RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 PIP4K2BP78356 416 aa15.56■□□□□ 0.08
TMCO1-202ENST00000392129 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
TMCO1-202ENST00000392129 BTG4Q9NY30 223 aa15.56■□□□□ 0.08
TMCO1-202ENST00000392129 ADAMTS7Q9UKP4 1686 aa15.55■□□□□ 0.08
TMCO1-202ENST00000392129 ZBTB7BO15156 539 aaPredicted RBP15.55■□□□□ 0.08
TMCO1-202ENST00000392129 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
TMCO1-202ENST00000392129 HOXB7P09629 217 aa15.55■□□□□ 0.08
TMCO1-202ENST00000392129 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
TMCO1-202ENST00000392129 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
TMCO1-202ENST00000392129 IL2RBP14784 551 aa15.55■□□□□ 0.08
TMCO1-202ENST00000392129 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
TMCO1-202ENST00000392129 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
TMCO1-202ENST00000392129 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
TMCO1-202ENST00000392129 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
TMCO1-202ENST00000392129 RGS12O14924 1447 aa15.54■□□□□ 0.08
TMCO1-202ENST00000392129 G2E3Q7L622 706 aa15.54■□□□□ 0.08
TMCO1-202ENST00000392129 RWDD1Q9H446 243 aaPredicted RBP15.54■□□□□ 0.08
TMCO1-202ENST00000392129 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
TMCO1-202ENST00000392129 NECTIN2Q92692 538 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 CHMP4AQ9BY43 222 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 KDM3BQ7LBC6 1761 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 PKD1L3Q7Z443 1732 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 NFATC2IPQ8NCF5 419 aa15.53■□□□□ 0.08
TMCO1-202ENST00000392129 HEG1Q9ULI3 1381 aa15.52■□□□□ 0.08
TMCO1-202ENST00000392129 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.07
TMCO1-202ENST00000392129 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
TMCO1-202ENST00000392129 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
TMCO1-202ENST00000392129 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
TMCO1-202ENST00000392129 FLIIQ13045 1269 aa15.51■□□□□ 0.07
TMCO1-202ENST00000392129 HDAC1Q13547 482 aaPredicted RBP15.51■□□□□ 0.07
TMCO1-202ENST00000392129 SKAP1Q86WV1 359 aa15.51■□□□□ 0.07
TMCO1-202ENST00000392129 VIRMAQ69YN4 1812 aaKnown RBP15.51■□□□□ 0.07
TMCO1-202ENST00000392129 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
TMCO1-202ENST00000392129 EIF2S2P20042 333 aaKnown RBP15.51■□□□□ 0.07
TMCO1-202ENST00000392129 COL14A1Q05707 1796 aaKnown RBP15.5■□□□□ 0.07
TMCO1-202ENST00000392129 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
TMCO1-202ENST00000392129 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
TMCO1-202ENST00000392129 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
TMCO1-202ENST00000392129 SIPA1L3O60292 1781 aaPredicted RBP15.5■□□□□ 0.07
TMCO1-202ENST00000392129 PARP4Q9UKK3 1724 aaKnown RBP15.49■□□□□ 0.07
TMCO1-202ENST00000392129 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
TMCO1-202ENST00000392129 SLC39A6Q13433 755 aa15.49■□□□□ 0.07
TMCO1-202ENST00000392129 MRC1P22897 1456 aa15.48■□□□□ 0.07
TMCO1-202ENST00000392129 F6X3S4 739 aa15.48■□□□□ 0.07
TMCO1-202ENST00000392129 ADAMTS2O95450 1211 aa15.48■□□□□ 0.07
TMCO1-202ENST00000392129 CABP4P57796 275 aa15.48■□□□□ 0.07
TMCO1-202ENST00000392129 FKBP5Q13451 457 aaPredicted RBP15.48■□□□□ 0.07
TMCO1-202ENST00000392129 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
TMCO1-202ENST00000392129 CACNA1FO60840 1977 aa15.47■□□□□ 0.07
TMCO1-202ENST00000392129 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
TMCO1-202ENST00000392129 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
TMCO1-202ENST00000392129 PHAXQ9H814 394 aaKnown RBP15.47■□□□□ 0.07
TMCO1-202ENST00000392129 CHPF2Q9P2E5 772 aa15.47■□□□□ 0.07
TMCO1-202ENST00000392129 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
TMCO1-202ENST00000392129 SLC4A10Q6U841 1118 aa15.46■□□□□ 0.07
TMCO1-202ENST00000392129 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.07
TMCO1-202ENST00000392129 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
TMCO1-202ENST00000392129 NUTM2BA6NNL0 878 aaPredicted RBP15.45■□□□□ 0.06
TMCO1-202ENST00000392129 NUTM2EB1AL46 878 aaPredicted RBP15.45■□□□□ 0.06
TMCO1-202ENST00000392129 NUTM2AQ8IVF1 878 aaPredicted RBP15.45■□□□□ 0.06
TMCO1-202ENST00000392129 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
TMCO1-202ENST00000392129 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
TMCO1-202ENST00000392129 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
TMCO1-202ENST00000392129 RGS3P49796 1198 aa15.44■□□□□ 0.06
TMCO1-202ENST00000392129 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
TMCO1-202ENST00000392129 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
TMCO1-202ENST00000392129 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
TMCO1-202ENST00000392129 SIRT2Q8IXJ6 389 aa15.43■□□□□ 0.06
TMCO1-202ENST00000392129 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
TMCO1-202ENST00000392129 MEIS3Q99687 375 aa15.43■□□□□ 0.06
TMCO1-202ENST00000392129 ANXA1P04083 346 aa15.42■□□□□ 0.06
TMCO1-202ENST00000392129 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
TMCO1-202ENST00000392129 FMNL2Q96PY5 1086 aa15.42■□□□□ 0.06
TMCO1-202ENST00000392129 DDX21Q9NR30 783 aaKnown RBP eCLIP15.41■□□□□ 0.06
TMCO1-202ENST00000392129 SHANK3Q9BYB0 1731 aa15.41■□□□□ 0.06
TMCO1-202ENST00000392129 PDIA6Q15084 440 aa15.41■□□□□ 0.06
TMCO1-202ENST00000392129 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
TMCO1-202ENST00000392129 HYPKQ9NX55 129 aa15.41■□□□□ 0.06
TMCO1-202ENST00000392129 PI4KAP2A4QPH2 592 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 EXOC5O00471 708 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 PDE4AP27815 886 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
TMCO1-202ENST00000392129 PI4KAP1Q8N8J0 262 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 THRAP3Q9Y2W1 955 aaKnown RBP15.4■□□□□ 0.06
TMCO1-202ENST00000392129 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 JCADQ9P266 1359 aa15.4■□□□□ 0.06
TMCO1-202ENST00000392129 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 PLCH1Q4KWH8 1693 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 DNAAF4Q8WXU2 420 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 CDCA7Q9BWT1 371 aaPredicted RBP15.39■□□□□ 0.05
TMCO1-202ENST00000392129 BACH2Q9BYV9 841 aa15.39■□□□□ 0.05
TMCO1-202ENST00000392129 CEP85Q6P2H3 762 aa15.38■□□□□ 0.05
TMCO1-202ENST00000392129 SLIT2O94813 1529 aa15.38■□□□□ 0.05
TMCO1-202ENST00000392129 GNAI3P08754 354 aa15.37■□□□□ 0.05
TMCO1-202ENST00000392129 SRCIN1Q9C0H9 1055 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms