RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
DDX39B-202ENST00000396172 RGS12O14924 1447 aa12.84□□□□□ -0.35
DDX39B-202ENST00000396172 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
DDX39B-202ENST00000396172 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
DDX39B-202ENST00000396172 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.35
DDX39B-202ENST00000396172 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.35
DDX39B-202ENST00000396172 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.35
DDX39B-202ENST00000396172 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.36
DDX39B-202ENST00000396172 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
DDX39B-202ENST00000396172 SLFN5Q08AF3 891 aa12.83□□□□□ -0.36
DDX39B-202ENST00000396172 CABP4P57796 275 aa12.82□□□□□ -0.36
DDX39B-202ENST00000396172 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-202ENST00000396172 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
DDX39B-202ENST00000396172 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
DDX39B-202ENST00000396172 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
DDX39B-202ENST00000396172 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-202ENST00000396172 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
DDX39B-202ENST00000396172 LY75O60449 1722 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 C5P01031 1676 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
DDX39B-202ENST00000396172 POTEAQ6S8J7 498 aa12.8□□□□□ -0.36
DDX39B-202ENST00000396172 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
DDX39B-202ENST00000396172 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
DDX39B-202ENST00000396172 CHL1O00533 1208 aa12.8□□□□□ -0.36
DDX39B-202ENST00000396172 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
DDX39B-202ENST00000396172 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-202ENST00000396172 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
DDX39B-202ENST00000396172 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-202ENST00000396172 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
DDX39B-202ENST00000396172 TTC5Q8N0Z6 440 aa12.79□□□□□ -0.36
DDX39B-202ENST00000396172 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
DDX39B-202ENST00000396172 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
DDX39B-202ENST00000396172 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
DDX39B-202ENST00000396172 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
DDX39B-202ENST00000396172 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
DDX39B-202ENST00000396172 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.36
DDX39B-202ENST00000396172 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
DDX39B-202ENST00000396172 SYTL4Q96C24 671 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-202ENST00000396172 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-202ENST00000396172 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-202ENST00000396172 TJP1Q07157 1748 aa12.77□□□□□ -0.37
DDX39B-202ENST00000396172 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
DDX39B-202ENST00000396172 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
DDX39B-202ENST00000396172 HOXB7P09629 217 aa12.75□□□□□ -0.37
DDX39B-202ENST00000396172 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
DDX39B-202ENST00000396172 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-202ENST00000396172 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
DDX39B-202ENST00000396172 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
DDX39B-202ENST00000396172 PIGBQ92521 554 aa12.74□□□□□ -0.37
DDX39B-202ENST00000396172 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
DDX39B-202ENST00000396172 EIF4A1P60842 406 aaKnown RBP12.73□□□□□ -0.37
DDX39B-202ENST00000396172 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
DDX39B-202ENST00000396172 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
DDX39B-202ENST00000396172 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
DDX39B-202ENST00000396172 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-202ENST00000396172 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
DDX39B-202ENST00000396172 RREB1Q92766 1687 aa12.72□□□□□ -0.37
DDX39B-202ENST00000396172 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
DDX39B-202ENST00000396172 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
DDX39B-202ENST00000396172 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
DDX39B-202ENST00000396172 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
DDX39B-202ENST00000396172 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
DDX39B-202ENST00000396172 FAM182BQ5T319 152 aa12.71□□□□□ -0.38
DDX39B-202ENST00000396172 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-202ENST00000396172 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
DDX39B-202ENST00000396172 SNRPA1P09661 255 aaKnown RBP12.7□□□□□ -0.38
DDX39B-202ENST00000396172 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-202ENST00000396172 KCNQ2O43526 872 aa12.69□□□□□ -0.38
DDX39B-202ENST00000396172 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
DDX39B-202ENST00000396172 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
DDX39B-202ENST00000396172 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
DDX39B-202ENST00000396172 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
DDX39B-202ENST00000396172 KCNQ3O43525 872 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-202ENST00000396172 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 VAMP4O75379 141 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 HDGFL1Q5TGJ6 251 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
DDX39B-202ENST00000396172 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
DDX39B-202ENST00000396172 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
DDX39B-202ENST00000396172 KIF16BQ96L93 1317 aa12.67□□□□□ -0.38
DDX39B-202ENST00000396172 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
DDX39B-202ENST00000396172 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
DDX39B-202ENST00000396172 EP400Q96L91 3159 aa12.67□□□□□ -0.38
DDX39B-202ENST00000396172 TRIM37O94972 964 aa12.67□□□□□ -0.38
DDX39B-202ENST00000396172 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
DDX39B-202ENST00000396172 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-202ENST00000396172 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
DDX39B-202ENST00000396172 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-202ENST00000396172 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
DDX39B-202ENST00000396172 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
DDX39B-202ENST00000396172 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
DDX39B-202ENST00000396172 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 STARD3NLO95772 234 aa12.65□□□□□ -0.38
DDX39B-202ENST00000396172 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms