RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 EXOC5O00471 708 aa26.29■■□□□ 1.8
VCPKMT-202ENST00000395860 BARGINQ6ZT62 677 aa26.29■■□□□ 1.8
VCPKMT-202ENST00000395860 MRC1P22897 1456 aa26.29■■□□□ 1.8
VCPKMT-202ENST00000395860 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
VCPKMT-202ENST00000395860 SLC52A2Q9HAB3 445 aa26.28■■□□□ 1.8
VCPKMT-202ENST00000395860 NKX1-1Q15270 411 aaPredicted RBP26.28■■□□□ 1.8
VCPKMT-202ENST00000395860 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
VCPKMT-202ENST00000395860 TNS2Q63HR2 1409 aa26.27■■□□□ 1.8
VCPKMT-202ENST00000395860 AFF2P51816 1311 aa26.27■■□□□ 1.8
VCPKMT-202ENST00000395860 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
VCPKMT-202ENST00000395860 ALDH1L2Q3SY69 923 aa26.26■■□□□ 1.79
VCPKMT-202ENST00000395860 SSH1Q8WYL5 1049 aa26.25■■□□□ 1.79
VCPKMT-202ENST00000395860 CABP4P57796 275 aa26.25■■□□□ 1.79
VCPKMT-202ENST00000395860 NFATC2IPQ8NCF5 419 aa26.25■■□□□ 1.79
VCPKMT-202ENST00000395860 CANXP27824 592 aaKnown RBP26.24■■□□□ 1.79
VCPKMT-202ENST00000395860 DDB1Q16531 1140 aa26.24■■□□□ 1.79
VCPKMT-202ENST00000395860 TOGARAM1Q9Y4F4 1720 aa26.24■■□□□ 1.79
VCPKMT-202ENST00000395860 FRAT1Q92837 279 aaPredicted RBP26.23■■□□□ 1.79
VCPKMT-202ENST00000395860 ERVV-2B6SEH9 535 aa26.22■■□□□ 1.79
VCPKMT-202ENST00000395860 KCNQ3O43525 872 aa26.21■■□□□ 1.79
VCPKMT-202ENST00000395860 FAM98CQ17RN3 349 aaKnown RBP26.21■■□□□ 1.79
VCPKMT-202ENST00000395860 EIF4A1P60842 406 aaKnown RBP26.2■■□□□ 1.79
VCPKMT-202ENST00000395860 SOS1Q07889 1333 aaPredicted RBP26.2■■□□□ 1.78
VCPKMT-202ENST00000395860 ITGB4P16144 1822 aa26.2■■□□□ 1.78
VCPKMT-202ENST00000395860 ERICH6BQ5W0A0 696 aa26.19■■□□□ 1.78
VCPKMT-202ENST00000395860 FBXO41Q8TF61 875 aa26.19■■□□□ 1.78
VCPKMT-202ENST00000395860 GLI3P10071 1580 aa26.18■■□□□ 1.78
VCPKMT-202ENST00000395860 KIF16BQ96L93 1317 aa26.18■■□□□ 1.78
VCPKMT-202ENST00000395860 TRPC5Q9UL62 973 aaPredicted RBP26.18■■□□□ 1.78
VCPKMT-202ENST00000395860 ATRNO75882 1429 aa26.17■■□□□ 1.78
VCPKMT-202ENST00000395860 TCERG1O14776 1098 aaKnown RBP26.17■■□□□ 1.78
VCPKMT-202ENST00000395860 BRPF1P55201 1214 aaPredicted RBP26.17■■□□□ 1.78
VCPKMT-202ENST00000395860 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
VCPKMT-202ENST00000395860 SLC39A6Q13433 755 aa26.16■■□□□ 1.78
VCPKMT-202ENST00000395860 C20orf194Q5TEA3 1177 aa26.16■■□□□ 1.78
VCPKMT-202ENST00000395860 MRPL50Q8N5N7 158 aaKnown RBP26.16■■□□□ 1.78
VCPKMT-202ENST00000395860 GJD4Q96KN9 370 aaPredicted RBP26.16■■□□□ 1.78
VCPKMT-202ENST00000395860 ZKSCAN2Q63HK3 967 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 TTC5Q8N0Z6 440 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 DOT1LQ8TEK3 1739 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 THSD7AQ9UPZ6 1657 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 A0A0G2JS52 829 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 MYT1Q01538 1121 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 NOB1Q9ULX3 412 aaKnown RBP26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 PAPPAQ13219 1627 aa26.15■■□□□ 1.78
VCPKMT-202ENST00000395860 CACNA1FO60840 1977 aa26.14■■□□□ 1.78
VCPKMT-202ENST00000395860 KAT6BQ8WYB5 2073 aa26.14■■□□□ 1.78
VCPKMT-202ENST00000395860 HOXB7P09629 217 aa26.13■■□□□ 1.77
VCPKMT-202ENST00000395860 PDE3AQ14432 1141 aa26.13■■□□□ 1.77
VCPKMT-202ENST00000395860 TMOD3Q9NYL9 352 aa26.13■■□□□ 1.77
VCPKMT-202ENST00000395860 IPO8O15397 1037 aaKnown RBP26.12■■□□□ 1.77
VCPKMT-202ENST00000395860 UBR2Q8IWV8 1755 aa26.12■■□□□ 1.77
VCPKMT-202ENST00000395860 CCDC30Q5VVM6 783 aa26.12■■□□□ 1.77
VCPKMT-202ENST00000395860 MARCH10Q8NA82 808 aaPredicted RBP26.12■■□□□ 1.77
VCPKMT-202ENST00000395860 HEG1Q9ULI3 1381 aa26.12■■□□□ 1.77
VCPKMT-202ENST00000395860 CRBNQ96SW2 442 aa26.11■■□□□ 1.77
VCPKMT-202ENST00000395860 QTRT2Q9H974 415 aaKnown RBP26.11■■□□□ 1.77
VCPKMT-202ENST00000395860 EXOC6Q8TAG9 804 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 STK31Q9BXU1 1019 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 CHMP4AQ9BY43 222 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 C5P01031 1676 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 GIGYF1O75420 1035 aaPredicted RBP26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 MS4A1P11836 297 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 HDGFL1Q5TGJ6 251 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 ATF7IPQ6VMQ6 1270 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 NECTIN2Q92692 538 aa26.1■■□□□ 1.77
VCPKMT-202ENST00000395860 SLC4A2P04920 1241 aa26.08■■□□□ 1.77
VCPKMT-202ENST00000395860 PANK1Q8TE04 598 aa26.08■■□□□ 1.77
VCPKMT-202ENST00000395860 FMNL2Q96PY5 1086 aa26.08■■□□□ 1.77
VCPKMT-202ENST00000395860 TNNQ9UQP3 1299 aa26.08■■□□□ 1.77
VCPKMT-202ENST00000395860 TRIM27P14373 513 aa26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 EIF2S2P20042 333 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 FTSJ3Q8IY81 847 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 ZNF496Q96IT1 587 aaPredicted RBP26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 DZIP1LQ8IYY4 767 aaKnown RBP26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 ARHGAP45Q92619 1136 aa26.07■■□□□ 1.76
VCPKMT-202ENST00000395860 PIGBQ92521 554 aa26.06■■□□□ 1.76
VCPKMT-202ENST00000395860 SYTL4Q96C24 671 aaPredicted RBP26.06■■□□□ 1.76
VCPKMT-202ENST00000395860 LAMB4A4D0S4 1761 aa26.05■■□□□ 1.76
VCPKMT-202ENST00000395860 BCL9O00512 1426 aa26.05■■□□□ 1.76
VCPKMT-202ENST00000395860 PPP4R2Q9NY27 417 aa26.05■■□□□ 1.76
VCPKMT-202ENST00000395860 KCPQ6ZWJ8 1503 aa26.04■■□□□ 1.76
VCPKMT-202ENST00000395860 PRAMEF22A3QJZ6 481 aa26.04■■□□□ 1.76
VCPKMT-202ENST00000395860 ZNF772Q68DY9 489 aaPredicted RBP26.04■■□□□ 1.76
VCPKMT-202ENST00000395860 ONECUT3O60422 494 aaPredicted RBP26.03■■□□□ 1.76
VCPKMT-202ENST00000395860 SNRPA1P09661 255 aaKnown RBP26.03■■□□□ 1.76
VCPKMT-202ENST00000395860 RLBP1P12271 317 aa26.03■■□□□ 1.76
VCPKMT-202ENST00000395860 PRIM1P49642 420 aaKnown RBP26.03■■□□□ 1.76
VCPKMT-202ENST00000395860 COG6Q9Y2V7 657 aa26.03■■□□□ 1.76
VCPKMT-202ENST00000395860 API5Q9BZZ5 524 aaKnown RBP26.02■■□□□ 1.76
VCPKMT-202ENST00000395860 PTPRCP08575 1304 aa26.02■■□□□ 1.76
VCPKMT-202ENST00000395860 ACSBG1Q96GR2 724 aa26.01■■□□□ 1.75
VCPKMT-202ENST00000395860 SEPT12Q8IYM1 358 aa26■■□□□ 1.75
VCPKMT-202ENST00000395860 CHPF2Q9P2E5 772 aa26■■□□□ 1.75
VCPKMT-202ENST00000395860 ASAP1Q9ULH1 1129 aa26■■□□□ 1.75
VCPKMT-202ENST00000395860 PTCD1O75127 700 aaKnown RBP25.99■■□□□ 1.75
VCPKMT-202ENST00000395860 G2E3Q7L622 706 aa25.99■■□□□ 1.75
VCPKMT-202ENST00000395860 ATG3Q9NT62 314 aa25.99■■□□□ 1.75
VCPKMT-202ENST00000395860 DBF4Q9UBU7 674 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms