RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SCAPERQ9BY12 1400 aa18.81■□□□□ 0.6
SHANK1-204ENST00000391814 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
SHANK1-204ENST00000391814 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
SHANK1-204ENST00000391814 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.81■□□□□ 0.6
SHANK1-204ENST00000391814 V9GYY5 206 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-204ENST00000391814 IMMTQ16891 758 aaKnown RBP18.81■□□□□ 0.6
SHANK1-204ENST00000391814 CDKL5O76039 1030 aa18.81■□□□□ 0.6
SHANK1-204ENST00000391814 MAATS1Q7Z4T9 603 aa18.81■□□□□ 0.6
SHANK1-204ENST00000391814 PPP1R1BQ9UD71 204 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-204ENST00000391814 GUCY1B3Q02153 619 aa18.8■□□□□ 0.6
SHANK1-204ENST00000391814 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
SHANK1-204ENST00000391814 CCDC171Q6TFL3 1326 aa18.8■□□□□ 0.6
SHANK1-204ENST00000391814 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
SHANK1-204ENST00000391814 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.6
SHANK1-204ENST00000391814 ERBINQ96RT1 1412 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
SHANK1-204ENST00000391814 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
SHANK1-204ENST00000391814 CEP63Q96MT8 703 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 GCOM1H8Y6P7 765 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-204ENST00000391814 CCDC175P0C221 793 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 MYZAPP0CAP1 466 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 GIMAP6Q6P9H5 292 aa18.79■□□□□ 0.6
SHANK1-204ENST00000391814 CCDC12Q8WUD4 166 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-204ENST00000391814 PIBF1Q8WXW3 757 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 SCAND2PQ9GZW5 306 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-204ENST00000391814 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-204ENST00000391814 GJB2P29033 226 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 C10orf67Q8IYJ2 551 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 SMC1AQ14683 1233 aaKnown RBP18.78■□□□□ 0.6
SHANK1-204ENST00000391814 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
SHANK1-204ENST00000391814 GIGYF2Q6Y7W6 1299 aaKnown RBP18.78■□□□□ 0.6
SHANK1-204ENST00000391814 BIN1O00499 593 aa18.77■□□□□ 0.6
SHANK1-204ENST00000391814 HSF2BPO75031 334 aa18.77■□□□□ 0.6
SHANK1-204ENST00000391814 CTAGE5O15320 804 aa18.77■□□□□ 0.6
SHANK1-204ENST00000391814 RRAGDQ9NQL2 400 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-204ENST00000391814 SSR1P43307 286 aaKnown RBP18.77■□□□□ 0.6
SHANK1-204ENST00000391814 CEP131Q9UPN4 1083 aa18.77■□□□□ 0.6
SHANK1-204ENST00000391814 VGLL3A8MV65 326 aa18.77■□□□□ 0.59
SHANK1-204ENST00000391814 KRT32Q14532 448 aa18.77■□□□□ 0.59
SHANK1-204ENST00000391814 ISM2Q6H9L7 571 aa18.76■□□□□ 0.59
SHANK1-204ENST00000391814 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
SHANK1-204ENST00000391814 CCDC150Q8NCX0 1101 aa18.76■□□□□ 0.59
SHANK1-204ENST00000391814 ZKSCAN5Q9Y2L8 839 aa18.76■□□□□ 0.59
SHANK1-204ENST00000391814 SSBP05455 408 aaKnown RBP eCLIP18.76■□□□□ 0.59
SHANK1-204ENST00000391814 GNG11P61952 73 aa18.76■□□□□ 0.59
SHANK1-204ENST00000391814 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
SHANK1-204ENST00000391814 FSIP1Q8NA03 581 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 DDX19AQ9NUU7 478 aaKnown RBP18.75■□□□□ 0.59
SHANK1-204ENST00000391814 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 IGHDP01880 384 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 MX1P20591 662 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHANK1-204ENST00000391814 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 HLTFQ14527 1009 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHANK1-204ENST00000391814 OGFRQ9NZT2 677 aa18.75■□□□□ 0.59
SHANK1-204ENST00000391814 PDIA4P13667 645 aaKnown RBP18.74■□□□□ 0.59
SHANK1-204ENST00000391814 CCDC97Q96F63 343 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-204ENST00000391814 VPS18Q9P253 973 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 TBC1D9Q6ZT07 1266 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 CNNM1Q9NRU3 951 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 YEATS4O95619 227 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 HSPA4P34932 840 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 PAFAH1B1P43034 410 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 PSME1Q06323 249 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 FKBP15Q5T1M5 1219 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 MCM6Q14566 821 aa18.74■□□□□ 0.59
SHANK1-204ENST00000391814 CAPN2P17655 700 aa18.73■□□□□ 0.59
SHANK1-204ENST00000391814 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
SHANK1-204ENST00000391814 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHANK1-204ENST00000391814 TFIP11Q9UBB9 837 aaKnown RBP18.73■□□□□ 0.59
SHANK1-204ENST00000391814 UBE2HP62256 183 aa18.73■□□□□ 0.59
SHANK1-204ENST00000391814 STX6O43752 255 aa18.73■□□□□ 0.59
SHANK1-204ENST00000391814 ANO6Q4KMQ2 910 aa18.73■□□□□ 0.59
SHANK1-204ENST00000391814 TTC12Q9H892 705 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-204ENST00000391814 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-204ENST00000391814 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 SH2B1Q9NRF2 756 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-204ENST00000391814 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
SHANK1-204ENST00000391814 WASF1Q92558 559 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 CACNA2D4Q7Z3S7 1137 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 FYCO1Q9BQS8 1478 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 ARFGAP3Q9NP61 516 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 RARSP54136 660 aaKnown RBP18.72■□□□□ 0.59
SHANK1-204ENST00000391814 SPECC1LQ69YQ0 1117 aa18.72■□□□□ 0.59
SHANK1-204ENST00000391814 GOLGA6L9A6NEM1 432 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-204ENST00000391814 CNNM3Q8NE01 707 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 CNPY2Q9Y2B0 182 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 TDO2P48775 406 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 ZNF165P49910 485 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms