RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
CXCL1-201ENST00000395761 LY75O60449 1722 aa21.93■■□□□ 1.1
CXCL1-201ENST00000395761 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
CXCL1-201ENST00000395761 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
CXCL1-201ENST00000395761 ADAMTS7Q9UKP4 1686 aa21.93■■□□□ 1.1
CXCL1-201ENST00000395761 DCTN1Q14203 1278 aa21.92■■□□□ 1.1
CXCL1-201ENST00000395761 MCM10Q7L590 875 aa21.92■■□□□ 1.1
CXCL1-201ENST00000395761 MRC1P22897 1456 aa21.9■■□□□ 1.1
CXCL1-201ENST00000395761 CEMIPQ8WUJ3 1361 aa21.9■■□□□ 1.1
CXCL1-201ENST00000395761 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
CXCL1-201ENST00000395761 SIK1P57059 783 aa21.9■■□□□ 1.1
CXCL1-201ENST00000395761 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
CXCL1-201ENST00000395761 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
CXCL1-201ENST00000395761 RUNDC1Q96C34 613 aa21.9■■□□□ 1.1
CXCL1-201ENST00000395761 HTATSF1O43719 755 aaKnown RBP21.89■■□□□ 1.09
CXCL1-201ENST00000395761 TEFQ10587 303 aa21.89■■□□□ 1.09
CXCL1-201ENST00000395761 SLC39A6Q13433 755 aa21.89■■□□□ 1.09
CXCL1-201ENST00000395761 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
CXCL1-201ENST00000395761 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
CXCL1-201ENST00000395761 STK32BQ9NY57 414 aa21.89■■□□□ 1.09
CXCL1-201ENST00000395761 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
CXCL1-201ENST00000395761 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
CXCL1-201ENST00000395761 RBM42Q9BTD8 480 aaKnown RBP21.88■■□□□ 1.09
CXCL1-201ENST00000395761 RRP7AQ9Y3A4 280 aaKnown RBP21.88■■□□□ 1.09
CXCL1-201ENST00000395761 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
CXCL1-201ENST00000395761 TMPOP42166 694 aaKnown RBP21.87■■□□□ 1.09
CXCL1-201ENST00000395761 RIPK4P57078 832 aa21.87■■□□□ 1.09
CXCL1-201ENST00000395761 AKT1S1Q96B36 256 aa21.87■■□□□ 1.09
CXCL1-201ENST00000395761 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
CXCL1-201ENST00000395761 ATP6V1AP38606 617 aa21.86■■□□□ 1.09
CXCL1-201ENST00000395761 ITPK1Q13572 414 aa21.86■■□□□ 1.09
CXCL1-201ENST00000395761 THUMPD2Q9BTF0 503 aaKnown RBP21.86■■□□□ 1.09
CXCL1-201ENST00000395761 NEUROD2Q15784 382 aa21.85■■□□□ 1.09
CXCL1-201ENST00000395761 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
CXCL1-201ENST00000395761 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
CXCL1-201ENST00000395761 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
CXCL1-201ENST00000395761 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
CXCL1-201ENST00000395761 APAF1O14727 1248 aa21.82■■□□□ 1.08
CXCL1-201ENST00000395761 KCNQ3O43525 872 aa21.82■■□□□ 1.08
CXCL1-201ENST00000395761 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
CXCL1-201ENST00000395761 ZNF790Q6PG37 636 aa21.81■■□□□ 1.08
CXCL1-201ENST00000395761 C5P01031 1676 aa21.8■■□□□ 1.08
CXCL1-201ENST00000395761 MIER1Q8N108 512 aa21.8■■□□□ 1.08
CXCL1-201ENST00000395761 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
CXCL1-201ENST00000395761 TFCP2L1Q9NZI6 479 aa21.8■■□□□ 1.08
CXCL1-201ENST00000395761 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
CXCL1-201ENST00000395761 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
CXCL1-201ENST00000395761 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
CXCL1-201ENST00000395761 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
CXCL1-201ENST00000395761 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
CXCL1-201ENST00000395761 TAF1LQ8IZX4 1826 aa21.78■■□□□ 1.08
CXCL1-201ENST00000395761 FAM9BQ8IZU0 186 aa21.78■■□□□ 1.08
CXCL1-201ENST00000395761 ZNF496Q96IT1 587 aaPredicted RBP21.78■■□□□ 1.08
CXCL1-201ENST00000395761 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
CXCL1-201ENST00000395761 SMIM5Q71RC9 77 aa21.77■■□□□ 1.08
CXCL1-201ENST00000395761 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
CXCL1-201ENST00000395761 DNAJC10Q8IXB1 793 aa21.77■■□□□ 1.08
CXCL1-201ENST00000395761 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
CXCL1-201ENST00000395761 PNPLA7Q6ZV29 1317 aa21.77■■□□□ 1.07
CXCL1-201ENST00000395761 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
CXCL1-201ENST00000395761 AK7Q96M32 723 aa21.76■■□□□ 1.07
CXCL1-201ENST00000395761 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
CXCL1-201ENST00000395761 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
CXCL1-201ENST00000395761 VSIG10Q8N0Z9 540 aa21.74■■□□□ 1.07
CXCL1-201ENST00000395761 UBR2Q8IWV8 1755 aa21.74■■□□□ 1.07
CXCL1-201ENST00000395761 TJP1Q07157 1748 aa21.73■■□□□ 1.07
CXCL1-201ENST00000395761 COL23A1Q86Y22 540 aaPredicted RBP21.73■■□□□ 1.07
CXCL1-201ENST00000395761 FMNL2Q96PY5 1086 aa21.73■■□□□ 1.07
CXCL1-201ENST00000395761 HEG1Q9ULI3 1381 aa21.73■■□□□ 1.07
CXCL1-201ENST00000395761 CASZ1Q86V15 1759 aa21.72■■□□□ 1.07
CXCL1-201ENST00000395761 TUBGCP6Q96RT7 1819 aa21.72■■□□□ 1.07
CXCL1-201ENST00000395761 GNPATO15228 680 aa21.72■■□□□ 1.07
CXCL1-201ENST00000395761 ZBTB7AO95365 584 aa21.72■■□□□ 1.07
CXCL1-201ENST00000395761 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
CXCL1-201ENST00000395761 RC3H1Q5TC82 1133 aaKnown RBP21.72■■□□□ 1.07
CXCL1-201ENST00000395761 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
CXCL1-201ENST00000395761 CYP19A1P11511 503 aaPredicted RBP21.71■■□□□ 1.07
CXCL1-201ENST00000395761 COL5A3P25940 1745 aaPredicted RBP21.71■■□□□ 1.07
CXCL1-201ENST00000395761 PRAMEF22A3QJZ6 481 aa21.7■■□□□ 1.06
CXCL1-201ENST00000395761 MSH5O43196 834 aa21.7■■□□□ 1.06
CXCL1-201ENST00000395761 PHF14O94880 888 aa21.7■■□□□ 1.06
CXCL1-201ENST00000395761 INTS5Q6P9B9 1019 aaKnown RBP21.7■■□□□ 1.06
CXCL1-201ENST00000395761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
CXCL1-201ENST00000395761 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
CXCL1-201ENST00000395761 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
CXCL1-201ENST00000395761 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
CXCL1-201ENST00000395761 RPS6KA4O75676 772 aa21.68■■□□□ 1.06
CXCL1-201ENST00000395761 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
CXCL1-201ENST00000395761 MYH14Q7Z406 1995 aaKnown RBP21.67■■□□□ 1.06
CXCL1-201ENST00000395761 UBR3Q6ZT12 1888 aa21.67■■□□□ 1.06
CXCL1-201ENST00000395761 SSFA2P28290 1259 aa21.67■■□□□ 1.06
CXCL1-201ENST00000395761 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
CXCL1-201ENST00000395761 FLAD1Q8NFF5 587 aa21.67■■□□□ 1.06
CXCL1-201ENST00000395761 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
CXCL1-201ENST00000395761 RTCBQ9Y3I0 505 aaKnown RBP21.67■■□□□ 1.06
CXCL1-201ENST00000395761 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
CXCL1-201ENST00000395761 USP16Q9Y5T5 823 aa21.67■■□□□ 1.06
CXCL1-201ENST00000395761 CHL1O00533 1208 aa21.66■■□□□ 1.06
CXCL1-201ENST00000395761 SNRPA1P09661 255 aaKnown RBP21.66■■□□□ 1.06
CXCL1-201ENST00000395761 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms