RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
CHL1-202ENST00000397491 STX6O43752 255 aa17.54■□□□□ 0.4
CHL1-202ENST00000397491 DDX54Q8TDD1 881 aaKnown RBP17.54■□□□□ 0.4
CHL1-202ENST00000397491 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
CHL1-202ENST00000397491 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
CHL1-202ENST00000397491 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
CHL1-202ENST00000397491 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
CHL1-202ENST00000397491 ZSWIM4Q9H7M6 989 aa17.54■□□□□ 0.4
CHL1-202ENST00000397491 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
CHL1-202ENST00000397491 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
CHL1-202ENST00000397491 CTR9Q6PD62 1173 aa17.53■□□□□ 0.4
CHL1-202ENST00000397491 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
CHL1-202ENST00000397491 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
CHL1-202ENST00000397491 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
CHL1-202ENST00000397491 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
CHL1-202ENST00000397491 OGFRQ9NZT2 677 aa17.53■□□□□ 0.4
CHL1-202ENST00000397491 IVLP07476 585 aa17.52■□□□□ 0.4
CHL1-202ENST00000397491 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
CHL1-202ENST00000397491 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
CHL1-202ENST00000397491 KIF20AO95235 890 aa17.52■□□□□ 0.4
CHL1-202ENST00000397491 CCDC43Q96MW1 224 aaKnown RBP17.52■□□□□ 0.39
CHL1-202ENST00000397491 TRIM27P14373 513 aa17.52■□□□□ 0.39
CHL1-202ENST00000397491 STX1AQ16623 288 aa17.52■□□□□ 0.39
CHL1-202ENST00000397491 FEZ1Q99689 392 aa17.52■□□□□ 0.39
CHL1-202ENST00000397491 SKILP12757 684 aa17.51■□□□□ 0.39
CHL1-202ENST00000397491 ANKRD62A6NC57 917 aa17.51■□□□□ 0.39
CHL1-202ENST00000397491 GNG11P61952 73 aa17.51■□□□□ 0.39
CHL1-202ENST00000397491 TAF4BQ92750 862 aa17.51■□□□□ 0.39
CHL1-202ENST00000397491 ARFGAP3Q9NP61 516 aa17.51■□□□□ 0.39
CHL1-202ENST00000397491 MAP2K1Q02750 393 aaPredicted RBP17.5■□□□□ 0.39
CHL1-202ENST00000397491 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
CHL1-202ENST00000397491 ZNF397Q8NF99 534 aaPredicted RBP17.5■□□□□ 0.39
CHL1-202ENST00000397491 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHL1-202ENST00000397491 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
CHL1-202ENST00000397491 CPLX3Q8WVH0 158 aa17.5■□□□□ 0.39
CHL1-202ENST00000397491 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
CHL1-202ENST00000397491 CDKL5O76039 1030 aa17.5■□□□□ 0.39
CHL1-202ENST00000397491 GJB2P29033 226 aa17.5■□□□□ 0.39
CHL1-202ENST00000397491 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
CHL1-202ENST00000397491 SULT6B1Q6IMI4 303 aa17.49■□□□□ 0.39
CHL1-202ENST00000397491 SLU7O95391 586 aaKnown RBP17.49■□□□□ 0.39
CHL1-202ENST00000397491 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHL1-202ENST00000397491 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
CHL1-202ENST00000397491 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
CHL1-202ENST00000397491 SNX21Q969T3 373 aa17.49■□□□□ 0.39
CHL1-202ENST00000397491 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
CHL1-202ENST00000397491 SYCP1Q15431 976 aa17.49■□□□□ 0.39
CHL1-202ENST00000397491 GOLGA6L9A6NEM1 432 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 BIN1O00499 593 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 C10orf67Q8IYJ2 551 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 CCDC12Q8WUD4 166 aaPredicted RBP17.48■□□□□ 0.39
CHL1-202ENST00000397491 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
CHL1-202ENST00000397491 MCM6Q14566 821 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 ALDH1L2Q3SY69 923 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 CAVIN2O95810 425 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 NF2P35240 595 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 SPA17Q15506 151 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 DNAI1Q9UI46 699 aa17.48■□□□□ 0.39
CHL1-202ENST00000397491 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 USP48Q86UV5 1035 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 FAM200AQ8TCP9 573 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 GOLGA6L10A0A0M3HER8 536 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 CAPN2P17655 700 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 KRT18P05783 430 aaKnown RBP17.47■□□□□ 0.39
CHL1-202ENST00000397491 LIG1P18858 919 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 CCDC113Q9H0I3 377 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 ANKRD30BQ9BXX2 1392 aa17.47■□□□□ 0.39
CHL1-202ENST00000397491 GUCY1B3Q02153 619 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 RASSF4Q9H2L5 321 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 CCDC158Q5M9N0 1113 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 NUP133Q8WUM0 1156 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
CHL1-202ENST00000397491 TTC31Q49AM3 519 aaPredicted RBP17.46■□□□□ 0.39
CHL1-202ENST00000397491 ANO6Q4KMQ2 910 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 BCCIPQ9P287 314 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHL1-202ENST00000397491 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 PCDHB15Q9Y5E8 787 aa17.46■□□□□ 0.39
CHL1-202ENST00000397491 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.38
CHL1-202ENST00000397491 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 FCHSD2O94868 740 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
CHL1-202ENST00000397491 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 NAIPQ13075 1403 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 GLRX3O76003 335 aaKnown RBP17.45■□□□□ 0.38
CHL1-202ENST00000397491 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
CHL1-202ENST00000397491 LUZP1Q86V48 1076 aa17.45■□□□□ 0.38
CHL1-202ENST00000397491 SEC24BO95487 1268 aa17.44■□□□□ 0.38
CHL1-202ENST00000397491 GBP2P32456 591 aaPredicted RBP17.44■□□□□ 0.38
CHL1-202ENST00000397491 ZSCAN22P10073 491 aaPredicted RBP17.44■□□□□ 0.38
CHL1-202ENST00000397491 PAFAH1B1P43034 410 aa17.44■□□□□ 0.38
CHL1-202ENST00000397491 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
CHL1-202ENST00000397491 PSME1Q06323 249 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms