RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
PC-201ENST00000393955 GSPT1P15170 499 aaKnown RBP11.96□□□□□ -0.5
PC-201ENST00000393955 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.5
PC-201ENST00000393955 TECPR2O15040 1411 aa11.96□□□□□ -0.5
PC-201ENST00000393955 BRPF1P55201 1214 aaPredicted RBP11.95□□□□□ -0.5
PC-201ENST00000393955 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
PC-201ENST00000393955 CCDC30Q5VVM6 783 aa11.95□□□□□ -0.5
PC-201ENST00000393955 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
PC-201ENST00000393955 ANO2Q9NQ90 1003 aa11.95□□□□□ -0.5
PC-201ENST00000393955 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
PC-201ENST00000393955 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
PC-201ENST00000393955 AEBP2Q6ZN18 517 aaPredicted RBP11.94□□□□□ -0.5
PC-201ENST00000393955 G2E3Q7L622 706 aa11.94□□□□□ -0.5
PC-201ENST00000393955 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
PC-201ENST00000393955 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
PC-201ENST00000393955 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
PC-201ENST00000393955 TOPAZ1Q8N9V7 1692 aa11.93□□□□□ -0.5
PC-201ENST00000393955 CABP4P57796 275 aa11.93□□□□□ -0.5
PC-201ENST00000393955 NEUROD6Q96NK8 337 aa11.93□□□□□ -0.5
PC-201ENST00000393955 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
PC-201ENST00000393955 TBC1D9Q6ZT07 1266 aa11.93□□□□□ -0.5
PC-201ENST00000393955 RGPD1P0DJD0 1748 aa11.93□□□□□ -0.5
PC-201ENST00000393955 MTHFSDQ2M296 383 aaKnown RBP11.93□□□□□ -0.5
PC-201ENST00000393955 EYA1Q99502 592 aa11.92□□□□□ -0.5
PC-201ENST00000393955 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
PC-201ENST00000393955 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
PC-201ENST00000393955 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
PC-201ENST00000393955 MCCP23508 829 aa11.92□□□□□ -0.5
PC-201ENST00000393955 MEIS3Q99687 375 aa11.92□□□□□ -0.5
PC-201ENST00000393955 USP6P35125 1406 aa11.92□□□□□ -0.5
PC-201ENST00000393955 DDIT3P35638 169 aa11.91□□□□□ -0.5
PC-201ENST00000393955 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
PC-201ENST00000393955 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
PC-201ENST00000393955 CHL1O00533 1208 aa11.91□□□□□ -0.5
PC-201ENST00000393955 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
PC-201ENST00000393955 CRB1P82279 1406 aa11.91□□□□□ -0.5
PC-201ENST00000393955 MSH6P52701 1360 aa11.91□□□□□ -0.5
PC-201ENST00000393955 MEX3CQ5U5Q3 659 aaKnown RBP11.9□□□□□ -0.5
PC-201ENST00000393955 NALCNQ8IZF0 1738 aa11.9□□□□□ -0.5
PC-201ENST00000393955 DDX58O95786 925 aaKnown RBP11.9□□□□□ -0.5
PC-201ENST00000393955 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
PC-201ENST00000393955 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
PC-201ENST00000393955 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
PC-201ENST00000393955 PDE4CQ08493 712 aa11.9□□□□□ -0.5
PC-201ENST00000393955 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■□□□□ 9.7
PC-201ENST00000393955 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
PC-201ENST00000393955 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
PC-201ENST00000393955 BMP2KLQ5H9B9 411 aa11.89□□□□□ -0.51
PC-201ENST00000393955 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
PC-201ENST00000393955 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
PC-201ENST00000393955 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
PC-201ENST00000393955 KCNH5Q8NCM2 988 aa11.89□□□□□ -0.51
PC-201ENST00000393955 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
PC-201ENST00000393955 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
PC-201ENST00000393955 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
PC-201ENST00000393955 ISY1Q9ULR0 285 aaKnown RBP11.88□□□□□ -0.51
PC-201ENST00000393955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
PC-201ENST00000393955 GCP02774 474 aa11.88□□□□□ -0.51
PC-201ENST00000393955 GNAI2P04899 355 aa11.88□□□□□ -0.51
PC-201ENST00000393955 MCM4P33991 863 aa11.88□□□□□ -0.51
PC-201ENST00000393955 TBX22Q9Y458 520 aa11.88□□□□□ -0.51
PC-201ENST00000393955 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
PC-201ENST00000393955 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
PC-201ENST00000393955 MARF1Q9Y4F3 1742 aaKnown RBP11.87□□□□□ -0.51
PC-201ENST00000393955 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
PC-201ENST00000393955 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
PC-201ENST00000393955 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
PC-201ENST00000393955 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
PC-201ENST00000393955 FOSBP53539 338 aa11.87□□□□□ -0.51
PC-201ENST00000393955 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
PC-201ENST00000393955 KDM4AO75164 1064 aa11.86□□□□□ -0.51
PC-201ENST00000393955 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
PC-201ENST00000393955 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
PC-201ENST00000393955 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
PC-201ENST00000393955 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
PC-201ENST00000393955 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
PC-201ENST00000393955 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
PC-201ENST00000393955 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
PC-201ENST00000393955 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
PC-201ENST00000393955 GCC1Q96CN9 775 aa11.85□□□□□ -0.51
PC-201ENST00000393955 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
PC-201ENST00000393955 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
PC-201ENST00000393955 PLEKHG1Q9ULL1 1385 aa11.85□□□□□ -0.51
PC-201ENST00000393955 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
PC-201ENST00000393955 GNAI3P08754 354 aa11.85□□□□□ -0.51
PC-201ENST00000393955 FLIIQ13045 1269 aa11.85□□□□□ -0.51
PC-201ENST00000393955 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
PC-201ENST00000393955 SPG7Q9UQ90 795 aa11.85□□□□□ -0.51
PC-201ENST00000393955 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
PC-201ENST00000393955 BICDL1Q6ZP65 573 aa11.84□□□□□ -0.51
PC-201ENST00000393955 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
PC-201ENST00000393955 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
PC-201ENST00000393955 PKP1Q13835 747 aa11.84□□□□□ -0.51
PC-201ENST00000393955 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
PC-201ENST00000393955 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
PC-201ENST00000393955 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
PC-201ENST00000393955 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.51
PC-201ENST00000393955 HOXC9P31274 260 aa11.83□□□□□ -0.51
PC-201ENST00000393955 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.51
PC-201ENST00000393955 ZMYND15Q9H091 742 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms