RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
TUBB-208ENST00000396389 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
TUBB-208ENST00000396389 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
TUBB-208ENST00000396389 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
TUBB-208ENST00000396389 CYP27B1O15528 508 aa12.92□□□□□ -0.34
TUBB-208ENST00000396389 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
TUBB-208ENST00000396389 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
TUBB-208ENST00000396389 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
TUBB-208ENST00000396389 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
TUBB-208ENST00000396389 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
TUBB-208ENST00000396389 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
TUBB-208ENST00000396389 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
TUBB-208ENST00000396389 IL17REQ8NFR9 667 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 SPATA31A1Q5TZJ5 1347 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 CRB1P82279 1406 aa12.91□□□□□ -0.34
TUBB-208ENST00000396389 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 KDRP35968 1356 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 MCM4P33991 863 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 CLCN1P35523 988 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
TUBB-208ENST00000396389 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
TUBB-208ENST00000396389 DDB1Q16531 1140 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 EXOC5O00471 708 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
TUBB-208ENST00000396389 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
TUBB-208ENST00000396389 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
TUBB-208ENST00000396389 KCNQ3O43525 872 aa12.88□□□□□ -0.35
TUBB-208ENST00000396389 TRAK2O60296 914 aa12.88□□□□□ -0.35
TUBB-208ENST00000396389 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
TUBB-208ENST00000396389 PHKG2P15735 406 aa12.87□□□□□ -0.35
TUBB-208ENST00000396389 TEFQ10587 303 aa12.87□□□□□ -0.35
TUBB-208ENST00000396389 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
TUBB-208ENST00000396389 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
TUBB-208ENST00000396389 COL18A1P39060 1754 aa12.87□□□□□ -0.35
TUBB-208ENST00000396389 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
TUBB-208ENST00000396389 SLIT2O94813 1529 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 UTRNP46939 3433 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 VPS72Q15906 364 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
TUBB-208ENST00000396389 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
TUBB-208ENST00000396389 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
TUBB-208ENST00000396389 KCNQ2O43526 872 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 KCNQ4P56696 695 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 AAMPQ13685 434 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 A0A0U1RQG5 324 aaPredicted RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 COL22A1Q8NFW1 1626 aaPredicted RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
TUBB-208ENST00000396389 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
TUBB-208ENST00000396389 LMO7Q8WWI1 1683 aa12.84□□□□□ -0.35
TUBB-208ENST00000396389 RRP9O43818 475 aaKnown RBP12.84□□□□□ -0.35
TUBB-208ENST00000396389 RLBP1P12271 317 aa12.84□□□□□ -0.35
TUBB-208ENST00000396389 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
TUBB-208ENST00000396389 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
TUBB-208ENST00000396389 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
TUBB-208ENST00000396389 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
TUBB-208ENST00000396389 ESPNB1AK53 854 aa12.84□□□□□ -0.35
TUBB-208ENST00000396389 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
TUBB-208ENST00000396389 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
TUBB-208ENST00000396389 CABP4P57796 275 aa12.83□□□□□ -0.36
TUBB-208ENST00000396389 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
TUBB-208ENST00000396389 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
TUBB-208ENST00000396389 BRD2P25440 801 aaKnown RBP12.83□□□□□ -0.36
TUBB-208ENST00000396389 GAS2L3Q86XJ1 694 aa12.83□□□□□ -0.36
TUBB-208ENST00000396389 COL14A1Q05707 1796 aaKnown RBP12.83□□□□□ -0.36
TUBB-208ENST00000396389 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
TUBB-208ENST00000396389 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 C8orf58Q8NAV2 365 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 LMOD3Q0VAK6 560 aa12.82□□□□□ -0.36
TUBB-208ENST00000396389 E9PSI1 815 aa12.81□□□□□ -0.36
TUBB-208ENST00000396389 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms