RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 BIN1O00499 593 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 ZNF362Q5T0B9 420 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 BSPRYQ5W0U4 402 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 SHISA2Q6UWI4 295 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 RNF135Q8IUD6 432 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 TMEM40Q8WWA1 233 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 CDCA7LQ96GN5 454 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 GMCL1Q96IK5 515 aa0.66□□□□□ -2.3
RNU6-1250P-201ENST00000391218 PLEKHG3A1L390 1219 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PHF14O94880 888 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 IGLV1-40P01703 118 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FUT4P22083 530 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KRTAP27-1Q3LI81 207 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 EPHA10Q5JZY3 1008 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 SYDE1Q6ZW31 735 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 CCDC24Q8N4L8 307 aa0.65□□□□□ -2.31
RNU6-1250P-201ENST00000391218 CTGFP29279 349 aa0.64□□□□□ -2.31
RNU6-1250P-201ENST00000391218 TIGD5Q53EQ6 642 aa0.64□□□□□ -2.31
RNU6-1250P-201ENST00000391218 WASF1Q92558 559 aa0.64□□□□□ -2.31
RNU6-1250P-201ENST00000391218 USP21Q9UK80 565 aa0.64□□□□□ -2.31
RNU6-1250P-201ENST00000391218 INHBEP58166 350 aa0.63□□□□□ -2.31
RNU6-1250P-201ENST00000391218 MLANAQ16655 118 aa0.63□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NEURL1BA8MQ27 555 aa0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 CTSOP43234 321 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NANOS3P60323 173 aaKnown RBP0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PRPF38BQ5VTL8 546 aaKnown RBP0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 HHIPL2Q6UWX4 724 aa0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 LENG1Q96BZ8 264 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NFIBO00712 420 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 SPINT1O43278 529 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KRT1P04264 644 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KCNA4P22459 653 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 ACVRL1P37023 503 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NFXL1Q6ZNB6 911 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 SHISA4Q96DD7 197 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 THAP11Q96EK4 314 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FBXL18Q96ME1 805 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 GPHNQ9NQX3 736 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 ADAMTS20P59510 1910 aa0.61□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NUAK1O60285 661 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 NR3C2P08235 984 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 TACR2P21452 398 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PRSS12P56730 875 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FOXD4L5Q5VV16 416 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 Q8N1X5 172 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FOXD4L4Q8WXT5 416 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 MEGF10Q96KG7 1140 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KCNC2Q96PR1 638 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KRTAP4-1Q9BYQ7 146 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PCED1AQ9H1Q7 454 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 CCDC39Q9UFE4 941 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PALD1Q9ULE6 856 aa0.6□□□□□ -2.31
RNU6-1250P-201ENST00000391218 PRR19A6NJB7 356 aa0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 FMNL1O95466 1100 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 BMP4P12644 408 aa0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 IREB2P48200 963 aaKnown RBP0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 KCNA10Q16322 511 aa0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 LCE1AQ5T7P2 110 aa0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 GDF6Q6KF10 455 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 HHIPQ96QV1 700 aa0.59□□□□□ -2.31
RNU6-1250P-201ENST00000391218 C2CD2LO14523 706 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 IKBKBO14920 756 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 HRCP23327 699 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 HOXA10P31260 410 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PLP2Q04941 152 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 RNF217Q8TC41 542 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PIM2Q9P1W9 311 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 HRH3Q9Y5N1 445 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
RNU6-1250P-201ENST00000391218 H7C1W4 665 aa0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 RING1Q06587 406 aa0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 TSR1Q2NL82 804 aaKnown RBP0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PTCRAQ6ISU1 281 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PAXIP1Q6ZW49 1069 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 WFDC12Q8WWY7 111 aa0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 IRF2BPLQ9H1B7 796 aa0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 POLMQ9NP87 494 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1250P-201ENST00000391218 SPTLC1O15269 473 aa0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 SH3BP2P78314 561 aa0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 MSS51Q4VC12 460 aa0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PEAR1Q5VY43 1037 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 INSM2Q96T92 566 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 ING1Q9UK53 422 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1250P-201ENST00000391218 RHOQP17081 205 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 NOS3P29474 1203 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 KLF10Q13118 480 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 DPY19L2P1Q6NXN4 242 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PROM2Q8N271 834 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 ZBTB8BQ8NAP8 495 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 CRAMP1Q96RY5 1269 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 EPAS1Q99814 870 aa0.55□□□□□ -2.32
RNU6-1250P-201ENST00000391218 FCGBPQ9Y6R7 5405 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 PPFIA2O75334 1257 aa0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 GRM7Q14831 915 aa0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 ARID5BQ14865 1188 aa0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 EML3Q32P44 896 aa0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 DNAJC10Q8IXB1 793 aa0.54□□□□□ -2.32
RNU6-1250P-201ENST00000391218 GAS2L1Q99501 681 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms