RNA–Protein interactions for RNA: ENST00000393647.2

AC004884.1-201, humanhuman

BASIC

Gene AC004884.1, Length 319 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004884.1-201ENST00000393647 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
AC004884.1-201ENST00000393647 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
AC004884.1-201ENST00000393647 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
AC004884.1-201ENST00000393647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
AC004884.1-201ENST00000393647 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
AC004884.1-201ENST00000393647 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
AC004884.1-201ENST00000393647 C5P01031 1676 aa16.8■□□□□ 0.28
AC004884.1-201ENST00000393647 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
AC004884.1-201ENST00000393647 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
AC004884.1-201ENST00000393647 TAF1LQ8IZX4 1826 aa16.79■□□□□ 0.28
AC004884.1-201ENST00000393647 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
AC004884.1-201ENST00000393647 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
AC004884.1-201ENST00000393647 GNPATO15228 680 aa16.78■□□□□ 0.28
AC004884.1-201ENST00000393647 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
AC004884.1-201ENST00000393647 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
AC004884.1-201ENST00000393647 GPR162Q16538 588 aa16.77■□□□□ 0.28
AC004884.1-201ENST00000393647 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
AC004884.1-201ENST00000393647 KDRP35968 1356 aa16.77■□□□□ 0.27
AC004884.1-201ENST00000393647 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
AC004884.1-201ENST00000393647 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
AC004884.1-201ENST00000393647 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
AC004884.1-201ENST00000393647 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
AC004884.1-201ENST00000393647 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
AC004884.1-201ENST00000393647 SSFA2P28290 1259 aa16.73■□□□□ 0.27
AC004884.1-201ENST00000393647 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 RTCBQ9Y3I0 505 aaKnown RBP16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 NPC1L1Q9UHC9 1359 aa16.72■□□□□ 0.27
AC004884.1-201ENST00000393647 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
AC004884.1-201ENST00000393647 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
AC004884.1-201ENST00000393647 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
AC004884.1-201ENST00000393647 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
AC004884.1-201ENST00000393647 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
AC004884.1-201ENST00000393647 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
AC004884.1-201ENST00000393647 RPS6KA4O75676 772 aa16.69■□□□□ 0.26
AC004884.1-201ENST00000393647 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
AC004884.1-201ENST00000393647 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
AC004884.1-201ENST00000393647 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
AC004884.1-201ENST00000393647 CRKLP46109 303 aaKnown RBP16.68■□□□□ 0.26
AC004884.1-201ENST00000393647 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
AC004884.1-201ENST00000393647 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
AC004884.1-201ENST00000393647 MMP10P09238 476 aa16.67■□□□□ 0.26
AC004884.1-201ENST00000393647 RFC4P35249 363 aa16.67■□□□□ 0.26
AC004884.1-201ENST00000393647 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
AC004884.1-201ENST00000393647 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
AC004884.1-201ENST00000393647 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
AC004884.1-201ENST00000393647 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
AC004884.1-201ENST00000393647 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
AC004884.1-201ENST00000393647 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
AC004884.1-201ENST00000393647 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
AC004884.1-201ENST00000393647 GYS1P13807 737 aa16.65■□□□□ 0.26
AC004884.1-201ENST00000393647 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
AC004884.1-201ENST00000393647 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
AC004884.1-201ENST00000393647 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
AC004884.1-201ENST00000393647 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
AC004884.1-201ENST00000393647 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
AC004884.1-201ENST00000393647 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
AC004884.1-201ENST00000393647 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
AC004884.1-201ENST00000393647 KCNQ3O43525 872 aa16.62■□□□□ 0.25
AC004884.1-201ENST00000393647 CYP19A1P11511 503 aaPredicted RBP16.62■□□□□ 0.25
AC004884.1-201ENST00000393647 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
AC004884.1-201ENST00000393647 CCDC87Q9NVE4 849 aa16.62■□□□□ 0.25
AC004884.1-201ENST00000393647 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
AC004884.1-201ENST00000393647 TEFQ10587 303 aa16.61■□□□□ 0.25
AC004884.1-201ENST00000393647 FKBP8Q14318 412 aa16.61■□□□□ 0.25
AC004884.1-201ENST00000393647 COL5A3P25940 1745 aaPredicted RBP16.61■□□□□ 0.25
AC004884.1-201ENST00000393647 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
AC004884.1-201ENST00000393647 ADRA2BP18089 450 aa16.6■□□□□ 0.25
AC004884.1-201ENST00000393647 CANXP27824 592 aaKnown RBP16.6■□□□□ 0.25
AC004884.1-201ENST00000393647 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
AC004884.1-201ENST00000393647 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
AC004884.1-201ENST00000393647 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 MCM10Q7L590 875 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 TJP1Q07157 1748 aa16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
AC004884.1-201ENST00000393647 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.24
AC004884.1-201ENST00000393647 CHD4Q14839 1912 aa16.57■□□□□ 0.24
AC004884.1-201ENST00000393647 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
AC004884.1-201ENST00000393647 FCHSD2O94868 740 aa16.57■□□□□ 0.24
AC004884.1-201ENST00000393647 DDR1Q08345 913 aa16.57■□□□□ 0.24
AC004884.1-201ENST00000393647 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
AC004884.1-201ENST00000393647 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
AC004884.1-201ENST00000393647 MRC1P22897 1456 aa16.56■□□□□ 0.24
AC004884.1-201ENST00000393647 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
AC004884.1-201ENST00000393647 ZPR1O75312 459 aa16.56■□□□□ 0.24
AC004884.1-201ENST00000393647 DPEP1P16444 411 aa16.56■□□□□ 0.24
AC004884.1-201ENST00000393647 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 TM4SF1P30408 202 aa16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
AC004884.1-201ENST00000393647 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
AC004884.1-201ENST00000393647 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms