RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 KIF4AO95239 1232 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 FGRP09769 529 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMCO1-201ENST00000397537 PRIMPOLQ96LW4 560 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 SEPT3Q9UH03 358 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
SMCO1-201ENST00000397537 K7ELQ4 463 aaPredicted RBP8.86□□□□□ -0.99
SMCO1-201ENST00000397537 FMNL1O95466 1100 aaPredicted RBP8.86□□□□□ -0.99
SMCO1-201ENST00000397537 MCCP23508 829 aa8.86□□□□□ -0.99
SMCO1-201ENST00000397537 GYS2P54840 703 aa8.86□□□□□ -0.99
SMCO1-201ENST00000397537 RNPC3Q96LT9 517 aaKnown RBP8.86□□□□□ -0.99
SMCO1-201ENST00000397537 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
SMCO1-201ENST00000397537 SYNJ2O15056 1496 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 RACK1P63244 317 aaKnown RBP8.85□□□□□ -0.99
SMCO1-201ENST00000397537 DAB2P98082 770 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMCO1-201ENST00000397537 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
SMCO1-201ENST00000397537 MAP9Q49MG5 647 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 IER2Q9BTL4 223 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 VTI1BQ9UEU0 232 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 DISP3Q9P2K9 1392 aa8.85□□□□□ -0.99
SMCO1-201ENST00000397537 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 CFAP99D6REC4 459 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 TREHO43280 583 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 ATMINO43313 823 aaPredicted RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 PPP4CP60510 307 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 NR1H3Q13133 447 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 CBLBQ13191 982 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 ODR4Q5SWX8 454 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 BSDC1Q9NW68 430 aaPredicted RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 COMMD10Q9Y6G5 202 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 MROH2BQ7Z745 1585 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 LDHBP07195 334 aaKnown RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 BDNFP23560 247 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 PLEKHG4Q58EX7 1191 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 C8orf48Q96LL4 319 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 THRAP3Q9Y2W1 955 aaKnown RBP8.84□□□□□ -0.99
SMCO1-201ENST00000397537 PCDHGB7Q9Y5F8 929 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -0.99
SMCO1-201ENST00000397537 POTEB2H3BUK9 544 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 FBXO45P0C2W1 286 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 CLDN10P78369 228 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 KCNH2Q12809 1159 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 SERINC3Q13530 473 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 UBE4AQ14139 1066 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 SULF1Q8IWU6 871 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 OGFOD1Q8N543 542 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 SCYL1Q96KG9 808 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 RBCK1Q9BYM8 510 aa8.83□□□□□ -1
SMCO1-201ENST00000397537 GEMIN8Q9NWZ8 242 aaKnown RBP8.83□□□□□ -1
SMCO1-201ENST00000397537 RCCD1A6NED2 376 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 FDX1P10109 184 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
SMCO1-201ENST00000397537 SLAIN1Q8ND83 568 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 TYW1Q9NV66 732 aaKnown RBP8.82□□□□□ -1
SMCO1-201ENST00000397537 PRKAB1Q9Y478 270 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 SYNJ1O43426 1573 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 ADGRL1O94910 1474 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
SMCO1-201ENST00000397537 CAPN12Q6ZSI9 719 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 IL17RAQ96F46 866 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 TCEAL9Q9UHQ7 104 aa8.82□□□□□ -1
SMCO1-201ENST00000397537 CCER2I3L3R5 266 aa8.81□□□□□ -1
SMCO1-201ENST00000397537 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
SMCO1-201ENST00000397537 DKK1O94907 266 aa8.81□□□□□ -1
SMCO1-201ENST00000397537 GUCA2AQ02747 115 aa8.81□□□□□ -1
SMCO1-201ENST00000397537 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
SMCO1-201ENST00000397537 SENP7Q9BQF6 1050 aa8.81□□□□□ -1
SMCO1-201ENST00000397537 ANP32EQ9BTT0 268 aa8.81□□□□□ -1
SMCO1-201ENST00000397537 KDM6BO15054 1643 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 EXOC5O00471 708 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 TNFRSF10BO14763 440 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 PSMD2Q13200 908 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 SLC39A13Q96H72 371 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 FRMD6Q96NE9 622 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 PPP1R12AO14974 1030 aaPredicted RBP8.8□□□□□ -1
SMCO1-201ENST00000397537 VIL1P09327 827 aaKnown RBP8.8□□□□□ -1
SMCO1-201ENST00000397537 DSC3Q14574 896 aa8.8□□□□□ -1
SMCO1-201ENST00000397537 RAVER1Q8IY67 606 aaKnown RBP8.8□□□□□ -1
SMCO1-201ENST00000397537 TSR2Q969E8 191 aaKnown RBP8.8□□□□□ -1
SMCO1-201ENST00000397537 TOPBP1Q92547 1522 aa8.79□□□□□ -1
SMCO1-201ENST00000397537 MTMR2Q13614 643 aa8.79□□□□□ -1
SMCO1-201ENST00000397537 PDCD7Q8N8D1 485 aaKnown RBP8.79□□□□□ -1
SMCO1-201ENST00000397537 HLA-CQ95604 372 aa8.79□□□□□ -1
SMCO1-201ENST00000397537 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.79□□□□□ -1
SMCO1-201ENST00000397537 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
SMCO1-201ENST00000397537 MAPK8P45983 427 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 AAMPQ13685 434 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 AMOTL1Q8IY63 956 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 ZNF654Q8IZM8 581 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 SETDB2Q96T68 719 aa8.78□□□□□ -1
SMCO1-201ENST00000397537 MKNK1Q9BUB5 465 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms