RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
GAPDH-202ENST00000396856 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
GAPDH-202ENST00000396856 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
GAPDH-202ENST00000396856 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
GAPDH-202ENST00000396856 PRELPP51888 382 aa16.46■□□□□ 0.23
GAPDH-202ENST00000396856 HTRA3P83110 453 aa16.46■□□□□ 0.23
GAPDH-202ENST00000396856 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
GAPDH-202ENST00000396856 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
GAPDH-202ENST00000396856 PHKG2P15735 406 aa16.45■□□□□ 0.22
GAPDH-202ENST00000396856 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
GAPDH-202ENST00000396856 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
GAPDH-202ENST00000396856 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
GAPDH-202ENST00000396856 CAPN15O75808 1086 aa16.43■□□□□ 0.22
GAPDH-202ENST00000396856 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
GAPDH-202ENST00000396856 PIGBQ92521 554 aa16.43■□□□□ 0.22
GAPDH-202ENST00000396856 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
GAPDH-202ENST00000396856 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
GAPDH-202ENST00000396856 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-202ENST00000396856 RBM46Q8TBY0 533 aaKnown RBP16.42■□□□□ 0.22
GAPDH-202ENST00000396856 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
GAPDH-202ENST00000396856 ITGB4P16144 1822 aa16.41■□□□□ 0.22
GAPDH-202ENST00000396856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
GAPDH-202ENST00000396856 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
GAPDH-202ENST00000396856 KIAA1551Q9HCM1 1747 aa16.4■□□□□ 0.22
GAPDH-202ENST00000396856 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
GAPDH-202ENST00000396856 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
GAPDH-202ENST00000396856 DCAF5Q96JK2 942 aa16.39■□□□□ 0.21
GAPDH-202ENST00000396856 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
GAPDH-202ENST00000396856 KDRP35968 1356 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 IL13P35225 146 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 SIK1P57059 783 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 AK7Q96M32 723 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
GAPDH-202ENST00000396856 PHF14O94880 888 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 SSFA2P28290 1259 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 TGFB2P61812 414 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 FSTL1Q12841 308 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
GAPDH-202ENST00000396856 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-202ENST00000396856 MTHFSP49914 203 aa16.36■□□□□ 0.21
GAPDH-202ENST00000396856 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
GAPDH-202ENST00000396856 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
GAPDH-202ENST00000396856 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
GAPDH-202ENST00000396856 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
GAPDH-202ENST00000396856 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
GAPDH-202ENST00000396856 KCNA3P22001 575 aa16.34■□□□□ 0.21
GAPDH-202ENST00000396856 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
GAPDH-202ENST00000396856 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
GAPDH-202ENST00000396856 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.21
GAPDH-202ENST00000396856 MMP10P09238 476 aa16.33■□□□□ 0.2
GAPDH-202ENST00000396856 ATP6V1AP38606 617 aa16.33■□□□□ 0.2
GAPDH-202ENST00000396856 CABP4P57796 275 aa16.33■□□□□ 0.2
GAPDH-202ENST00000396856 ARHGAP27Q6ZUM4 889 aa16.33■□□□□ 0.2
GAPDH-202ENST00000396856 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
GAPDH-202ENST00000396856 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
GAPDH-202ENST00000396856 ITPK1Q13572 414 aa16.32■□□□□ 0.2
GAPDH-202ENST00000396856 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
GAPDH-202ENST00000396856 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
GAPDH-202ENST00000396856 GNPATO15228 680 aa16.3■□□□□ 0.2
GAPDH-202ENST00000396856 DPEP1P16444 411 aa16.3■□□□□ 0.2
GAPDH-202ENST00000396856 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
GAPDH-202ENST00000396856 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
GAPDH-202ENST00000396856 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
GAPDH-202ENST00000396856 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
GAPDH-202ENST00000396856 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
GAPDH-202ENST00000396856 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
GAPDH-202ENST00000396856 FCHSD2O94868 740 aa16.27■□□□□ 0.2
GAPDH-202ENST00000396856 SLC34A2O95436 690 aa16.27■□□□□ 0.2
GAPDH-202ENST00000396856 HMOX1P09601 288 aa16.27■□□□□ 0.2
GAPDH-202ENST00000396856 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
GAPDH-202ENST00000396856 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.2
GAPDH-202ENST00000396856 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
GAPDH-202ENST00000396856 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
GAPDH-202ENST00000396856 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
GAPDH-202ENST00000396856 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
GAPDH-202ENST00000396856 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
GAPDH-202ENST00000396856 SLC4A9Q96Q91 983 aa16.26■□□□□ 0.19
GAPDH-202ENST00000396856 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
GAPDH-202ENST00000396856 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
GAPDH-202ENST00000396856 ADRA2BP18089 450 aa16.25■□□□□ 0.19
GAPDH-202ENST00000396856 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
GAPDH-202ENST00000396856 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
GAPDH-202ENST00000396856 GYS1P13807 737 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
GAPDH-202ENST00000396856 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
GAPDH-202ENST00000396856 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
GAPDH-202ENST00000396856 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
GAPDH-202ENST00000396856 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
GAPDH-202ENST00000396856 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
GAPDH-202ENST00000396856 MRC1P22897 1456 aa16.22■□□□□ 0.19
GAPDH-202ENST00000396856 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
GAPDH-202ENST00000396856 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms