RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RCAN3Q9UKA8 241 aa31.45■■■□□ 2.63
LRFN4-202ENST00000393952 MARCH10Q8NA82 808 aaPredicted RBP31.44■■■□□ 2.62
LRFN4-202ENST00000393952 NFATC2IPQ8NCF5 419 aa31.43■■■□□ 2.62
LRFN4-202ENST00000393952 BTBD11A6QL63 1104 aa31.42■■■□□ 2.62
LRFN4-202ENST00000393952 ERVV-2B6SEH9 535 aa31.42■■■□□ 2.62
LRFN4-202ENST00000393952 ONECUT3O60422 494 aaPredicted RBP31.42■■■□□ 2.62
LRFN4-202ENST00000393952 CABP4P57796 275 aa31.42■■■□□ 2.62
LRFN4-202ENST00000393952 C8orf58Q8NAV2 365 aa31.4■■■□□ 2.62
LRFN4-202ENST00000393952 SUPT16HQ9Y5B9 1047 aaKnown RBP31.4■■■□□ 2.62
LRFN4-202ENST00000393952 KRT24Q2M2I5 525 aa31.39■■■□□ 2.62
LRFN4-202ENST00000393952 TSPYL6Q8N831 410 aa31.39■■■□□ 2.62
LRFN4-202ENST00000393952 KCNQ3O43525 872 aa31.39■■■□□ 2.61
LRFN4-202ENST00000393952 DOT1LQ8TEK3 1739 aa31.38■■■□□ 2.61
LRFN4-202ENST00000393952 ITGB4P16144 1822 aa31.38■■■□□ 2.61
LRFN4-202ENST00000393952 ELL2O00472 640 aaPredicted RBP31.37■■■□□ 2.61
LRFN4-202ENST00000393952 SEPT12Q8IYM1 358 aa31.37■■■□□ 2.61
LRFN4-202ENST00000393952 KAT6BQ8WYB5 2073 aa31.36■■■□□ 2.61
LRFN4-202ENST00000393952 CT47B1P0C2W7 299 aaPredicted RBP31.36■■■□□ 2.61
LRFN4-202ENST00000393952 RBM6P78332 1123 aaKnown RBP31.35■■■□□ 2.61
LRFN4-202ENST00000393952 TWISTNBQ3B726 338 aaPredicted RBP31.35■■■□□ 2.61
LRFN4-202ENST00000393952 RGS17Q9UGC6 210 aaPredicted RBP31.35■■■□□ 2.61
LRFN4-202ENST00000393952 SLC39A6Q13433 755 aa31.34■■■□□ 2.61
LRFN4-202ENST00000393952 VAMP4O75379 141 aa31.34■■■□□ 2.61
LRFN4-202ENST00000393952 EIF4A1P60842 406 aaKnown RBP31.32■■■□□ 2.6
LRFN4-202ENST00000393952 TMOD3Q9NYL9 352 aa31.32■■■□□ 2.6
LRFN4-202ENST00000393952 RARSP54136 660 aaKnown RBP31.31■■■□□ 2.6
LRFN4-202ENST00000393952 ZNF790Q6PG37 636 aa31.31■■■□□ 2.6
LRFN4-202ENST00000393952 ILDR1Q86SU0 546 aaPredicted RBP31.31■■■□□ 2.6
LRFN4-202ENST00000393952 PAPPAQ13219 1627 aa31.3■■■□□ 2.6
LRFN4-202ENST00000393952 BRWD3Q6RI45 1802 aa31.3■■■□□ 2.6
LRFN4-202ENST00000393952 BCAR3O75815 825 aa31.29■■■□□ 2.6
LRFN4-202ENST00000393952 PIGBQ92521 554 aa31.29■■■□□ 2.6
LRFN4-202ENST00000393952 PRIM1P49642 420 aaKnown RBP31.28■■■□□ 2.6
LRFN4-202ENST00000393952 ACSBG1Q96GR2 724 aa31.28■■■□□ 2.6
LRFN4-202ENST00000393952 BCL9O00512 1426 aa31.28■■■□□ 2.6
LRFN4-202ENST00000393952 SYTL4Q96C24 671 aaPredicted RBP31.27■■■□□ 2.6
LRFN4-202ENST00000393952 RNF123Q5XPI4 1314 aa31.27■■■□□ 2.6
LRFN4-202ENST00000393952 POTEAQ6S8J7 498 aa31.26■■■□□ 2.6
LRFN4-202ENST00000393952 TTC5Q8N0Z6 440 aa31.26■■■□□ 2.6
LRFN4-202ENST00000393952 BCL2L13Q9BXK5 485 aa31.26■■■□□ 2.6
LRFN4-202ENST00000393952 RXRBP28702 533 aa31.26■■■□□ 2.59
LRFN4-202ENST00000393952 FAM182BQ5T319 152 aa31.26■■■□□ 2.59
LRFN4-202ENST00000393952 SSH1Q8WYL5 1049 aa31.26■■■□□ 2.59
LRFN4-202ENST00000393952 UBR2Q8IWV8 1755 aa31.25■■■□□ 2.59
LRFN4-202ENST00000393952 ZNF428Q96B54 188 aa31.25■■■□□ 2.59
LRFN4-202ENST00000393952 HEG1Q9ULI3 1381 aa31.24■■■□□ 2.59
LRFN4-202ENST00000393952 RRP1P56182 461 aaKnown RBP31.23■■■□□ 2.59
LRFN4-202ENST00000393952 ZNF496Q96IT1 587 aaPredicted RBP31.23■■■□□ 2.59
LRFN4-202ENST00000393952 SMC4Q9NTJ3 1288 aa31.22■■■□□ 2.59
LRFN4-202ENST00000393952 SOS1Q07889 1333 aaPredicted RBP31.22■■■□□ 2.59
LRFN4-202ENST00000393952 TCERG1O14776 1098 aaKnown RBP31.22■■■□□ 2.59
LRFN4-202ENST00000393952 ALDH1L2Q3SY69 923 aa31.22■■■□□ 2.59
LRFN4-202ENST00000393952 ASAP1Q9ULH1 1129 aa31.22■■■□□ 2.59
LRFN4-202ENST00000393952 KCPQ6ZWJ8 1503 aa31.21■■■□□ 2.59
LRFN4-202ENST00000393952 GIGYF1O75420 1035 aaPredicted RBP31.2■■■□□ 2.58
LRFN4-202ENST00000393952 FMNL2Q96PY5 1086 aa31.2■■■□□ 2.58
LRFN4-202ENST00000393952 ATG3Q9NT62 314 aa31.2■■■□□ 2.58
LRFN4-202ENST00000393952 C5P01031 1676 aa31.2■■■□□ 2.58
LRFN4-202ENST00000393952 KCNQ2O43526 872 aa31.19■■■□□ 2.58
LRFN4-202ENST00000393952 KRT27Q7Z3Y8 459 aa31.19■■■□□ 2.58
LRFN4-202ENST00000393952 PLIN1O60240 522 aa31.18■■■□□ 2.58
LRFN4-202ENST00000393952 HOXB7P09629 217 aa31.18■■■□□ 2.58
LRFN4-202ENST00000393952 PRAMEF22A3QJZ6 481 aa31.17■■■□□ 2.58
LRFN4-202ENST00000393952 SBF2Q86WG5 1849 aa31.17■■■□□ 2.58
LRFN4-202ENST00000393952 NHSQ6T4R5 1651 aa31.17■■■□□ 2.58
LRFN4-202ENST00000393952 RGS12O14924 1447 aa31.17■■■□□ 2.58
LRFN4-202ENST00000393952 MRPL50Q8N5N7 158 aaKnown RBP31.16■■■□□ 2.58
LRFN4-202ENST00000393952 NECTIN2Q92692 538 aa31.16■■■□□ 2.58
LRFN4-202ENST00000393952 PTCD1O75127 700 aaKnown RBP31.15■■■□□ 2.58
LRFN4-202ENST00000393952 EIF2S2P20042 333 aaKnown RBP31.14■■■□□ 2.58
LRFN4-202ENST00000393952 HDGFL1Q5TGJ6 251 aa31.14■■■□□ 2.58
LRFN4-202ENST00000393952 IRX6P78412 446 aaPredicted RBP31.13■■■□□ 2.57
LRFN4-202ENST00000393952 CCDC30Q5VVM6 783 aa31.13■■■□□ 2.57
LRFN4-202ENST00000393952 SNRPA1P09661 255 aaKnown RBP31.13■■■□□ 2.57
LRFN4-202ENST00000393952 PTF1AQ7RTS3 328 aa31.13■■■□□ 2.57
LRFN4-202ENST00000393952 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.13■■■□□ 2.57
LRFN4-202ENST00000393952 FRAT1Q92837 279 aaPredicted RBP31.13■■■□□ 2.57
LRFN4-202ENST00000393952 NEFLP07196 543 aa31.11■■■□□ 2.57
LRFN4-202ENST00000393952 BRPF1P55201 1214 aaPredicted RBP31.11■■■□□ 2.57
LRFN4-202ENST00000393952 LAMB4A4D0S4 1761 aa31.11■■■□□ 2.57
LRFN4-202ENST00000393952 CANXP27824 592 aaKnown RBP31.1■■■□□ 2.57
LRFN4-202ENST00000393952 BTAF1O14981 1849 aa31.1■■■□□ 2.57
LRFN4-202ENST00000393952 RBM42Q9BTD8 480 aaKnown RBP31.09■■■□□ 2.57
LRFN4-202ENST00000393952 STK31Q9BXU1 1019 aa31.09■■■□□ 2.57
LRFN4-202ENST00000393952 FAM196AQ6ZSG2 479 aa31.09■■■□□ 2.57
LRFN4-202ENST00000393952 NOB1Q9ULX3 412 aaKnown RBP31.09■■■□□ 2.57
LRFN4-202ENST00000393952 CACNA1FO60840 1977 aa31.08■■■□□ 2.57
LRFN4-202ENST00000393952 KIF16BQ96L93 1317 aa31.08■■■□□ 2.57
LRFN4-202ENST00000393952 SLC4A2P04920 1241 aa31.08■■■□□ 2.57
LRFN4-202ENST00000393952 CHMP4AQ9BY43 222 aa31.07■■■□□ 2.56
LRFN4-202ENST00000393952 USP16Q9Y5T5 823 aa31.07■■■□□ 2.56
LRFN4-202ENST00000393952 C20orf194Q5TEA3 1177 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 ZKSCAN2Q63HK3 967 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 CHPF2Q9P2E5 772 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 PALLDQ8WX93 1383 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 SMARCC1Q92922 1105 aaPredicted RBP31.05■■■□□ 2.56
LRFN4-202ENST00000393952 SLC4A9Q96Q91 983 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 TNNQ9UQP3 1299 aa31.05■■■□□ 2.56
LRFN4-202ENST00000393952 FKBP8Q14318 412 aa31.04■■■□□ 2.56
LRFN4-202ENST00000393952 VSIG10Q8N0Z9 540 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms