RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
SFMBT1-201ENST00000394752 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
SFMBT1-201ENST00000394752 ZC3H6P61129 1189 aaKnown RBP17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 FIBPO43427 364 aa17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 SF3A1Q15459 793 aaKnown RBP17.73■□□□□ 0.43
SFMBT1-201ENST00000394752 SSFA2P28290 1259 aa17.72■□□□□ 0.43
SFMBT1-201ENST00000394752 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
SFMBT1-201ENST00000394752 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
SFMBT1-201ENST00000394752 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
SFMBT1-201ENST00000394752 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
SFMBT1-201ENST00000394752 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
SFMBT1-201ENST00000394752 RICTORQ6R327 1708 aa17.71■□□□□ 0.43
SFMBT1-201ENST00000394752 MYOM1P52179 1685 aa17.71■□□□□ 0.42
SFMBT1-201ENST00000394752 MYO3AQ8NEV4 1616 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 MED14O60244 1454 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 TMEM131LA2VDJ0 1609 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 HOXC9P31274 260 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 FLIIQ13045 1269 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 MEIS3Q99687 375 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 FAM13BQ9NYF5 915 aa17.7■□□□□ 0.42
SFMBT1-201ENST00000394752 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
SFMBT1-201ENST00000394752 FBXW7Q969H0 707 aa17.69■□□□□ 0.42
SFMBT1-201ENST00000394752 TULP1O00294 542 aaPredicted RBP17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 ZBTB7BO15156 539 aaPredicted RBP17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 MYL6BP14649 208 aa17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 CIZ1Q9ULV3 898 aaPredicted RBP17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 USP6P35125 1406 aa17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 EVA1CP58658 441 aa17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
SFMBT1-201ENST00000394752 ANXA1P04083 346 aa17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 KRT28Q7Z3Y7 464 aa17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 DLC1Q96QB1 1528 aa17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 CHL1O00533 1208 aa17.67■□□□□ 0.42
SFMBT1-201ENST00000394752 ARHGEF28Q8N1W1 1705 aaKnown RBP17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 DNAJC2Q99543 621 aaKnown RBP17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 MX1P20591 662 aa17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 R3HCC1Q9Y3T6 440 aaKnown RBP17.66■□□□□ 0.42
SFMBT1-201ENST00000394752 BECN2A8MW95 431 aa17.65■□□□□ 0.42
SFMBT1-201ENST00000394752 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
SFMBT1-201ENST00000394752 KIF3AQ9Y496 699 aa17.64■□□□□ 0.42
SFMBT1-201ENST00000394752 ARHGEF10O15013 1369 aa17.64■□□□□ 0.42
SFMBT1-201ENST00000394752 APPP05067 770 aa17.64■□□□□ 0.41
SFMBT1-201ENST00000394752 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
SFMBT1-201ENST00000394752 MCM2P49736 904 aa17.64■□□□□ 0.41
SFMBT1-201ENST00000394752 STK3Q13188 491 aa17.64■□□□□ 0.41
SFMBT1-201ENST00000394752 ESPNB1AK53 854 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 MBD3O95983 291 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 PANK2Q9BZ23 570 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 GOLGA6L19H0YKK7 550 aa17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.63■□□□□ 0.41
SFMBT1-201ENST00000394752 AACSQ86V21 672 aa17.62■□□□□ 0.41
SFMBT1-201ENST00000394752 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
SFMBT1-201ENST00000394752 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
SFMBT1-201ENST00000394752 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
SFMBT1-201ENST00000394752 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
SFMBT1-201ENST00000394752 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 SIGLEC1Q9BZZ2 1709 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 IP6K1Q92551 441 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 KDM4AO75164 1064 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 SDSP20132 328 aa17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 ISY1Q9ULR0 285 aaKnown RBP17.61■□□□□ 0.41
SFMBT1-201ENST00000394752 SYCE3A1L190 88 aa17.6■□□□□ 0.41
SFMBT1-201ENST00000394752 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
SFMBT1-201ENST00000394752 CPLX1O14810 134 aa17.6■□□□□ 0.41
SFMBT1-201ENST00000394752 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
SFMBT1-201ENST00000394752 CREBRFQ8IUR6 639 aa17.6■□□□□ 0.41
SFMBT1-201ENST00000394752 ABCC4O15439 1325 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 GCP02774 474 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 MSH6P52701 1360 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms