RNA–Protein interactions for RNA: ENST00000397779.2

TRNT1-204, Transcript of tRNA nucleotidyl transferase 1, human

TSL 5

Gene TRNT1, Length 374 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRNT1-204	ENST00000397779	MAP2	P11137	1827 aa	Known RBP	11.58	□□□□□ -0.56
TRNT1-204	ENST00000397779	RRS1	Q15050	365 aa	Known RBP	11.58	□□□□□ -0.56
TRNT1-204	ENST00000397779	ITGB4	P16144	1822 aa		11.58	□□□□□ -0.56
TRNT1-204	ENST00000397779	BRCA1	P38398	1863 aa	Known RBP	11.57	□□□□□ -0.56
TRNT1-204	ENST00000397779	COG3	Q96JB2	828 aa		11.57	□□□□□ -0.56
TRNT1-204	ENST00000397779	DCAF5	Q96JK2	942 aa		11.57	□□□□□ -0.56
TRNT1-204	ENST00000397779	CCDC87	Q9NVE4	849 aa		11.57	□□□□□ -0.56
TRNT1-204	ENST00000397779	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.56	□□□□□ -0.56
TRNT1-204	ENST00000397779	ATP6V1A	P38606	617 aa		11.56	□□□□□ -0.56
TRNT1-204	ENST00000397779	TMF1	P82094	1093 aa		11.56	□□□□□ -0.56
TRNT1-204	ENST00000397779	TERF2IP	Q9NYB0	399 aa		11.56	□□□□□ -0.56
TRNT1-204	ENST00000397779	ASAP1	Q9ULH1	1129 aa		11.56	□□□□□ -0.56
TRNT1-204	ENST00000397779	NLGN1	Q8N2Q7	840 aa		11.55	□□□□□ -0.56
TRNT1-204	ENST00000397779	PIM2	Q9P1W9	311 aa		11.55	□□□□□ -0.56
TRNT1-204	ENST00000397779	C4A	P0C0L4	1744 aa		11.55	□□□□□ -0.56
TRNT1-204	ENST00000397779	RTL1	A6NKG5	1358 aa		11.54	□□□□□ -0.56
TRNT1-204	ENST00000397779	ARFGEF1	Q9Y6D6	1849 aa		11.54	□□□□□ -0.56
TRNT1-204	ENST00000397779	GYS1	P13807	737 aa		11.54	□□□□□ -0.56
TRNT1-204	ENST00000397779	TRAPPC3L	Q5T215	181 aa		11.54	□□□□□ -0.56
TRNT1-204	ENST00000397779	ARHGEF1	Q92888	912 aa	Known RBP	11.54	□□□□□ -0.56
TRNT1-204	ENST00000397779	PCNT	O95613	3336 aa		11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	SMG6	Q86US8	1419 aa	Known RBP	11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	FOXN1	O15353	648 aa		11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	RASSF7	Q02833	373 aa		11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	HSP90AB2P	Q58FF8	381 aa		11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	DALRD3	Q5D0E6	543 aa	Known RBP	11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	RTCB	Q9Y3I0	505 aa	Known RBP	11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	PARP3	Q9Y6F1	533 aa		11.53	□□□□□ -0.56
TRNT1-204	ENST00000397779	CHRNA5	P30532	468 aa		11.52	□□□□□ -0.57
TRNT1-204	ENST00000397779	NKX1-1	Q15270	411 aa	Predicted RBP	11.52	□□□□□ -0.57
TRNT1-204	ENST00000397779	FAM161A	Q3B820	660 aa		11.52	□□□□□ -0.57
TRNT1-204	ENST00000397779	ATG3	Q9NT62	314 aa		11.52	□□□□□ -0.57
TRNT1-204	ENST00000397779	MKRN1	Q9UHC7	482 aa	Known RBP	11.52	□□□□□ -0.57
TRNT1-204	ENST00000397779	GLTPD2	A6NH11	291 aa		11.51	□□□□□ -0.57
TRNT1-204	ENST00000397779	VEGFA	P15692	232 aa	Predicted RBP	11.51	□□□□□ -0.57
TRNT1-204	ENST00000397779	TMOD3	Q9NYL9	352 aa		11.51	□□□□□ -0.57
TRNT1-204	ENST00000397779	SBF1	O95248	1867 aa		11.51	□□□□□ -0.57
TRNT1-204	ENST00000397779	SLC4A9	Q96Q91	983 aa		11.5	□□□□□ -0.57
TRNT1-204	ENST00000397779	PCDH10	Q9P2E7	1040 aa		11.5	□□□□□ -0.57
TRNT1-204	ENST00000397779	INSR	P06213	1382 aa		11.5	□□□□□ -0.57
TRNT1-204	ENST00000397779	KDR	P35968	1356 aa		11.5	□□□□□ -0.57
TRNT1-204	ENST00000397779	POTEC	B2RU33	542 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	RFC4	P35249	363 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	DDR1	Q08345	913 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	SIN3A	Q96ST3	1273 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	PCGF6	Q9BYE7	350 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	GGNBP2	Q9H3C7	697 aa		11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	KDM6A	O15550	1401 aa	Predicted RBP	11.49	□□□□□ -0.57
TRNT1-204	ENST00000397779	ADRA2B	P18089	450 aa		11.48	□□□□□ -0.57
TRNT1-204	ENST00000397779	PRDM10	Q9NQV6	1147 aa		11.48	□□□□□ -0.57
TRNT1-204	ENST00000397779	CREBZF	Q9NS37	354 aa		11.48	□□□□□ -0.57
TRNT1-204	ENST00000397779	SRP68	Q9UHB9	627 aa	Known RBP	11.48	□□□□□ -0.57
TRNT1-204	ENST00000397779	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	FYB1	O15117	783 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	RPS6KA4	O75676	772 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	NEUROD1	Q13562	356 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	FKBP8	Q14318	412 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	RBM42	Q9BTD8	480 aa	Known RBP	11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	CARD11	Q9BXL7	1154 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	SPG7	Q9UQ90	795 aa		11.47	□□□□□ -0.57
TRNT1-204	ENST00000397779	FLT4	P35916	1363 aa		11.46	□□□□□ -0.57
TRNT1-204	ENST00000397779	CNTNAP4	Q9C0A0	1308 aa		11.46	□□□□□ -0.57
TRNT1-204	ENST00000397779	LMNB1	P20700	586 aa		11.46	□□□□□ -0.57
TRNT1-204	ENST00000397779	RC3H1	Q5TC82	1133 aa	Known RBP	11.46	□□□□□ -0.57
TRNT1-204	ENST00000397779	PUS7	Q96PZ0	661 aa	Known RBP	11.46	□□□□□ -0.57
TRNT1-204	ENST00000397779	NCAPD2	Q15021	1401 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	POTEI	P0CG38	1075 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	POTEJ	P0CG39	1038 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	PHKG2	P15735	406 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	LBX1	P52954	281 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	ABHD8	Q96I13	439 aa		11.45	□□□□□ -0.58
TRNT1-204	ENST00000397779	CNTNAP1	P78357	1384 aa		11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	COL5A3	P25940	1745 aa	Predicted RBP	11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	TIAM2	Q8IVF5	1701 aa		11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	CLSPN	Q9HAW4	1339 aa		11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	POLRMT	O00411	1230 aa	Known RBP	11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	CTCF	P49711	727 aa	Predicted RBP	11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	IFNL2	Q8IZJ0	200 aa		11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	EMILIN1	Q9Y6C2	1016 aa		11.44	□□□□□ -0.58
TRNT1-204	ENST00000397779	USP42	Q9H9J4	1324 aa	Known RBP	11.43	□□□□□ -0.58
TRNT1-204	ENST00000397779	CHADL	Q6NUI6	762 aa		11.43	□□□□□ -0.58
TRNT1-204	ENST00000397779	AIDA	Q96BJ3	306 aa		11.43	□□□□□ -0.58
TRNT1-204	ENST00000397779	TONSL	Q96HA7	1378 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	NFKBIE	O00221	500 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	TM4SF1	P30408	202 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	VEGFB	P49765	207 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	EYA1	Q99502	592 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	ZNF831	Q5JPB2	1677 aa		11.42	□□□□□ -0.58
TRNT1-204	ENST00000397779	MYH14	Q7Z406	1995 aa	Known RBP	11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	CRKL	P46109	303 aa	Known RBP	11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	TESK2	Q96S53	571 aa		11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	WBP1L	Q9NX94	342 aa		11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	KIF24	Q5T7B8	1368 aa		11.41	□□□□□ -0.58
TRNT1-204	ENST00000397779	PPM1G	O15355	546 aa	Predicted RBP	11.4	□□□□□ -0.58
TRNT1-204	ENST00000397779	HSPA8	P11142	646 aa	Known RBP	11.4	□□□□□ -0.58
TRNT1-204	ENST00000397779	MLLT1	Q03111	559 aa	Predicted RBP	11.4	□□□□□ -0.58
TRNT1-204	ENST00000397779	DPY19L2	Q6NUT2	758 aa		11.4	□□□□□ -0.58
TRNT1-204	ENST00000397779	PASK	Q96RG2	1323 aa		11.39	□□□□□ -0.59
TRNT1-204	ENST00000397779	CCDC85C	A6NKD9	419 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms