RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
CXCL12-206ENST00000395795 YY1P25490 414 aa22.01■■□□□ 1.11
CXCL12-206ENST00000395795 POLD1P28340 1107 aa22.01■■□□□ 1.11
CXCL12-206ENST00000395795 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
CXCL12-206ENST00000395795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22■■□□□ 1.11
CXCL12-206ENST00000395795 FLAD1Q8NFF5 587 aa22■■□□□ 1.11
CXCL12-206ENST00000395795 ATP6V1AP38606 617 aa21.99■■□□□ 1.11
CXCL12-206ENST00000395795 AK7Q96M32 723 aa21.99■■□□□ 1.11
CXCL12-206ENST00000395795 MSH5O43196 834 aa21.98■■□□□ 1.11
CXCL12-206ENST00000395795 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
CXCL12-206ENST00000395795 HMOX1P09601 288 aa21.97■■□□□ 1.11
CXCL12-206ENST00000395795 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
CXCL12-206ENST00000395795 SSFA2P28290 1259 aa21.97■■□□□ 1.11
CXCL12-206ENST00000395795 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
CXCL12-206ENST00000395795 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
CXCL12-206ENST00000395795 PHF14O94880 888 aa21.96■■□□□ 1.11
CXCL12-206ENST00000395795 CABP4P57796 275 aa21.96■■□□□ 1.11
CXCL12-206ENST00000395795 NFATC2IPQ8NCF5 419 aa21.96■■□□□ 1.11
CXCL12-206ENST00000395795 MRC1P22897 1456 aa21.96■■□□□ 1.11
CXCL12-206ENST00000395795 DIAPH1O60610 1272 aaKnown RBP21.95■■□□□ 1.1
CXCL12-206ENST00000395795 LGR6Q9HBX8 967 aa21.95■■□□□ 1.1
CXCL12-206ENST00000395795 MYH14Q7Z406 1995 aaKnown RBP21.94■■□□□ 1.1
CXCL12-206ENST00000395795 DCAF8L1A6NGE4 600 aa21.94■■□□□ 1.1
CXCL12-206ENST00000395795 GNPATO15228 680 aa21.94■■□□□ 1.1
CXCL12-206ENST00000395795 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
CXCL12-206ENST00000395795 AKAP4Q5JQC9 854 aa21.94■■□□□ 1.1
CXCL12-206ENST00000395795 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
CXCL12-206ENST00000395795 CICQ96RK0 1608 aaPredicted RBP21.93■■□□□ 1.1
CXCL12-206ENST00000395795 RC3H1Q5TC82 1133 aaKnown RBP21.92■■□□□ 1.1
CXCL12-206ENST00000395795 KLHL34Q8N239 644 aa21.92■■□□□ 1.1
CXCL12-206ENST00000395795 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
CXCL12-206ENST00000395795 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
CXCL12-206ENST00000395795 TJP1Q07157 1748 aa21.91■■□□□ 1.1
CXCL12-206ENST00000395795 RNMTO43148 476 aaKnown RBP21.9■■□□□ 1.1
CXCL12-206ENST00000395795 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
CXCL12-206ENST00000395795 CNGB1Q14028 1251 aaPredicted RBP21.9■■□□□ 1.1
CXCL12-206ENST00000395795 SLC52A2Q9HAB3 445 aa21.9■■□□□ 1.1
CXCL12-206ENST00000395795 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
CXCL12-206ENST00000395795 CD2APQ9Y5K6 639 aa21.89■■□□□ 1.09
CXCL12-206ENST00000395795 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
CXCL12-206ENST00000395795 RPS6KA4O75676 772 aa21.87■■□□□ 1.09
CXCL12-206ENST00000395795 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
CXCL12-206ENST00000395795 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
CXCL12-206ENST00000395795 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
CXCL12-206ENST00000395795 CHD4Q14839 1912 aa21.86■■□□□ 1.09
CXCL12-206ENST00000395795 GPR162Q16538 588 aa21.86■■□□□ 1.09
CXCL12-206ENST00000395795 INTS5Q6P9B9 1019 aaKnown RBP21.85■■□□□ 1.09
CXCL12-206ENST00000395795 ZNF784Q8NCA9 323 aaPredicted RBP21.85■■□□□ 1.09
CXCL12-206ENST00000395795 RTCBQ9Y3I0 505 aaKnown RBP21.85■■□□□ 1.09
CXCL12-206ENST00000395795 C4AP0C0L4 1744 aa21.84■■□□□ 1.09
CXCL12-206ENST00000395795 PPP2R1AP30153 589 aa21.84■■□□□ 1.09
CXCL12-206ENST00000395795 CRKLP46109 303 aaKnown RBP21.84■■□□□ 1.09
CXCL12-206ENST00000395795 SLC39A6Q13433 755 aa21.84■■□□□ 1.09
CXCL12-206ENST00000395795 GYS1P13807 737 aa21.83■■□□□ 1.09
CXCL12-206ENST00000395795 ADRA2BP18089 450 aa21.83■■□□□ 1.09
CXCL12-206ENST00000395795 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.09
CXCL12-206ENST00000395795 IL17REQ8NFR9 667 aa21.83■■□□□ 1.09
CXCL12-206ENST00000395795 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
CXCL12-206ENST00000395795 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
CXCL12-206ENST00000395795 DNAJC10Q8IXB1 793 aa21.82■■□□□ 1.08
CXCL12-206ENST00000395795 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
CXCL12-206ENST00000395795 KIAA1551Q9HCM1 1747 aa21.82■■□□□ 1.08
CXCL12-206ENST00000395795 MMP10P09238 476 aa21.81■■□□□ 1.08
CXCL12-206ENST00000395795 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
CXCL12-206ENST00000395795 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
CXCL12-206ENST00000395795 KIF13BQ9NQT8 1826 aa21.8■■□□□ 1.08
CXCL12-206ENST00000395795 CYP19A1P11511 503 aaPredicted RBP21.79■■□□□ 1.08
CXCL12-206ENST00000395795 SIPA1L3O60292 1781 aaPredicted RBP21.79■■□□□ 1.08
CXCL12-206ENST00000395795 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
CXCL12-206ENST00000395795 SRP68Q9UHB9 627 aaKnown RBP21.78■■□□□ 1.08
CXCL12-206ENST00000395795 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
CXCL12-206ENST00000395795 NLGN1Q8N2Q7 840 aa21.77■■□□□ 1.08
CXCL12-206ENST00000395795 C10orf71Q711Q0 1435 aa21.77■■□□□ 1.08
CXCL12-206ENST00000395795 USP42Q9H9J4 1324 aaKnown RBP21.77■■□□□ 1.07
CXCL12-206ENST00000395795 PXDNLA1KZ92 1463 aa21.77■■□□□ 1.07
CXCL12-206ENST00000395795 SOS1Q07889 1333 aaPredicted RBP21.76■■□□□ 1.07
CXCL12-206ENST00000395795 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
CXCL12-206ENST00000395795 RFC4P35249 363 aa21.75■■□□□ 1.07
CXCL12-206ENST00000395795 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
CXCL12-206ENST00000395795 CCDC87Q9NVE4 849 aa21.75■■□□□ 1.07
CXCL12-206ENST00000395795 GRIN3BO60391 1043 aa21.74■■□□□ 1.07
CXCL12-206ENST00000395795 DDR1Q08345 913 aa21.74■■□□□ 1.07
CXCL12-206ENST00000395795 FKBP8Q14318 412 aa21.74■■□□□ 1.07
CXCL12-206ENST00000395795 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
CXCL12-206ENST00000395795 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
CXCL12-206ENST00000395795 ZBTB1Q9Y2K1 713 aa21.73■■□□□ 1.07
CXCL12-206ENST00000395795 ZNF496Q96IT1 587 aaPredicted RBP21.72■■□□□ 1.07
CXCL12-206ENST00000395795 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
CXCL12-206ENST00000395795 TM4SF1P30408 202 aa21.71■■□□□ 1.07
CXCL12-206ENST00000395795 BCL2L12Q9HB09 334 aa21.71■■□□□ 1.07
CXCL12-206ENST00000395795 KCNQ3O43525 872 aa21.7■■□□□ 1.06
CXCL12-206ENST00000395795 ZNF790Q6PG37 636 aa21.7■■□□□ 1.06
CXCL12-206ENST00000395795 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
CXCL12-206ENST00000395795 FCHSD2O94868 740 aa21.69■■□□□ 1.06
CXCL12-206ENST00000395795 U2AF1L5P0DN76 240 aaPredicted RBP21.69■■□□□ 1.06
CXCL12-206ENST00000395795 KCNA3P22001 575 aa21.69■■□□□ 1.06
CXCL12-206ENST00000395795 U2AF1Q01081 240 aaKnown RBP eCLIP21.69■■□□□ 1.06
CXCL12-206ENST00000395795 ADCY9O60503 1353 aa21.69■■□□□ 1.06
CXCL12-206ENST00000395795 HEG1Q9ULI3 1381 aa21.69■■□□□ 1.06
CXCL12-206ENST00000395795 TGFB2P61812 414 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms