RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ANO8Q9HCE9 1232 aaPredicted RBP33.59■■■□□ 2.97
TSPAN4-207ENST00000397411 SLC15A2Q16348 729 aa33.58■■■□□ 2.97
TSPAN4-207ENST00000397411 PLEKHF1Q96S99 279 aa33.58■■■□□ 2.97
TSPAN4-207ENST00000397411 RBM42Q9BTD8 480 aaKnown RBP33.58■■■□□ 2.97
TSPAN4-207ENST00000397411 LOC102724428A0A0B4J2F2 783 aa33.56■■■□□ 2.96
TSPAN4-207ENST00000397411 SIK1P57059 783 aa33.56■■■□□ 2.96
TSPAN4-207ENST00000397411 IL17REQ8NFR9 667 aa33.56■■■□□ 2.96
TSPAN4-207ENST00000397411 ATP6V1AP38606 617 aa33.54■■■□□ 2.96
TSPAN4-207ENST00000397411 ADAMTS8Q9UP79 889 aa33.54■■■□□ 2.96
TSPAN4-207ENST00000397411 HTATSF1O43719 755 aaKnown RBP33.52■■■□□ 2.96
TSPAN4-207ENST00000397411 NFE2L2Q16236 605 aa33.52■■■□□ 2.96
TSPAN4-207ENST00000397411 CCDC146Q8IYE0 955 aa33.52■■■□□ 2.96
TSPAN4-207ENST00000397411 PTCD1O75127 700 aaKnown RBP33.51■■■□□ 2.95
TSPAN4-207ENST00000397411 TFCP2L1Q9NZI6 479 aa33.51■■■□□ 2.95
TSPAN4-207ENST00000397411 MCM10Q7L590 875 aa33.5■■■□□ 2.95
TSPAN4-207ENST00000397411 MRS2Q9HD23 443 aa33.5■■■□□ 2.95
TSPAN4-207ENST00000397411 ZNF827Q17R98 1081 aa33.48■■■□□ 2.95
TSPAN4-207ENST00000397411 CCDC184Q52MB2 194 aa33.48■■■□□ 2.95
TSPAN4-207ENST00000397411 AKT1S1Q96B36 256 aa33.48■■■□□ 2.95
TSPAN4-207ENST00000397411 RUNDC1Q96C34 613 aa33.48■■■□□ 2.95
TSPAN4-207ENST00000397411 SLC39A6Q13433 755 aa33.47■■■□□ 2.95
TSPAN4-207ENST00000397411 DCTN1Q14203 1278 aa33.47■■■□□ 2.95
TSPAN4-207ENST00000397411 ADAMTS7Q9UKP4 1686 aa33.46■■■□□ 2.95
TSPAN4-207ENST00000397411 TTC5Q8N0Z6 440 aa33.46■■■□□ 2.95
TSPAN4-207ENST00000397411 MRC1P22897 1456 aa33.44■■■□□ 2.94
TSPAN4-207ENST00000397411 PAPPAQ13219 1627 aa33.44■■■□□ 2.94
TSPAN4-207ENST00000397411 RIPK4P57078 832 aa33.44■■■□□ 2.94
TSPAN4-207ENST00000397411 AK7Q96M32 723 aa33.44■■■□□ 2.94
TSPAN4-207ENST00000397411 DLG5Q8TDM6 1919 aa33.43■■■□□ 2.94
TSPAN4-207ENST00000397411 C5P01031 1676 aa33.43■■■□□ 2.94
TSPAN4-207ENST00000397411 TAF1LQ8IZX4 1826 aa33.42■■■□□ 2.94
TSPAN4-207ENST00000397411 BTBD11A6QL63 1104 aa33.42■■■□□ 2.94
TSPAN4-207ENST00000397411 ITPK1Q13572 414 aa33.42■■■□□ 2.94
TSPAN4-207ENST00000397411 NEUROD2Q15784 382 aa33.42■■■□□ 2.94
TSPAN4-207ENST00000397411 CEMIPQ8WUJ3 1361 aa33.42■■■□□ 2.94
TSPAN4-207ENST00000397411 MSH5O43196 834 aa33.41■■■□□ 2.94
TSPAN4-207ENST00000397411 TMPOP42166 694 aaKnown RBP33.41■■■□□ 2.94
TSPAN4-207ENST00000397411 LINC00116Q8NCU8 138 aa33.4■■■□□ 2.94
TSPAN4-207ENST00000397411 RRP7AQ9Y3A4 280 aaKnown RBP33.4■■■□□ 2.94
TSPAN4-207ENST00000397411 LMOD3Q0VAK6 560 aa33.39■■■□□ 2.94
TSPAN4-207ENST00000397411 SLC4A9Q96Q91 983 aa33.38■■■□□ 2.93
TSPAN4-207ENST00000397411 TAF7Q15545 349 aaPredicted RBP33.37■■■□□ 2.93
TSPAN4-207ENST00000397411 ZNF790Q6PG37 636 aa33.37■■■□□ 2.93
TSPAN4-207ENST00000397411 PDGFDQ9GZP0 370 aaPredicted RBP33.37■■■□□ 2.93
TSPAN4-207ENST00000397411 ZBTB7AO95365 584 aa33.35■■■□□ 2.93
TSPAN4-207ENST00000397411 FLAD1Q8NFF5 587 aa33.35■■■□□ 2.93
TSPAN4-207ENST00000397411 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
TSPAN4-207ENST00000397411 C4BP0C0L5 1744 aa33.35■■■□□ 2.93
TSPAN4-207ENST00000397411 SPON1Q9HCB6 807 aa33.34■■■□□ 2.93
TSPAN4-207ENST00000397411 SIPA1L3O60292 1781 aaPredicted RBP33.34■■■□□ 2.93
TSPAN4-207ENST00000397411 PNPLA7Q6ZV29 1317 aa33.33■■■□□ 2.93
TSPAN4-207ENST00000397411 GNPATO15228 680 aa33.33■■■□□ 2.93
TSPAN4-207ENST00000397411 THUMPD2Q9BTF0 503 aaKnown RBP33.33■■■□□ 2.93
TSPAN4-207ENST00000397411 PHF14O94880 888 aa33.32■■■□□ 2.92
TSPAN4-207ENST00000397411 FMNL2Q96PY5 1086 aa33.32■■■□□ 2.92
TSPAN4-207ENST00000397411 ZNF831Q5JPB2 1677 aa33.32■■■□□ 2.92
TSPAN4-207ENST00000397411 DNAJC10Q8IXB1 793 aa33.31■■■□□ 2.92
TSPAN4-207ENST00000397411 ATF5Q9Y2D1 282 aaPredicted RBP33.31■■■□□ 2.92
TSPAN4-207ENST00000397411 APAF1O14727 1248 aa33.3■■■□□ 2.92
TSPAN4-207ENST00000397411 RC3H1Q5TC82 1133 aaKnown RBP33.3■■■□□ 2.92
TSPAN4-207ENST00000397411 VSIG10Q8N0Z9 540 aa33.3■■■□□ 2.92
TSPAN4-207ENST00000397411 ZNF496Q96IT1 587 aaPredicted RBP33.3■■■□□ 2.92
TSPAN4-207ENST00000397411 QSER1Q2KHR3 1735 aa33.29■■■□□ 2.92
TSPAN4-207ENST00000397411 KCNQ3O43525 872 aa33.29■■■□□ 2.92
TSPAN4-207ENST00000397411 COL23A1Q86Y22 540 aaPredicted RBP33.29■■■□□ 2.92
TSPAN4-207ENST00000397411 MIS18AQ9NYP9 233 aa33.29■■■□□ 2.92
TSPAN4-207ENST00000397411 CASZ1Q86V15 1759 aa33.29■■■□□ 2.92
TSPAN4-207ENST00000397411 TUBGCP6Q96RT7 1819 aa33.28■■■□□ 2.92
TSPAN4-207ENST00000397411 SLC16A10Q8TF71 515 aa33.28■■■□□ 2.92
TSPAN4-207ENST00000397411 MTFR1LQ9H019 292 aa33.28■■■□□ 2.92
TSPAN4-207ENST00000397411 RTCBQ9Y3I0 505 aaKnown RBP33.28■■■□□ 2.92
TSPAN4-207ENST00000397411 TEX13AQ9BXU3 409 aaPredicted RBP33.27■■■□□ 2.92
TSPAN4-207ENST00000397411 KCPQ6ZWJ8 1503 aa33.27■■■□□ 2.92
TSPAN4-207ENST00000397411 CNTNAP4Q9C0A0 1308 aa33.27■■■□□ 2.92
TSPAN4-207ENST00000397411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.26■■■□□ 2.91
TSPAN4-207ENST00000397411 CRKLP46109 303 aaKnown RBP33.26■■■□□ 2.91
TSPAN4-207ENST00000397411 FAM9BQ8IZU0 186 aa33.26■■■□□ 2.91
TSPAN4-207ENST00000397411 STARD3NLO95772 234 aa33.25■■■□□ 2.91
TSPAN4-207ENST00000397411 SSFA2P28290 1259 aa33.25■■■□□ 2.91
TSPAN4-207ENST00000397411 DIEXFQ68CQ4 756 aaKnown RBP33.25■■■□□ 2.91
TSPAN4-207ENST00000397411 SMIM5Q71RC9 77 aa33.25■■■□□ 2.91
TSPAN4-207ENST00000397411 PPP1R1BQ9UD71 204 aaPredicted RBP33.25■■■□□ 2.91
TSPAN4-207ENST00000397411 HEG1Q9ULI3 1381 aa33.24■■■□□ 2.91
TSPAN4-207ENST00000397411 TRAPPC3LQ5T215 181 aa33.24■■■□□ 2.91
TSPAN4-207ENST00000397411 UBR2Q8IWV8 1755 aa33.24■■■□□ 2.91
TSPAN4-207ENST00000397411 COL5A3P25940 1745 aaPredicted RBP33.23■■■□□ 2.91
TSPAN4-207ENST00000397411 TJP1Q07157 1748 aa33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 RPS6KA4O75676 772 aa33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 CYP19A1P11511 503 aaPredicted RBP33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 CCDC87Q9NVE4 849 aa33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 TRIM35Q9UPQ4 493 aa33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 UBR3Q6ZT12 1888 aa33.22■■■□□ 2.91
TSPAN4-207ENST00000397411 LAS1LQ9Y4W2 734 aaKnown RBP33.21■■■□□ 2.91
TSPAN4-207ENST00000397411 TSPYL4Q9UJ04 414 aa33.2■■■□□ 2.91
TSPAN4-207ENST00000397411 SNRPA1P09661 255 aaKnown RBP33.19■■■□□ 2.9
TSPAN4-207ENST00000397411 AMIGO3Q86WK7 504 aa33.19■■■□□ 2.9
TSPAN4-207ENST00000397411 LRP5O75197 1615 aa33.18■■■□□ 2.9
TSPAN4-207ENST00000397411 INTS5Q6P9B9 1019 aaKnown RBP33.18■■■□□ 2.9
TSPAN4-207ENST00000397411 MYH14Q7Z406 1995 aaKnown RBP33.18■■■□□ 2.9
TSPAN4-207ENST00000397411 ADRA2BP18089 450 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms