RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 AK7Q96M32 723 aa23.35■■□□□ 1.33
TNFSF13-205ENST00000396545 TMOD3Q9NYL9 352 aa23.35■■□□□ 1.33
TNFSF13-205ENST00000396545 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
TNFSF13-205ENST00000396545 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
TNFSF13-205ENST00000396545 LOC102724428A0A0B4J2F2 783 aa23.34■■□□□ 1.33
TNFSF13-205ENST00000396545 SIK1P57059 783 aa23.34■■□□□ 1.33
TNFSF13-205ENST00000396545 ASAP1Q9ULH1 1129 aa23.32■■□□□ 1.32
TNFSF13-205ENST00000396545 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
TNFSF13-205ENST00000396545 YBX3P16989 372 aaKnown RBP eCLIP23.31■■□□□ 1.32
TNFSF13-205ENST00000396545 LINC00116Q8NCU8 138 aa23.31■■□□□ 1.32
TNFSF13-205ENST00000396545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.31■■□□□ 1.32
TNFSF13-205ENST00000396545 CD2APQ9Y5K6 639 aa23.31■■□□□ 1.32
TNFSF13-205ENST00000396545 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFSF13-205ENST00000396545 PHF14O94880 888 aa23.29■■□□□ 1.32
TNFSF13-205ENST00000396545 SSFA2P28290 1259 aa23.29■■□□□ 1.32
TNFSF13-205ENST00000396545 ITPK1Q13572 414 aa23.29■■□□□ 1.32
TNFSF13-205ENST00000396545 SMIM5Q71RC9 77 aa23.29■■□□□ 1.32
TNFSF13-205ENST00000396545 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
TNFSF13-205ENST00000396545 ATG3Q9NT62 314 aa23.28■■□□□ 1.32
TNFSF13-205ENST00000396545 GRIN3BO60391 1043 aa23.27■■□□□ 1.32
TNFSF13-205ENST00000396545 KDRP35968 1356 aa23.27■■□□□ 1.32
TNFSF13-205ENST00000396545 ATP6V1AP38606 617 aa23.26■■□□□ 1.31
TNFSF13-205ENST00000396545 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
TNFSF13-205ENST00000396545 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
TNFSF13-205ENST00000396545 GNPATO15228 680 aa23.25■■□□□ 1.31
TNFSF13-205ENST00000396545 MORC1Q86VD1 984 aa23.24■■□□□ 1.31
TNFSF13-205ENST00000396545 DCAF5Q96JK2 942 aa23.24■■□□□ 1.31
TNFSF13-205ENST00000396545 ZNF831Q5JPB2 1677 aa23.24■■□□□ 1.31
TNFSF13-205ENST00000396545 KDM6AO15550 1401 aaPredicted RBP23.24■■□□□ 1.31
TNFSF13-205ENST00000396545 HSP90AB1P08238 724 aaKnown RBP23.23■■□□□ 1.31
TNFSF13-205ENST00000396545 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
TNFSF13-205ENST00000396545 PNISRQ8TF01 805 aaKnown RBP23.23■■□□□ 1.31
TNFSF13-205ENST00000396545 CNGB1Q14028 1251 aaPredicted RBP23.22■■□□□ 1.31
TNFSF13-205ENST00000396545 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
TNFSF13-205ENST00000396545 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
TNFSF13-205ENST00000396545 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
TNFSF13-205ENST00000396545 SLC4A9Q96Q91 983 aa23.22■■□□□ 1.31
TNFSF13-205ENST00000396545 C1QTNF8P60827 252 aa23.21■■□□□ 1.31
TNFSF13-205ENST00000396545 ZNF530Q6P9A1 599 aaPredicted RBP23.21■■□□□ 1.31
TNFSF13-205ENST00000396545 ZBED9Q6R2W3 1325 aa23.2■■□□□ 1.3
TNFSF13-205ENST00000396545 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
TNFSF13-205ENST00000396545 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
TNFSF13-205ENST00000396545 GIGYF1O75420 1035 aaPredicted RBP23.16■■□□□ 1.3
TNFSF13-205ENST00000396545 IL13P35225 146 aa23.16■■□□□ 1.3
TNFSF13-205ENST00000396545 CABP4P57796 275 aa23.16■■□□□ 1.3
TNFSF13-205ENST00000396545 SULT6B1Q6IMI4 303 aa23.16■■□□□ 1.3
TNFSF13-205ENST00000396545 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
TNFSF13-205ENST00000396545 MTHFSP49914 203 aa23.15■■□□□ 1.3
TNFSF13-205ENST00000396545 RC3H1Q5TC82 1133 aaKnown RBP23.15■■□□□ 1.3
TNFSF13-205ENST00000396545 CNTNAP4Q9C0A0 1308 aa23.15■■□□□ 1.3
TNFSF13-205ENST00000396545 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.3
TNFSF13-205ENST00000396545 MMP10P09238 476 aa23.14■■□□□ 1.29
TNFSF13-205ENST00000396545 ADRA2BP18089 450 aa23.14■■□□□ 1.29
TNFSF13-205ENST00000396545 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
TNFSF13-205ENST00000396545 ATP10DQ9P241 1426 aa23.13■■□□□ 1.29
TNFSF13-205ENST00000396545 SENP3-EIF4A1A0A087X0R7 540 aa23.12■■□□□ 1.29
TNFSF13-205ENST00000396545 ADCY9O60503 1353 aa23.12■■□□□ 1.29
TNFSF13-205ENST00000396545 KIF13BQ9NQT8 1826 aa23.11■■□□□ 1.29
TNFSF13-205ENST00000396545 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
TNFSF13-205ENST00000396545 CEP350Q5VT06 3117 aa23.11■■□□□ 1.29
TNFSF13-205ENST00000396545 MYH14Q7Z406 1995 aaKnown RBP23.11■■□□□ 1.29
TNFSF13-205ENST00000396545 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
TNFSF13-205ENST00000396545 RPS6KA4O75676 772 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 NFATC2IPQ8NCF5 419 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 WWC3Q9ULE0 1092 aa23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
TNFSF13-205ENST00000396545 PXDNLA1KZ92 1463 aa23.09■■□□□ 1.29
TNFSF13-205ENST00000396545 C4AP0C0L4 1744 aa23.09■■□□□ 1.29
TNFSF13-205ENST00000396545 KIAA1551Q9HCM1 1747 aa23.09■■□□□ 1.29
TNFSF13-205ENST00000396545 PTCD1O75127 700 aaKnown RBP23.09■■□□□ 1.29
TNFSF13-205ENST00000396545 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
TNFSF13-205ENST00000396545 TJP1Q07157 1748 aa23.07■■□□□ 1.28
TNFSF13-205ENST00000396545 GYS1P13807 737 aa23.07■■□□□ 1.28
TNFSF13-205ENST00000396545 RFC4P35249 363 aa23.07■■□□□ 1.28
TNFSF13-205ENST00000396545 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
TNFSF13-205ENST00000396545 AKAP4Q5JQC9 854 aa23.06■■□□□ 1.28
TNFSF13-205ENST00000396545 MRC1P22897 1456 aa23.04■■□□□ 1.28
TNFSF13-205ENST00000396545 TGFB2P61812 414 aa23.04■■□□□ 1.28
TNFSF13-205ENST00000396545 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
TNFSF13-205ENST00000396545 N4BP2Q86UW6 1770 aaPredicted RBP23.03■■□□□ 1.28
TNFSF13-205ENST00000396545 GPBP1L1Q9HC44 474 aaPredicted RBP23.02■■□□□ 1.28
TNFSF13-205ENST00000396545 HMOX1P09601 288 aa23.01■■□□□ 1.27
TNFSF13-205ENST00000396545 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
TNFSF13-205ENST00000396545 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
TNFSF13-205ENST00000396545 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
TNFSF13-205ENST00000396545 USP42Q9H9J4 1324 aaKnown RBP23■■□□□ 1.27
TNFSF13-205ENST00000396545 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
TNFSF13-205ENST00000396545 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
TNFSF13-205ENST00000396545 A0A0G2JLW4 131 aa22.99■■□□□ 1.27
TNFSF13-205ENST00000396545 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
TNFSF13-205ENST00000396545 SRP68Q9UHB9 627 aaKnown RBP22.99■■□□□ 1.27
TNFSF13-205ENST00000396545 RNMTO43148 476 aaKnown RBP22.98■■□□□ 1.27
TNFSF13-205ENST00000396545 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
TNFSF13-205ENST00000396545 BRCA1P38398 1863 aaKnown RBP22.98■■□□□ 1.27
TNFSF13-205ENST00000396545 DPEP1P16444 411 aa22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 FKBP8Q14318 412 aa22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms