RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
SMARCAD1-203ENST00000394961 SOX12O15370 315 aa8.63□□□□□ -1.03
SMARCAD1-203ENST00000394961 DCAF5Q96JK2 942 aa8.63□□□□□ -1.03
SMARCAD1-203ENST00000394961 TFCP2L1Q9NZI6 479 aa8.63□□□□□ -1.03
SMARCAD1-203ENST00000394961 ANKRD31Q8N7Z5 1873 aa8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 PIGBQ92521 554 aa8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 KDM3BQ7LBC6 1761 aa8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 FER1L6Q2WGJ9 1857 aa8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 RGL2O15211 777 aa8.62□□□□□ -1.03
SMARCAD1-203ENST00000394961 TGFB2P61812 414 aa8.61□□□□□ -1.03
SMARCAD1-203ENST00000394961 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
SMARCAD1-203ENST00000394961 ATP10DQ9P241 1426 aa8.61□□□□□ -1.03
SMARCAD1-203ENST00000394961 C1QTNF8P60827 252 aa8.61□□□□□ -1.03
SMARCAD1-203ENST00000394961 LOC102724428A0A0B4J2F2 783 aa8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 SIK1P57059 783 aa8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 EIF4G2P78344 907 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
SMARCAD1-203ENST00000394961 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
SMARCAD1-203ENST00000394961 COL11A2P13942 1736 aaPredicted RBP8.59□□□□□ -1.03
SMARCAD1-203ENST00000394961 LTV1Q96GA3 475 aaPredicted RBP8.59□□□□□ -1.03
SMARCAD1-203ENST00000394961 TMOD3Q9NYL9 352 aa8.59□□□□□ -1.03
SMARCAD1-203ENST00000394961 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.04
SMARCAD1-203ENST00000394961 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.04
SMARCAD1-203ENST00000394961 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 IL13P35225 146 aa8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 AK7Q96M32 723 aa8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 ITPK1Q13572 414 aa8.58□□□□□ -1.04
SMARCAD1-203ENST00000394961 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
SMARCAD1-203ENST00000394961 NLGN1Q8N2Q7 840 aa8.57□□□□□ -1.04
SMARCAD1-203ENST00000394961 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
SMARCAD1-203ENST00000394961 FBLN1P23142 703 aa8.57□□□□□ -1.04
SMARCAD1-203ENST00000394961 AKAP4Q5JQC9 854 aa8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 PER1O15534 1290 aaPredicted RBP8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 GPR162Q16538 588 aa8.56□□□□□ -1.04
SMARCAD1-203ENST00000394961 RIC1Q4ADV7 1423 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 ANKRD36CQ5JPF3 1778 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 ADAMTSL1Q8N6G6 1762 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 SCN4AP35499 1836 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 CEMIPQ8WUJ3 1361 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
SMARCAD1-203ENST00000394961 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 MPRIPQ6WCQ1 1025 aa8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 PANK3Q9H999 370 aa8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
SMARCAD1-203ENST00000394961 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 GYS1P13807 737 aa8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 TM4SF1P30408 202 aa8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 CCDC87Q9NVE4 849 aa8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 ATP6V1AP38606 617 aa8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
SMARCAD1-203ENST00000394961 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
SMARCAD1-203ENST00000394961 LAMB2P55268 1798 aa8.52□□□□□ -1.05
SMARCAD1-203ENST00000394961 KIF7Q2M1P5 1343 aa8.52□□□□□ -1.05
SMARCAD1-203ENST00000394961 KCNA3P22001 575 aa8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 GNPATO15228 680 aa8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 ZNF530Q6P9A1 599 aaPredicted RBP8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 MORC1Q86VD1 984 aa8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 LTBP3Q9NS15 1303 aa8.51□□□□□ -1.05
SMARCAD1-203ENST00000394961 C1orf141Q5JVX7 400 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 NUP98P52948 1817 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 CACNA1SQ13698 1873 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 KCNQ4P56696 695 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 CABP4P57796 275 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 LRRC37AA6NMS7 1700 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 KNSTRNQ9Y448 316 aa8.5□□□□□ -1.05
SMARCAD1-203ENST00000394961 A0A087WZG4 1122 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 KIF3CO14782 793 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 COL15A1P39059 1388 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 POLRMTO00411 1230 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 HSPA6P17066 643 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 NARFQ9UHQ1 456 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 MMP10P09238 476 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 CRKLP46109 303 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 MTHFSP49914 203 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 FSTL1Q12841 308 aa8.49□□□□□ -1.05
SMARCAD1-203ENST00000394961 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
SMARCAD1-203ENST00000394961 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms