RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 SIK1P57059 783 aa27.48■■□□□ 1.99
CDCA4-202ENST00000392590 RTF1Q92541 710 aaKnown RBP27.48■■□□□ 1.99
CDCA4-202ENST00000392590 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
CDCA4-202ENST00000392590 TEFQ10587 303 aa27.46■■□□□ 1.99
CDCA4-202ENST00000392590 AKT1S1Q96B36 256 aa27.46■■□□□ 1.99
CDCA4-202ENST00000392590 RBM42Q9BTD8 480 aaKnown RBP27.46■■□□□ 1.99
CDCA4-202ENST00000392590 LY75O60449 1722 aa27.45■■□□□ 1.98
CDCA4-202ENST00000392590 HTATSF1O43719 755 aaKnown RBP27.45■■□□□ 1.98
CDCA4-202ENST00000392590 ZNF827Q17R98 1081 aa27.45■■□□□ 1.98
CDCA4-202ENST00000392590 ATP6V1AP38606 617 aa27.44■■□□□ 1.98
CDCA4-202ENST00000392590 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
CDCA4-202ENST00000392590 CCDC184Q52MB2 194 aa27.43■■□□□ 1.98
CDCA4-202ENST00000392590 SCN11AQ9UI33 1791 aa27.43■■□□□ 1.98
CDCA4-202ENST00000392590 PTCD1O75127 700 aaKnown RBP27.42■■□□□ 1.98
CDCA4-202ENST00000392590 MCM10Q7L590 875 aa27.42■■□□□ 1.98
CDCA4-202ENST00000392590 CCDC146Q8IYE0 955 aa27.41■■□□□ 1.98
CDCA4-202ENST00000392590 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
CDCA4-202ENST00000392590 CEMIPQ8WUJ3 1361 aa27.41■■□□□ 1.98
CDCA4-202ENST00000392590 MRC1P22897 1456 aa27.41■■□□□ 1.98
CDCA4-202ENST00000392590 SLC39A6Q13433 755 aa27.41■■□□□ 1.98
CDCA4-202ENST00000392590 PAPPAQ13219 1627 aa27.4■■□□□ 1.98
CDCA4-202ENST00000392590 ITPK1Q13572 414 aa27.4■■□□□ 1.98
CDCA4-202ENST00000392590 DCTN1Q14203 1278 aa27.4■■□□□ 1.98
CDCA4-202ENST00000392590 RUNDC1Q96C34 613 aa27.4■■□□□ 1.98
CDCA4-202ENST00000392590 ADAMTS7Q9UKP4 1686 aa27.4■■□□□ 1.98
CDCA4-202ENST00000392590 SLC4A9Q96Q91 983 aa27.39■■□□□ 1.98
CDCA4-202ENST00000392590 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
CDCA4-202ENST00000392590 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
CDCA4-202ENST00000392590 PDGFDQ9GZP0 370 aaPredicted RBP27.37■■□□□ 1.97
CDCA4-202ENST00000392590 RIPK4P57078 832 aa27.36■■□□□ 1.97
CDCA4-202ENST00000392590 TTC5Q8N0Z6 440 aa27.36■■□□□ 1.97
CDCA4-202ENST00000392590 TMPOP42166 694 aaKnown RBP27.36■■□□□ 1.97
CDCA4-202ENST00000392590 BTBD11A6QL63 1104 aa27.35■■□□□ 1.97
CDCA4-202ENST00000392590 AK7Q96M32 723 aa27.35■■□□□ 1.97
CDCA4-202ENST00000392590 ZNF790Q6PG37 636 aa27.33■■□□□ 1.97
CDCA4-202ENST00000392590 NEUROD2Q15784 382 aa27.32■■□□□ 1.96
CDCA4-202ENST00000392590 PNISRQ8TF01 805 aaKnown RBP27.32■■□□□ 1.96
CDCA4-202ENST00000392590 RRP7AQ9Y3A4 280 aaKnown RBP27.32■■□□□ 1.96
CDCA4-202ENST00000392590 PNPLA7Q6ZV29 1317 aa27.32■■□□□ 1.96
CDCA4-202ENST00000392590 LMOD3Q0VAK6 560 aa27.31■■□□□ 1.96
CDCA4-202ENST00000392590 TAF7Q15545 349 aaPredicted RBP27.31■■□□□ 1.96
CDCA4-202ENST00000392590 ZBTB7AO95365 584 aa27.3■■□□□ 1.96
CDCA4-202ENST00000392590 THUMPD2Q9BTF0 503 aaKnown RBP27.3■■□□□ 1.96
CDCA4-202ENST00000392590 C5P01031 1676 aa27.3■■□□□ 1.96
CDCA4-202ENST00000392590 VSIG10Q8N0Z9 540 aa27.29■■□□□ 1.96
CDCA4-202ENST00000392590 FLAD1Q8NFF5 587 aa27.29■■□□□ 1.96
CDCA4-202ENST00000392590 SPON1Q9HCB6 807 aa27.29■■□□□ 1.96
CDCA4-202ENST00000392590 MSH5O43196 834 aa27.28■■□□□ 1.96
CDCA4-202ENST00000392590 RC3H1Q5TC82 1133 aaKnown RBP27.28■■□□□ 1.96
CDCA4-202ENST00000392590 ZNF496Q96IT1 587 aaPredicted RBP27.28■■□□□ 1.96
CDCA4-202ENST00000392590 GNPATO15228 680 aa27.27■■□□□ 1.96
CDCA4-202ENST00000392590 KCNQ3O43525 872 aa27.27■■□□□ 1.96
CDCA4-202ENST00000392590 COL23A1Q86Y22 540 aaPredicted RBP27.27■■□□□ 1.96
CDCA4-202ENST00000392590 DNAJC10Q8IXB1 793 aa27.27■■□□□ 1.96
CDCA4-202ENST00000392590 C4BP0C0L5 1744 aa27.26■■□□□ 1.96
CDCA4-202ENST00000392590 VIRMAQ69YN4 1812 aaKnown RBP27.26■■□□□ 1.95
CDCA4-202ENST00000392590 CNTNAP4Q9C0A0 1308 aa27.26■■□□□ 1.95
CDCA4-202ENST00000392590 PHF14O94880 888 aa27.26■■□□□ 1.95
CDCA4-202ENST00000392590 SLC16A10Q8TF71 515 aa27.26■■□□□ 1.95
CDCA4-202ENST00000392590 FMNL2Q96PY5 1086 aa27.26■■□□□ 1.95
CDCA4-202ENST00000392590 MTFR1LQ9H019 292 aa27.26■■□□□ 1.95
CDCA4-202ENST00000392590 ATF5Q9Y2D1 282 aaPredicted RBP27.26■■□□□ 1.95
CDCA4-202ENST00000392590 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
CDCA4-202ENST00000392590 APAF1O14727 1248 aa27.25■■□□□ 1.95
CDCA4-202ENST00000392590 AMIGO3Q86WK7 504 aa27.25■■□□□ 1.95
CDCA4-202ENST00000392590 MIS18AQ9NYP9 233 aa27.25■■□□□ 1.95
CDCA4-202ENST00000392590 ZNF831Q5JPB2 1677 aa27.24■■□□□ 1.95
CDCA4-202ENST00000392590 TAF1LQ8IZX4 1826 aa27.24■■□□□ 1.95
CDCA4-202ENST00000392590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.24■■□□□ 1.95
CDCA4-202ENST00000392590 SSFA2P28290 1259 aa27.24■■□□□ 1.95
CDCA4-202ENST00000392590 CRKLP46109 303 aaKnown RBP27.24■■□□□ 1.95
CDCA4-202ENST00000392590 SMIM5Q71RC9 77 aa27.24■■□□□ 1.95
CDCA4-202ENST00000392590 RTCBQ9Y3I0 505 aaKnown RBP27.24■■□□□ 1.95
CDCA4-202ENST00000392590 CASZ1Q86V15 1759 aa27.23■■□□□ 1.95
CDCA4-202ENST00000392590 HEG1Q9ULI3 1381 aa27.23■■□□□ 1.95
CDCA4-202ENST00000392590 TRIM35Q9UPQ4 493 aa27.22■■□□□ 1.95
CDCA4-202ENST00000392590 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
CDCA4-202ENST00000392590 RPS6KA4O75676 772 aa27.21■■□□□ 1.95
CDCA4-202ENST00000392590 CYP19A1P11511 503 aaPredicted RBP27.21■■□□□ 1.95
CDCA4-202ENST00000392590 TEX13AQ9BXU3 409 aaPredicted RBP27.21■■□□□ 1.95
CDCA4-202ENST00000392590 DLG5Q8TDM6 1919 aa27.21■■□□□ 1.95
CDCA4-202ENST00000392590 STARD3NLO95772 234 aa27.2■■□□□ 1.94
CDCA4-202ENST00000392590 TRAPPC3LQ5T215 181 aa27.2■■□□□ 1.94
CDCA4-202ENST00000392590 INTS5Q6P9B9 1019 aaKnown RBP27.2■■□□□ 1.94
CDCA4-202ENST00000392590 CCDC87Q9NVE4 849 aa27.19■■□□□ 1.94
CDCA4-202ENST00000392590 FAM9BQ8IZU0 186 aa27.18■■□□□ 1.94
CDCA4-202ENST00000392590 PTGER2P43116 358 aa27.17■■□□□ 1.94
CDCA4-202ENST00000392590 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
CDCA4-202ENST00000392590 QSER1Q2KHR3 1735 aa27.17■■□□□ 1.94
CDCA4-202ENST00000392590 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
CDCA4-202ENST00000392590 ADRA2BP18089 450 aa27.16■■□□□ 1.94
CDCA4-202ENST00000392590 PPP1R1BQ9UD71 204 aaPredicted RBP27.16■■□□□ 1.94
CDCA4-202ENST00000392590 LRP5O75197 1615 aa27.16■■□□□ 1.94
CDCA4-202ENST00000392590 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
CDCA4-202ENST00000392590 ARHGEF1Q92888 912 aaKnown RBP27.16■■□□□ 1.94
CDCA4-202ENST00000392590 BABAM1Q9NWV8 329 aa27.16■■□□□ 1.94
CDCA4-202ENST00000392590 TSPYL4Q9UJ04 414 aa27.16■■□□□ 1.94
CDCA4-202ENST00000392590 TJP1Q07157 1748 aa27.15■■□□□ 1.94
CDCA4-202ENST00000392590 SRCAPQ6ZRS2 3230 aa27.15■■□□□ 1.94
CDCA4-202ENST00000392590 TUBGCP6Q96RT7 1819 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms