RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
GAPDH-203ENST00000396858 RGS12O14924 1447 aa18.3■□□□□ 0.52
GAPDH-203ENST00000396858 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
GAPDH-203ENST00000396858 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
GAPDH-203ENST00000396858 RBM6P78332 1123 aaKnown RBP18.28■□□□□ 0.52
GAPDH-203ENST00000396858 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
GAPDH-203ENST00000396858 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
GAPDH-203ENST00000396858 ITGB4P16144 1822 aa18.28■□□□□ 0.52
GAPDH-203ENST00000396858 BRWD3Q6RI45 1802 aa18.28■□□□□ 0.52
GAPDH-203ENST00000396858 CABP4P57796 275 aa18.27■□□□□ 0.52
GAPDH-203ENST00000396858 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
GAPDH-203ENST00000396858 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-203ENST00000396858 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
GAPDH-203ENST00000396858 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 KCNQ3O43525 872 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 POTEAQ6S8J7 498 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
GAPDH-203ENST00000396858 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
GAPDH-203ENST00000396858 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
GAPDH-203ENST00000396858 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
GAPDH-203ENST00000396858 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
GAPDH-203ENST00000396858 C5P01031 1676 aa18.24■□□□□ 0.51
GAPDH-203ENST00000396858 BCL9O00512 1426 aa18.23■□□□□ 0.51
GAPDH-203ENST00000396858 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
GAPDH-203ENST00000396858 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
GAPDH-203ENST00000396858 TSPYL6Q8N831 410 aa18.23■□□□□ 0.51
GAPDH-203ENST00000396858 RCAN3Q9UKA8 241 aa18.23■□□□□ 0.51
GAPDH-203ENST00000396858 RXRBP28702 533 aa18.22■□□□□ 0.51
GAPDH-203ENST00000396858 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
GAPDH-203ENST00000396858 SYTL4Q96C24 671 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-203ENST00000396858 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
GAPDH-203ENST00000396858 PRIM1P49642 420 aaKnown RBP18.2■□□□□ 0.5
GAPDH-203ENST00000396858 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
GAPDH-203ENST00000396858 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-203ENST00000396858 PIGBQ92521 554 aa18.2■□□□□ 0.5
GAPDH-203ENST00000396858 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
GAPDH-203ENST00000396858 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
GAPDH-203ENST00000396858 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
GAPDH-203ENST00000396858 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
GAPDH-203ENST00000396858 CT47B1P0C2W7 299 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-203ENST00000396858 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
GAPDH-203ENST00000396858 BTAF1O14981 1849 aa18.17■□□□□ 0.5
GAPDH-203ENST00000396858 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
GAPDH-203ENST00000396858 KCNQ2O43526 872 aa18.16■□□□□ 0.5
GAPDH-203ENST00000396858 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
GAPDH-203ENST00000396858 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-203ENST00000396858 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
GAPDH-203ENST00000396858 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
GAPDH-203ENST00000396858 VAMP4O75379 141 aa18.15■□□□□ 0.5
GAPDH-203ENST00000396858 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
GAPDH-203ENST00000396858 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
GAPDH-203ENST00000396858 TJP1Q07157 1748 aa18.15■□□□□ 0.5
GAPDH-203ENST00000396858 PRAMEF22A3QJZ6 481 aa18.14■□□□□ 0.49
GAPDH-203ENST00000396858 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
GAPDH-203ENST00000396858 BCAR3O75815 825 aa18.14■□□□□ 0.49
GAPDH-203ENST00000396858 PTF1AQ7RTS3 328 aa18.14■□□□□ 0.49
GAPDH-203ENST00000396858 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
GAPDH-203ENST00000396858 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
GAPDH-203ENST00000396858 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
GAPDH-203ENST00000396858 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
GAPDH-203ENST00000396858 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
GAPDH-203ENST00000396858 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
GAPDH-203ENST00000396858 PALLDQ8WX93 1383 aa18.13■□□□□ 0.49
GAPDH-203ENST00000396858 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
GAPDH-203ENST00000396858 HOXB7P09629 217 aa18.12■□□□□ 0.49
GAPDH-203ENST00000396858 HDGFL1Q5TGJ6 251 aa18.12■□□□□ 0.49
GAPDH-203ENST00000396858 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
GAPDH-203ENST00000396858 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
GAPDH-203ENST00000396858 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
GAPDH-203ENST00000396858 ILDR2Q71H61 639 aa18.11■□□□□ 0.49
GAPDH-203ENST00000396858 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
GAPDH-203ENST00000396858 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
GAPDH-203ENST00000396858 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
GAPDH-203ENST00000396858 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
GAPDH-203ENST00000396858 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
GAPDH-203ENST00000396858 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
GAPDH-203ENST00000396858 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
GAPDH-203ENST00000396858 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
GAPDH-203ENST00000396858 PLIN1O60240 522 aa18.08■□□□□ 0.48
GAPDH-203ENST00000396858 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.48
GAPDH-203ENST00000396858 MRPL50Q8N5N7 158 aaKnown RBP18.08■□□□□ 0.48
GAPDH-203ENST00000396858 EP400Q96L91 3159 aa18.07■□□□□ 0.48
GAPDH-203ENST00000396858 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
GAPDH-203ENST00000396858 CCDC30Q5VVM6 783 aa18.07■□□□□ 0.48
GAPDH-203ENST00000396858 FRAT1Q92837 279 aaPredicted RBP18.07■□□□□ 0.48
GAPDH-203ENST00000396858 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
GAPDH-203ENST00000396858 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
GAPDH-203ENST00000396858 LY75O60449 1722 aa18.06■□□□□ 0.48
GAPDH-203ENST00000396858 TRIM37O94972 964 aa18.06■□□□□ 0.48
GAPDH-203ENST00000396858 IRX6P78412 446 aaPredicted RBP18.06■□□□□ 0.48
GAPDH-203ENST00000396858 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
GAPDH-203ENST00000396858 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
GAPDH-203ENST00000396858 ANXA1P04083 346 aa18.05■□□□□ 0.48
GAPDH-203ENST00000396858 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
GAPDH-203ENST00000396858 BCL11BQ9C0K0 894 aaPredicted RBP18.05■□□□□ 0.48
GAPDH-203ENST00000396858 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
GAPDH-203ENST00000396858 COL5A3P25940 1745 aaPredicted RBP18.05■□□□□ 0.48
GAPDH-203ENST00000396858 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms