF49 1180 aa19.36■□□□□ 0.69
CHMP1A-201ENST00000397901 OSBPL3Q9H4L5 887 aa19.36■□□□□ 0.69
CHMP1A-201ENST00000397901 KCNA6P17658 529 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 GNAI2P04899 355 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 HMGN5P82970 282 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 CBX1P83916 185 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 MTHFSDQ2M296 383 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 PALD1Q9ULE6 856 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 PIK3C2AO00443 1686 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 FMN2Q9NZ56 1722 aa19.35■□□□□ 0.69
CHMP1A-201ENST00000397901 GTF2F1P35269 517 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHMP1A-201ENST00000397901 ESYT1Q9BSJ8 1104 aa19.34■□□□□ 0.69
CHMP1A-201ENST00000397901 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
CHMP1A-201ENST00000397901 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
CHMP1A-201ENST00000397901 TRIM6-TRIM34B2RNG4 842 aa19.33■□□□□ 0.69
CHMP1A-201ENST00000397901 TAF3Q5VWG9 929 aa19.33■□□□□ 0.69
CHMP1A-201ENST00000397901 ZNF710Q8N1W2 664 aa19.33■□□□□ 0.69
CHMP1A-201ENST00000397901 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.69
CHMP1A-201ENST00000397901 NECTIN2Q92692 538 aa19.33■□□□□ 0.69
CHMP1A-201ENST00000397901 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms