RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 HOXC9P31274 260 aa11.51□□□□□ -0.57
NDE1-201ENST00000396354 PKP1Q13835 747 aa11.51□□□□□ -0.57
NDE1-201ENST00000396354 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
NDE1-201ENST00000396354 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
NDE1-201ENST00000396354 GAS2L3Q86XJ1 694 aa11.51□□□□□ -0.57
NDE1-201ENST00000396354 FAM43AQ8N2R8 423 aa11.51□□□□□ -0.57
NDE1-201ENST00000396354 AMPHP49418 695 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
NDE1-201ENST00000396354 LRRC37A3O60309 1634 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 G2E3Q7L622 706 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 NFAT5O94916 1531 aa11.5□□□□□ -0.57
NDE1-201ENST00000396354 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
NDE1-201ENST00000396354 PROSER2Q86WR7 435 aaPredicted RBP11.49□□□□□ -0.57
NDE1-201ENST00000396354 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
NDE1-201ENST00000396354 ZNF335Q9H4Z2 1342 aaPredicted RBP11.49□□□□□ -0.57
NDE1-201ENST00000396354 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
NDE1-201ENST00000396354 MSH6P52701 1360 aa11.49□□□□□ -0.57
NDE1-201ENST00000396354 ARHGAP45Q92619 1136 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 ATP10DQ9P241 1426 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 MAP4K4O95819 1239 aaPredicted RBP11.48□□□□□ -0.57
NDE1-201ENST00000396354 CAVIN1Q6NZI2 390 aaKnown RBP11.48□□□□□ -0.57
NDE1-201ENST00000396354 GBP4Q96PP9 640 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 MEIS3Q99687 375 aa11.48□□□□□ -0.57
NDE1-201ENST00000396354 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
NDE1-201ENST00000396354 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
NDE1-201ENST00000396354 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
NDE1-201ENST00000396354 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
NDE1-201ENST00000396354 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
NDE1-201ENST00000396354 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.57
NDE1-201ENST00000396354 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
NDE1-201ENST00000396354 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
NDE1-201ENST00000396354 IL17REQ8NFR9 667 aa11.46□□□□□ -0.57
NDE1-201ENST00000396354 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
NDE1-201ENST00000396354 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.58
NDE1-201ENST00000396354 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
NDE1-201ENST00000396354 ESCO1Q5FWF5 840 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 KIAA0232Q92628 1395 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 LRRC59Q96AG4 307 aaKnown RBP11.45□□□□□ -0.58
NDE1-201ENST00000396354 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 PRPF40AO75400 957 aaKnown RBP11.45□□□□□ -0.58
NDE1-201ENST00000396354 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
NDE1-201ENST00000396354 CDC45O75419 566 aa11.44□□□□□ -0.58
NDE1-201ENST00000396354 BMP2KLQ5H9B9 411 aa11.44□□□□□ -0.58
NDE1-201ENST00000396354 KIF2CQ99661 725 aa11.44□□□□□ -0.58
NDE1-201ENST00000396354 GOLGA6L22H0YM25 854 aa11.44□□□□□ -0.58
NDE1-201ENST00000396354 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
NDE1-201ENST00000396354 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
NDE1-201ENST00000396354 MRE11P49959 708 aa11.43□□□□□ -0.58
NDE1-201ENST00000396354 UPF3BQ9BZI7 483 aaKnown RBP11.43□□□□□ -0.58
NDE1-201ENST00000396354 AK9Q5TCS8 1911 aa11.43□□□□□ -0.58
NDE1-201ENST00000396354 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
NDE1-201ENST00000396354 RTL1A6NKG5 1358 aa11.43□□□□□ -0.58
NDE1-201ENST00000396354 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
NDE1-201ENST00000396354 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
NDE1-201ENST00000396354 DDX17Q92841 729 aaKnown RBP11.43□□□□□ -0.58
NDE1-201ENST00000396354 API5Q9BZZ5 524 aaKnown RBP11.43□□□□□ -0.58
NDE1-201ENST00000396354 PXDNQ92626 1479 aa11.42□□□□□ -0.58
NDE1-201ENST00000396354 SDSP20132 328 aa11.42□□□□□ -0.58
NDE1-201ENST00000396354 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
NDE1-201ENST00000396354 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
NDE1-201ENST00000396354 LGR6Q9HBX8 967 aa11.42□□□□□ -0.58
NDE1-201ENST00000396354 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
NDE1-201ENST00000396354 NEK4P51957 841 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
NDE1-201ENST00000396354 ANO2Q9NQ90 1003 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 ESPNB1AK53 854 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 KCNQ3O43525 872 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
NDE1-201ENST00000396354 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
NDE1-201ENST00000396354 CEP85Q6P2H3 762 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 RTF1Q92541 710 aaKnown RBP11.41□□□□□ -0.58
NDE1-201ENST00000396354 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
NDE1-201ENST00000396354 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
NDE1-201ENST00000396354 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
NDE1-201ENST00000396354 BAG4O95429 457 aaKnown RBP11.4□□□□□ -0.58
NDE1-201ENST00000396354 ANXA1P04083 346 aa11.4□□□□□ -0.58
NDE1-201ENST00000396354 PSME1Q06323 249 aa11.4□□□□□ -0.58
NDE1-201ENST00000396354 IP6K1Q92551 441 aa11.4□□□□□ -0.58
NDE1-201ENST00000396354 MED1Q15648 1581 aaPredicted RBP11.4□□□□□ -0.59
NDE1-201ENST00000396354 RBM10P98175 930 aaKnown RBP11.39□□□□□ -0.59
NDE1-201ENST00000396354 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 DCTPP1Q9H773 170 aa11.39□□□□□ -0.59
NDE1-201ENST00000396354 PHRF1Q9P1Y6 1649 aaKnown RBP11.38□□□□□ -0.59
NDE1-201ENST00000396354 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
NDE1-201ENST00000396354 XIRP1Q702N8 1843 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms