RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 CCER2I3L3R5 266 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
UBBP1-201ENST00000392399 CABP4P57796 275 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 RTF1Q92541 710 aaKnown RBP8.94□□□□□ -0.98
UBBP1-201ENST00000392399 SMARCC1Q92922 1105 aaPredicted RBP8.94□□□□□ -0.98
UBBP1-201ENST00000392399 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 CAMKK2Q96RR4 588 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 TMOD3Q9NYL9 352 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 SHANK3Q9BYB0 1731 aa8.94□□□□□ -0.98
UBBP1-201ENST00000392399 EN1Q05925 392 aaPredicted RBP8.93□□□□□ -0.98
UBBP1-201ENST00000392399 NFE2L2Q16236 605 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 CCDC184Q52MB2 194 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 DEFB132Q7Z7B7 95 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 PIGBQ92521 554 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 MAP3K5Q99683 1374 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 SBF2Q86WG5 1849 aa8.93□□□□□ -0.98
UBBP1-201ENST00000392399 LMOD3Q0VAK6 560 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 TEFQ10587 303 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 PTF1AQ7RTS3 328 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 IL17REQ8NFR9 667 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 LGR6Q9HBX8 967 aa8.92□□□□□ -0.98
UBBP1-201ENST00000392399 NHSQ6T4R5 1651 aa8.91□□□□□ -0.98
UBBP1-201ENST00000392399 KDM6AO15550 1401 aaPredicted RBP8.91□□□□□ -0.98
UBBP1-201ENST00000392399 TMPOP42166 694 aaKnown RBP8.91□□□□□ -0.98
UBBP1-201ENST00000392399 RIPK4P57078 832 aa8.91□□□□□ -0.98
UBBP1-201ENST00000392399 EZH2Q15910 746 aaKnown RBP8.91□□□□□ -0.98
UBBP1-201ENST00000392399 TXNRD1Q16881 649 aa8.91□□□□□ -0.98
UBBP1-201ENST00000392399 CEMIPQ8WUJ3 1361 aa8.9□□□□□ -0.98
UBBP1-201ENST00000392399 CCDC146Q8IYE0 955 aa8.9□□□□□ -0.98
UBBP1-201ENST00000392399 PROM2Q8N271 834 aa8.9□□□□□ -0.98
UBBP1-201ENST00000392399 NGEFQ8N5V2 710 aa8.9□□□□□ -0.98
UBBP1-201ENST00000392399 ATG3Q9NT62 314 aa8.9□□□□□ -0.98
UBBP1-201ENST00000392399 TNS1Q9HBL0 1735 aaKnown RBP8.89□□□□□ -0.99
UBBP1-201ENST00000392399 PITPNM1O00562 1244 aa8.89□□□□□ -0.99
UBBP1-201ENST00000392399 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
UBBP1-201ENST00000392399 NBPF14Q5TI25 921 aa8.89□□□□□ -0.99
UBBP1-201ENST00000392399 ASAP1Q9ULH1 1129 aa8.89□□□□□ -0.99
UBBP1-201ENST00000392399 DOT1LQ8TEK3 1739 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 PALLDQ8WX93 1383 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 APAF1O14727 1248 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 MCM10Q7L590 875 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 CCNL1Q9UK58 526 aaPredicted RBP8.88□□□□□ -0.99
UBBP1-201ENST00000392399 RGPD3A6NKT7 1758 aaPredicted RBP8.88□□□□□ -0.99
UBBP1-201ENST00000392399 RGPD4Q7Z3J3 1758 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 ADAMTS7Q9UKP4 1686 aa8.88□□□□□ -0.99
UBBP1-201ENST00000392399 BTAF1O14981 1849 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 SCN11AQ9UI33 1791 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 LOC102724428A0A0B4J2F2 783 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 BTBD11A6QL63 1104 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 SIK1P57059 783 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 CALD1Q05682 793 aaKnown RBP8.87□□□□□ -0.99
UBBP1-201ENST00000392399 DCTN1Q14203 1278 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 TTC5Q8N0Z6 440 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 MIER1Q8N108 512 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 MRC1P22897 1456 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 ITGB4P16144 1822 aa8.87□□□□□ -0.99
UBBP1-201ENST00000392399 TOGARAM1Q9Y4F4 1720 aa8.86□□□□□ -0.99
UBBP1-201ENST00000392399 VSIG10Q8N0Z9 540 aa8.86□□□□□ -0.99
UBBP1-201ENST00000392399 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
UBBP1-201ENST00000392399 LRRC4BQ9NT99 713 aa8.86□□□□□ -0.99
UBBP1-201ENST00000392399 TRIM35Q9UPQ4 493 aa8.86□□□□□ -0.99
UBBP1-201ENST00000392399 PTCD1O75127 700 aaKnown RBP8.85□□□□□ -0.99
UBBP1-201ENST00000392399 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
UBBP1-201ENST00000392399 SLC39A6Q13433 755 aa8.85□□□□□ -0.99
UBBP1-201ENST00000392399 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
UBBP1-201ENST00000392399 STK32BQ9NY57 414 aa8.85□□□□□ -0.99
UBBP1-201ENST00000392399 SSUH2Q9Y2M2 353 aa8.85□□□□□ -0.99
UBBP1-201ENST00000392399 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
UBBP1-201ENST00000392399 SLC15A2Q16348 729 aa8.84□□□□□ -0.99
UBBP1-201ENST00000392399 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
UBBP1-201ENST00000392399 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
UBBP1-201ENST00000392399 LY75O60449 1722 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 CHL1O00533 1208 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 STARD3NLO95772 234 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
UBBP1-201ENST00000392399 FLAD1Q8NFF5 587 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 ZNF496Q96IT1 587 aaPredicted RBP8.83□□□□□ -1
UBBP1-201ENST00000392399 CFAP44Q96MT7 982 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
UBBP1-201ENST00000392399 THUMPD2Q9BTF0 503 aaKnown RBP8.83□□□□□ -1
UBBP1-201ENST00000392399 IL16Q14005 1332 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 RREB1Q92766 1687 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 SNRPA1P09661 255 aaKnown RBP8.82□□□□□ -1
UBBP1-201ENST00000392399 GNAI1P63096 354 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 ITPK1Q13572 414 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 WDR63Q8IWG1 891 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 WWC1Q8IX03 1113 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 IFT57Q9NWB7 429 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 TSPYL4Q9UJ04 414 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 HEG1Q9ULI3 1381 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms