RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CEP85Q6P2H3 762 aa20.09■□□□□ 0.81
SNX6-202ENST00000396526 RNMTO43148 476 aaKnown RBP20.09■□□□□ 0.81
SNX6-202ENST00000396526 TATP17735 454 aaPredicted RBP20.09■□□□□ 0.81
SNX6-202ENST00000396526 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
SNX6-202ENST00000396526 RGS12O14924 1447 aa20.09■□□□□ 0.81
SNX6-202ENST00000396526 ERBB3P21860 1342 aa20.08■□□□□ 0.81
SNX6-202ENST00000396526 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
SNX6-202ENST00000396526 EIF4A1P60842 406 aaKnown RBP20.08■□□□□ 0.81
SNX6-202ENST00000396526 SPG7Q9UQ90 795 aa20.08■□□□□ 0.8
SNX6-202ENST00000396526 AXIN2Q9Y2T1 843 aa20.07■□□□□ 0.8
SNX6-202ENST00000396526 C22orf23Q9BZE7 217 aa20.07■□□□□ 0.8
SNX6-202ENST00000396526 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
SNX6-202ENST00000396526 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
SNX6-202ENST00000396526 VIRMAQ69YN4 1812 aaKnown RBP20.05■□□□□ 0.8
SNX6-202ENST00000396526 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
SNX6-202ENST00000396526 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
SNX6-202ENST00000396526 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
SNX6-202ENST00000396526 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SNX6-202ENST00000396526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■■■■□ 22.3
SNX6-202ENST00000396526 DDX17Q92841 729 aaKnown RBP20.03■□□□□ 0.8
SNX6-202ENST00000396526 HDAC5Q9UQL6 1122 aa20.03■□□□□ 0.8
SNX6-202ENST00000396526 SPATA31A3Q5VYP0 1347 aa20.03■□□□□ 0.8
SNX6-202ENST00000396526 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
SNX6-202ENST00000396526 TRPM3Q9HCF6 1732 aaPredicted RBP20.03■□□□□ 0.8
SNX6-202ENST00000396526 SRCIN1Q9C0H9 1055 aa20.03■□□□□ 0.8
SNX6-202ENST00000396526 UBTFL1P0CB47 393 aaPredicted RBP20.02■□□□□ 0.8
SNX6-202ENST00000396526 CASC1Q6TDU7 716 aa20.02■□□□□ 0.8
SNX6-202ENST00000396526 CACNA1FO60840 1977 aa20.01■□□□□ 0.79
SNX6-202ENST00000396526 HSP90AB1P08238 724 aaKnown RBP20.01■□□□□ 0.79
SNX6-202ENST00000396526 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
SNX6-202ENST00000396526 CDC45O75419 566 aa20■□□□□ 0.79
SNX6-202ENST00000396526 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
SNX6-202ENST00000396526 APBB1O00213 710 aa20■□□□□ 0.79
SNX6-202ENST00000396526 CABLES1Q8TDN4 633 aa20■□□□□ 0.79
SNX6-202ENST00000396526 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
SNX6-202ENST00000396526 PLEKHM2Q8IWE5 1019 aa19.98■□□□□ 0.79
SNX6-202ENST00000396526 DNAAF4Q8WXU2 420 aa19.98■□□□□ 0.79
SNX6-202ENST00000396526 ATP8B2P98198 1209 aa19.98■□□□□ 0.79
SNX6-202ENST00000396526 SLAIN2Q9P270 581 aa19.98■□□□□ 0.79
SNX6-202ENST00000396526 PHAXQ9H814 394 aaKnown RBP19.98■□□□□ 0.79
SNX6-202ENST00000396526 PLEKHG2Q9H7P9 1386 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 DDX58O95786 925 aaKnown RBP19.97■□□□□ 0.79
SNX6-202ENST00000396526 CHRNA2Q15822 529 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 BRINP3Q76B58 766 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 PRDM11Q9NQV5 511 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 KCNQ3O43525 872 aa19.97■□□□□ 0.79
SNX6-202ENST00000396526 GIGYF1O75420 1035 aaPredicted RBP19.96■□□□□ 0.79
SNX6-202ENST00000396526 HYPKQ9NX55 129 aa19.96■□□□□ 0.79
SNX6-202ENST00000396526 ALS2Q96Q42 1657 aa19.96■□□□□ 0.79
SNX6-202ENST00000396526 TTC22Q5TAA0 569 aa19.95■□□□□ 0.78
SNX6-202ENST00000396526 PI4KAP2A4QPH2 592 aa19.95■□□□□ 0.78
SNX6-202ENST00000396526 PI4KAP1Q8N8J0 262 aa19.95■□□□□ 0.78
SNX6-202ENST00000396526 CPDO75976 1380 aa19.95■□□□□ 0.78
SNX6-202ENST00000396526 LRRCC1Q9C099 1032 aa19.95■□□□□ 0.78
SNX6-202ENST00000396526 LRRFIP2Q9Y608 721 aaKnown RBP19.95■□□□□ 0.78
SNX6-202ENST00000396526 TTC5Q8N0Z6 440 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 USP44Q9H0E7 712 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 LMO7Q8WWI1 1683 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
SNX6-202ENST00000396526 PHKG2P15735 406 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 HSCBQ8IWL3 235 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 SLC52A2Q9HAB3 445 aa19.94■□□□□ 0.78
SNX6-202ENST00000396526 RBM25P49756 843 aaKnown RBP19.92■□□□□ 0.78
SNX6-202ENST00000396526 RGPD2P0DJD1 1756 aa19.92■□□□□ 0.78
SNX6-202ENST00000396526 ABCC6O95255 1503 aa19.92■□□□□ 0.78
SNX6-202ENST00000396526 PXDNQ92626 1479 aa19.92■□□□□ 0.78
SNX6-202ENST00000396526 SMARCA5O60264 1052 aaPredicted RBP19.92■□□□□ 0.78
SNX6-202ENST00000396526 HSP90AB4PQ58FF6 505 aa19.92■□□□□ 0.78
SNX6-202ENST00000396526 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
SNX6-202ENST00000396526 LMTK3Q96Q04 1460 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 C9orf78Q9NZ63 289 aaPredicted RBP19.91■□□□□ 0.78
SNX6-202ENST00000396526 EXOC6BQ9Y2D4 811 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 KSR2Q6VAB6 950 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 TOM1L2Q6ZVM7 507 aa19.91■□□□□ 0.78
SNX6-202ENST00000396526 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
SNX6-202ENST00000396526 DDX21Q9NR30 783 aaKnown RBP eCLIP19.91■□□□□ 0.78
SNX6-202ENST00000396526 FAM208AQ9UK61 1670 aaKnown RBP19.91■□□□□ 0.78
SNX6-202ENST00000396526 STRCP1A6NGW2 1772 aa19.9■□□□□ 0.78
SNX6-202ENST00000396526 RAB11FIP3O75154 756 aa19.9■□□□□ 0.78
SNX6-202ENST00000396526 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
SNX6-202ENST00000396526 TBC1D2Q9BYX2 928 aa19.9■□□□□ 0.78
SNX6-202ENST00000396526 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.78
SNX6-202ENST00000396526 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
SNX6-202ENST00000396526 CABP4P57796 275 aa19.89■□□□□ 0.77
SNX6-202ENST00000396526 BEND3Q5T5X7 828 aa19.89■□□□□ 0.77
SNX6-202ENST00000396526 ANXA1P04083 346 aa19.88■□□□□ 0.77
SNX6-202ENST00000396526 CAMTA1Q9Y6Y1 1673 aa19.88■□□□□ 0.77
SNX6-202ENST00000396526 NEXNQ0ZGT2 675 aa19.88■□□□□ 0.77
SNX6-202ENST00000396526 OSBPL3Q9H4L5 887 aa19.88■□□□□ 0.77
SNX6-202ENST00000396526 GSPT1P15170 499 aaKnown RBP19.87■□□□□ 0.77
SNX6-202ENST00000396526 EVA1CP58658 441 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 MAP3K2Q9Y2U5 619 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 PNMA6EA0A0J9YXQ4 647 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 SURF6O75683 361 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms